RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 PRR5LQ6MZQ0 368 aa13.85□□□□□ -0.19
SDF2-209ENST00000591903 PRPF40BQ6NWY9 871 aaKnown RBP13.85□□□□□ -0.19
SDF2-209ENST00000591903 BEGAINQ9BUH8 593 aa13.85□□□□□ -0.19
SDF2-209ENST00000591903 NPHP1O15259 732 aa13.84□□□□□ -0.19
SDF2-209ENST00000591903 ST5P78524 1137 aa13.84□□□□□ -0.19
SDF2-209ENST00000591903 SLC39A6Q13433 755 aa13.84□□□□□ -0.19
SDF2-209ENST00000591903 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
SDF2-209ENST00000591903 MASTLQ96GX5 879 aa13.84□□□□□ -0.19
SDF2-209ENST00000591903 CLEC11AQ9Y240 323 aa13.84□□□□□ -0.19
SDF2-209ENST00000591903 BCORQ6W2J9 1755 aa13.83□□□□□ -0.19
SDF2-209ENST00000591903 RNMTO43148 476 aaKnown RBP13.83□□□□□ -0.2
SDF2-209ENST00000591903 SRGNP10124 158 aa13.83□□□□□ -0.2
SDF2-209ENST00000591903 EPHX2P34913 555 aa13.83□□□□□ -0.2
SDF2-209ENST00000591903 ECE1P42892 770 aa13.83□□□□□ -0.2
SDF2-209ENST00000591903 CCDC93Q567U6 631 aa13.83□□□□□ -0.2
SDF2-209ENST00000591903 CNTROBQ8N137 903 aa13.83□□□□□ -0.2
SDF2-209ENST00000591903 CNBD1Q8NA66 436 aa13.83□□□□□ -0.2
SDF2-209ENST00000591903 ABT1Q9ULW3 272 aaKnown RBP13.83□□□□□ -0.2
SDF2-209ENST00000591903 SETDB2Q96T68 719 aa13.82□□□□□ -0.2
SDF2-209ENST00000591903 LGR6Q9HBX8 967 aa13.82□□□□□ -0.2
SDF2-209ENST00000591903 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
SDF2-209ENST00000591903 FKBP4Q02790 459 aaKnown RBP eCLIP13.81□□□□□ -0.2
SDF2-209ENST00000591903 NPM2Q86SE8 214 aaKnown RBP13.81□□□□□ -0.2
SDF2-209ENST00000591903 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
SDF2-209ENST00000591903 TEX13AQ9BXU3 409 aaPredicted RBP13.81□□□□□ -0.2
SDF2-209ENST00000591903 IL6STP40189 918 aaPredicted RBP13.8□□□□□ -0.2
SDF2-209ENST00000591903 MAP1SQ66K74 1059 aaPredicted RBP13.8□□□□□ -0.2
SDF2-209ENST00000591903 RTKN2Q8IZC4 609 aa13.8□□□□□ -0.2
SDF2-209ENST00000591903 ZNF541Q9H0D2 1346 aa13.8□□□□□ -0.2
SDF2-209ENST00000591903 IL13P35225 146 aa13.79□□□□□ -0.2
SDF2-209ENST00000591903 GPC2Q8N158 579 aa13.79□□□□□ -0.2
SDF2-209ENST00000591903 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
SDF2-209ENST00000591903 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
SDF2-209ENST00000591903 DDX21Q9NR30 783 aaKnown RBP eCLIP13.79□□□□□ -0.2
SDF2-209ENST00000591903 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
SDF2-209ENST00000591903 CA12O43570 354 aa13.78□□□□□ -0.2
SDF2-209ENST00000591903 CAPNS2Q96L46 248 aa13.78□□□□□ -0.2
SDF2-209ENST00000591903 TBC1D2BQ9UPU7 963 aa13.78□□□□□ -0.2
SDF2-209ENST00000591903 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
SDF2-209ENST00000591903 SIPA1L3O60292 1781 aaPredicted RBP13.78□□□□□ -0.2
SDF2-209ENST00000591903 ZNF316A6NFI3 1004 aaPredicted RBP13.77□□□□□ -0.21
SDF2-209ENST00000591903 FZD9O00144 591 aa13.77□□□□□ -0.21
SDF2-209ENST00000591903 NPR1P16066 1061 aa13.77□□□□□ -0.21
SDF2-209ENST00000591903 MAP2K2P36507 400 aa13.77□□□□□ -0.21
SDF2-209ENST00000591903 LTBP1Q14766 1721 aa13.77□□□□□ -0.21
SDF2-209ENST00000591903 PAXIP1Q6ZW49 1069 aaPredicted RBP13.77□□□□□ -0.21
SDF2-209ENST00000591903 MORC1Q86VD1 984 aa13.77□□□□□ -0.21
SDF2-209ENST00000591903 GPR101Q96P66 508 aaPredicted RBP13.77□□□□□ -0.21
SDF2-209ENST00000591903 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.21
SDF2-209ENST00000591903 HEG1Q9ULI3 1381 aa13.77□□□□□ -0.21
SDF2-209ENST00000591903 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.21
SDF2-209ENST00000591903 CASP8AP2Q9UKL3 1982 aa13.76□□□□□ -0.21
SDF2-209ENST00000591903 IARSP41252 1262 aaKnown RBP13.76□□□□□ -0.21
SDF2-209ENST00000591903 CAMTA2O94983 1202 aa13.75□□□□□ -0.21
SDF2-209ENST00000591903 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
SDF2-209ENST00000591903 NBPF5PQ86XG9 351 aaPredicted RBP13.75□□□□□ -0.21
SDF2-209ENST00000591903 JDP2Q8WYK2 163 aa13.75□□□□□ -0.21
SDF2-209ENST00000591903 CFAP44Q96MT7 982 aa13.75□□□□□ -0.21
SDF2-209ENST00000591903 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
SDF2-209ENST00000591903 TNRC18O15417 2968 aaPredicted RBP13.74□□□□□ -0.21
SDF2-209ENST00000591903 KLRG2A4D1S0 409 aaPredicted RBP13.74□□□□□ -0.21
SDF2-209ENST00000591903 CYP4F22Q6NT55 531 aa13.74□□□□□ -0.21
SDF2-209ENST00000591903 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
SDF2-209ENST00000591903 CLEC4GQ6UXB4 293 aa13.74□□□□□ -0.21
SDF2-209ENST00000591903 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
SDF2-209ENST00000591903 PANK3Q9H999 370 aa13.74□□□□□ -0.21
SDF2-209ENST00000591903 ZNF652Q9Y2D9 606 aa13.74□□□□□ -0.21
SDF2-209ENST00000591903 TLL2Q9Y6L7 1015 aa13.74□□□□□ -0.21
SDF2-209ENST00000591903 NPC1L1Q9UHC9 1359 aa13.73□□□□□ -0.21
SDF2-209ENST00000591903 ALDH1B1P30837 517 aa13.73□□□□□ -0.21
SDF2-209ENST00000591903 EIF6P56537 245 aaKnown RBP13.73□□□□□ -0.21
SDF2-209ENST00000591903 TEFQ10587 303 aa13.73□□□□□ -0.21
SDF2-209ENST00000591903 MTHFSDQ2M296 383 aaKnown RBP13.73□□□□□ -0.21
SDF2-209ENST00000591903 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
SDF2-209ENST00000591903 PSMD1Q99460 953 aa13.73□□□□□ -0.21
SDF2-209ENST00000591903 MCOLN1Q9GZU1 580 aa13.73□□□□□ -0.21
SDF2-209ENST00000591903 RGL2O15211 777 aa13.72□□□□□ -0.21
SDF2-209ENST00000591903 GRM1Q13255 1194 aa13.72□□□□□ -0.21
SDF2-209ENST00000591903 TPTE2Q6XPS3 522 aa13.72□□□□□ -0.21
SDF2-209ENST00000591903 USP50Q70EL3 339 aaPredicted RBP13.72□□□□□ -0.21
SDF2-209ENST00000591903 SYNE4Q8N205 404 aa13.72□□□□□ -0.21
SDF2-209ENST00000591903 FMNL2Q96PY5 1086 aa13.72□□□□□ -0.21
SDF2-209ENST00000591903 HMOX1P09601 288 aa13.71□□□□□ -0.21
SDF2-209ENST00000591903 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.21
SDF2-209ENST00000591903 GRIPAP1Q4V328 841 aa13.71□□□□□ -0.21
SDF2-209ENST00000591903 CC2D2BQ6DHV5 1058 aa13.71□□□□□ -0.21
SDF2-209ENST00000591903 HHIPL1Q96JK4 782 aa13.71□□□□□ -0.21
SDF2-209ENST00000591903 A1BGP04217 495 aa13.7□□□□□ -0.22
SDF2-209ENST00000591903 CST9Q5W186 159 aa13.7□□□□□ -0.22
SDF2-209ENST00000591903 PER1O15534 1290 aaPredicted RBP13.69□□□□□ -0.22
SDF2-209ENST00000591903 DGKZQ13574 1117 aa13.69□□□□□ -0.22
SDF2-209ENST00000591903 TSKSQ9UJT2 592 aa13.69□□□□□ -0.22
SDF2-209ENST00000591903 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
SDF2-209ENST00000591903 SNED1Q8TER0 1413 aa13.69□□□□□ -0.22
SDF2-209ENST00000591903 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
SDF2-209ENST00000591903 AOC2O75106 756 aa13.68□□□□□ -0.22
SDF2-209ENST00000591903 SCNN1DP51172 638 aa13.68□□□□□ -0.22
SDF2-209ENST00000591903 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
SDF2-209ENST00000591903 SAPCD2Q86UD0 394 aa13.68□□□□□ -0.22
SDF2-209ENST00000591903 KNSTRNQ9Y448 316 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms