RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 CCDC88AQ3V6T2 1871 aa22.86■■□□□ 1.25
CIRBP-235ENST00000591935 COL11A2P13942 1736 aaPredicted RBP22.86■■□□□ 1.25
CIRBP-235ENST00000591935 NPHP1O15259 732 aa22.86■■□□□ 1.25
CIRBP-235ENST00000591935 TMPOP42166 694 aaKnown RBP22.86■■□□□ 1.25
CIRBP-235ENST00000591935 KIF3CO14782 793 aa22.85■■□□□ 1.25
CIRBP-235ENST00000591935 CCDC146Q8IYE0 955 aa22.85■■□□□ 1.25
CIRBP-235ENST00000591935 ST5P78524 1137 aa22.84■■□□□ 1.25
CIRBP-235ENST00000591935 NGEFQ8N5V2 710 aa22.84■■□□□ 1.25
CIRBP-235ENST00000591935 CNBD1Q8NA66 436 aa22.84■■□□□ 1.25
CIRBP-235ENST00000591935 RRP7AQ9Y3A4 280 aaKnown RBP22.84■■□□□ 1.25
CIRBP-235ENST00000591935 GTF3C3Q9Y5Q9 886 aa22.84■■□□□ 1.25
CIRBP-235ENST00000591935 RASSF7Q02833 373 aa22.83■■□□□ 1.25
CIRBP-235ENST00000591935 HLFQ16534 295 aa22.83■■□□□ 1.25
CIRBP-235ENST00000591935 ZNF622Q969S3 477 aaKnown RBP eCLIP22.83■■□□□ 1.25
CIRBP-235ENST00000591935 CACNA1SQ13698 1873 aa22.83■■□□□ 1.24
CIRBP-235ENST00000591935 PRELPP51888 382 aa22.82■■□□□ 1.24
CIRBP-235ENST00000591935 RNF181Q9P0P0 153 aa22.82■■□□□ 1.24
CIRBP-235ENST00000591935 NUP98P52948 1817 aa22.82■■□□□ 1.24
CIRBP-235ENST00000591935 LMOD3Q0VAK6 560 aa22.81■■□□□ 1.24
CIRBP-235ENST00000591935 NEUROD2Q15784 382 aa22.81■■□□□ 1.24
CIRBP-235ENST00000591935 TSPYL4Q9UJ04 414 aa22.81■■□□□ 1.24
CIRBP-235ENST00000591935 NBPF5PQ86XG9 351 aaPredicted RBP22.8■■□□□ 1.24
CIRBP-235ENST00000591935 NMRK2Q9NPI5 230 aa22.8■■□□□ 1.24
CIRBP-235ENST00000591935 ADAMTS8Q9UP79 889 aa22.8■■□□□ 1.24
CIRBP-235ENST00000591935 NIP7Q9Y221 180 aaKnown RBP eCLIP22.8■■□□□ 1.24
CIRBP-235ENST00000591935 SLX4Q8IY92 1834 aa22.8■■□□□ 1.24
CIRBP-235ENST00000591935 KDM2BQ8NHM5 1336 aa22.8■■□□□ 1.24
CIRBP-235ENST00000591935 ZC3H4Q9UPT8 1303 aaKnown RBP22.8■■□□□ 1.24
CIRBP-235ENST00000591935 MYL6BP14649 208 aa22.79■■□□□ 1.24
CIRBP-235ENST00000591935 TTLL7Q6ZT98 887 aa22.79■■□□□ 1.24
CIRBP-235ENST00000591935 BABAM1Q9NWV8 329 aa22.79■■□□□ 1.24
CIRBP-235ENST00000591935 ZNF219Q9P2Y4 722 aaPredicted RBP22.79■■□□□ 1.24
CIRBP-235ENST00000591935 CEP350Q5VT06 3117 aa22.78■■□□□ 1.24
CIRBP-235ENST00000591935 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
CIRBP-235ENST00000591935 LMNB1P20700 586 aa22.78■■□□□ 1.24
CIRBP-235ENST00000591935 WDR43Q15061 677 aaKnown RBP eCLIP22.78■■□□□ 1.24
CIRBP-235ENST00000591935 TPTE2Q6XPS3 522 aa22.78■■□□□ 1.24
CIRBP-235ENST00000591935 RUNDC1Q96C34 613 aa22.78■■□□□ 1.24
CIRBP-235ENST00000591935 NFKBIEO00221 500 aa22.77■■□□□ 1.24
CIRBP-235ENST00000591935 C21orf2O43822 256 aa22.77■■□□□ 1.24
CIRBP-235ENST00000591935 SRGNP10124 158 aa22.77■■□□□ 1.24
CIRBP-235ENST00000591935 STYK1Q6J9G0 422 aa22.77■■□□□ 1.24
CIRBP-235ENST00000591935 CNKSR1Q969H4 720 aa22.77■■□□□ 1.24
CIRBP-235ENST00000591935 TRIM35Q9UPQ4 493 aa22.77■■□□□ 1.24
CIRBP-235ENST00000591935 TOMM70O94826 608 aa22.76■■□□□ 1.23
CIRBP-235ENST00000591935 FER1L6Q2WGJ9 1857 aa22.76■■□□□ 1.23
CIRBP-235ENST00000591935 ERVV-1B6SEH8 477 aa22.75■■□□□ 1.23
CIRBP-235ENST00000591935 HSPA6P17066 643 aa22.75■■□□□ 1.23
CIRBP-235ENST00000591935 MASTLQ96GX5 879 aa22.75■■□□□ 1.23
CIRBP-235ENST00000591935 ERBB4Q15303 1308 aa22.75■■□□□ 1.23
CIRBP-235ENST00000591935 MAP3K15Q6ZN16 1313 aa22.75■■□□□ 1.23
CIRBP-235ENST00000591935 ARFGEF2Q9Y6D5 1785 aa22.74■■□□□ 1.23
CIRBP-235ENST00000591935 EIF2S2P20042 333 aaKnown RBP22.74■■□□□ 1.23
CIRBP-235ENST00000591935 PDIA6Q15084 440 aa22.74■■□□□ 1.23
CIRBP-235ENST00000591935 KIF6Q6ZMV9 814 aa22.74■■□□□ 1.23
CIRBP-235ENST00000591935 SOGA3Q5TF21 947 aa22.73■■□□□ 1.23
CIRBP-235ENST00000591935 LRP10Q7Z4F1 713 aa22.73■■□□□ 1.23
CIRBP-235ENST00000591935 C16orf71Q8IYS4 520 aaPredicted RBP22.73■■□□□ 1.23
CIRBP-235ENST00000591935 ZBTB3Q9H5J0 574 aa22.73■■□□□ 1.23
CIRBP-235ENST00000591935 CHL1O00533 1208 aa22.72■■□□□ 1.23
CIRBP-235ENST00000591935 PRPF40BQ6NWY9 871 aaKnown RBP22.72■■□□□ 1.23
CIRBP-235ENST00000591935 DICER1Q9UPY3 1922 aaKnown RBP22.71■■□□□ 1.23
CIRBP-235ENST00000591935 KLRG2A4D1S0 409 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-235ENST00000591935 ANXA1P04083 346 aa22.71■■□□□ 1.23
CIRBP-235ENST00000591935 GTF2E1P29083 439 aaPredicted RBP22.71■■□□□ 1.23
CIRBP-235ENST00000591935 KRT24Q2M2I5 525 aa22.71■■□□□ 1.23
CIRBP-235ENST00000591935 PROSER3Q2NL68 480 aa22.71■■□□□ 1.23
CIRBP-235ENST00000591935 NYXQ9GZU5 481 aa22.71■■□□□ 1.23
CIRBP-235ENST00000591935 RRAGCQ9HB90 399 aa22.71■■□□□ 1.23
CIRBP-235ENST00000591935 LAS1LQ9Y4W2 734 aaKnown RBP22.71■■□□□ 1.23
CIRBP-235ENST00000591935 NPR1P16066 1061 aa22.7■■□□□ 1.22
CIRBP-235ENST00000591935 GPTP24298 496 aa22.7■■□□□ 1.22
CIRBP-235ENST00000591935 NECTIN2Q92692 538 aa22.7■■□□□ 1.22
CIRBP-235ENST00000591935 TIAM2Q8IVF5 1701 aa22.7■■□□□ 1.22
CIRBP-235ENST00000591935 TNRC6CQ9HCJ0 1690 aaKnown RBP22.69■■□□□ 1.22
CIRBP-235ENST00000591935 NUTM1Q86Y26 1132 aa22.69■■□□□ 1.22
CIRBP-235ENST00000591935 RBM46Q8TBY0 533 aaKnown RBP22.69■■□□□ 1.22
CIRBP-235ENST00000591935 UBN2Q6ZU65 1347 aa22.68■■□□□ 1.22
CIRBP-235ENST00000591935 LTBP3Q9NS15 1303 aa22.68■■□□□ 1.22
CIRBP-235ENST00000591935 C7orf43Q8WVR3 580 aa22.68■■□□□ 1.22
CIRBP-235ENST00000591935 ABCC12Q96J65 1359 aa22.67■■□□□ 1.22
CIRBP-235ENST00000591935 GLTPD2A6NH11 291 aa22.67■■□□□ 1.22
CIRBP-235ENST00000591935 ERFEQ4G0M1 354 aa22.67■■□□□ 1.22
CIRBP-235ENST00000591935 SUSD4Q5VX71 490 aa22.67■■□□□ 1.22
CIRBP-235ENST00000591935 GIGYF2Q6Y7W6 1299 aaKnown RBP22.67■■□□□ 1.22
CIRBP-235ENST00000591935 ZNF34Q8IZ26 560 aa22.67■■□□□ 1.22
CIRBP-235ENST00000591935 TAOK3Q9H2K8 898 aa22.67■■□□□ 1.22
CIRBP-235ENST00000591935 MRS2Q9HD23 443 aa22.67■■□□□ 1.22
CIRBP-235ENST00000591935 ALDH1B1P30837 517 aa22.66■■□□□ 1.22
CIRBP-235ENST00000591935 CCDC184Q52MB2 194 aa22.66■■□□□ 1.22
CIRBP-235ENST00000591935 DPY19L2Q6NUT2 758 aa22.66■■□□□ 1.22
CIRBP-235ENST00000591935 OLFM4Q6UX06 510 aa22.65■■□□□ 1.22
CIRBP-235ENST00000591935 IBTKQ9P2D0 1353 aaPredicted RBP22.64■■□□□ 1.22
CIRBP-235ENST00000591935 APAF1O14727 1248 aa22.64■■□□□ 1.21
CIRBP-235ENST00000591935 APLP1P51693 650 aa22.64■■□□□ 1.21
CIRBP-235ENST00000591935 FSTL1Q12841 308 aa22.64■■□□□ 1.21
CIRBP-235ENST00000591935 COPS6Q7L5N1 327 aa22.64■■□□□ 1.21
CIRBP-235ENST00000591935 VEGFAP15692 232 aaPredicted RBP22.63■■□□□ 1.21
CIRBP-235ENST00000591935 AIMP1Q12904 312 aaKnown RBP22.63■■□□□ 1.21
CIRBP-235ENST00000591935 CCDC93Q567U6 631 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms