RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	FAM9B	Q8IZU0	186 aa		22.58	■■□□□ 1.21
MBD1-221	ENST00000589867	DCAF8L1	A6NGE4	600 aa		22.57	■■□□□ 1.2
MBD1-221	ENST00000589867	RGL2	O15211	777 aa		22.57	■■□□□ 1.2
MBD1-221	ENST00000589867	GNAI1	P63096	354 aa		22.57	■■□□□ 1.2
MBD1-221	ENST00000589867	NECTIN2	Q92692	538 aa		22.57	■■□□□ 1.2
MBD1-221	ENST00000589867	CHRNA5	P30532	468 aa		22.56	■■□□□ 1.2
MBD1-221	ENST00000589867	DUSP27	Q5VZP5	1158 aa		22.56	■■□□□ 1.2
MBD1-221	ENST00000589867	PRR5L	Q6MZQ0	368 aa		22.56	■■□□□ 1.2
MBD1-221	ENST00000589867	MAP3K15	Q6ZN16	1313 aa		22.56	■■□□□ 1.2
MBD1-221	ENST00000589867	HOXB7	P09629	217 aa		22.55	■■□□□ 1.2
MBD1-221	ENST00000589867	NPM2	Q86SE8	214 aa	Known RBP	22.55	■■□□□ 1.2
MBD1-221	ENST00000589867	CCDC24	Q8N4L8	307 aa		22.55	■■□□□ 1.2
MBD1-221	ENST00000589867	ERVV-1	B6SEH8	477 aa		22.54	■■□□□ 1.2
MBD1-221	ENST00000589867	CALD1	Q05682	793 aa	Known RBP	22.54	■■□□□ 1.2
MBD1-221	ENST00000589867	C8orf58	Q8NAV2	365 aa		22.54	■■□□□ 1.2
MBD1-221	ENST00000589867	SETDB2	Q96T68	719 aa		22.54	■■□□□ 1.2
MBD1-221	ENST00000589867	DLEC1	Q9Y238	1755 aa		22.53	■■□□□ 1.2
MBD1-221	ENST00000589867	TSR2	Q969E8	191 aa	Known RBP	22.53	■■□□□ 1.2
MBD1-221	ENST00000589867	COL11A2	P13942	1736 aa	Predicted RBP	22.52	■■□□□ 1.2
MBD1-221	ENST00000589867	TSPYL6	Q8N831	410 aa		22.52	■■□□□ 1.2
MBD1-221	ENST00000589867	ZBTB3	Q9H5J0	574 aa		22.52	■■□□□ 1.2
MBD1-221	ENST00000589867	DDX21	Q9NR30	783 aa	Known RBP eCLIP	22.52	■■□□□ 1.2
MBD1-221	ENST00000589867	CHPF2	Q9P2E5	772 aa		22.52	■■□□□ 1.2
MBD1-221	ENST00000589867	SALL2	Q9Y467	1007 aa	Predicted RBP	22.52	■■□□□ 1.2
MBD1-221	ENST00000589867	IL16	Q14005	1332 aa		22.52	■■□□□ 1.2
MBD1-221	ENST00000589867	HDGFL1	Q5TGJ6	251 aa		22.51	■■□□□ 1.19
MBD1-221	ENST00000589867	NIP7	Q9Y221	180 aa	Known RBP eCLIP	22.51	■■□□□ 1.19
MBD1-221	ENST00000589867	ZNF652	Q9Y2D9	606 aa		22.51	■■□□□ 1.19
MBD1-221	ENST00000589867	ARFGEF1	Q9Y6D6	1849 aa		22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	ATP10D	Q9P241	1426 aa		22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	ELL2	O00472	640 aa	Predicted RBP	22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	GRIN3B	O60391	1043 aa		22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	YY1	P25490	414 aa		22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	COPS6	Q7L5N1	327 aa		22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	XAGE3	Q8WTP9	111 aa		22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	SPINK5	Q9NQ38	1064 aa	Predicted RBP	22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	UBN2	Q6ZU65	1347 aa		22.5	■■□□□ 1.19
MBD1-221	ENST00000589867	GIGYF2	Q6Y7W6	1299 aa	Known RBP	22.48	■■□□□ 1.19
MBD1-221	ENST00000589867	KIF6	Q6ZMV9	814 aa		22.48	■■□□□ 1.19
MBD1-221	ENST00000589867	ZNF34	Q8IZ26	560 aa		22.48	■■□□□ 1.19
MBD1-221	ENST00000589867	BRIP1	Q9BX63	1249 aa		22.48	■■□□□ 1.19
MBD1-221	ENST00000589867	CCER2	I3L3R5	266 aa		22.47	■■□□□ 1.19
MBD1-221	ENST00000589867	WDR63	Q8IWG1	891 aa		22.47	■■□□□ 1.19
MBD1-221	ENST00000589867	CNBD1	Q8NA66	436 aa		22.47	■■□□□ 1.19
MBD1-221	ENST00000589867	PIM2	Q9P1W9	311 aa		22.47	■■□□□ 1.19
MBD1-221	ENST00000589867	BCS1L	Q9Y276	419 aa		22.47	■■□□□ 1.19
MBD1-221	ENST00000589867	ZNF521	Q96K83	1311 aa		22.47	■■□□□ 1.19
MBD1-221	ENST00000589867	C2CD5	Q86YS7	1000 aa		22.46	■■□□□ 1.19
MBD1-221	ENST00000589867	GPT	P24298	496 aa		22.45	■■□□□ 1.18
MBD1-221	ENST00000589867	AIMP1	Q12904	312 aa	Known RBP	22.45	■■□□□ 1.18
MBD1-221	ENST00000589867	NBPF5P	Q86XG9	351 aa	Predicted RBP	22.45	■■□□□ 1.18
MBD1-221	ENST00000589867	DBF4	Q9UBU7	674 aa	Predicted RBP	22.45	■■□□□ 1.18
MBD1-221	ENST00000589867	FANCI	Q9NVI1	1328 aa		22.45	■■□□□ 1.18
MBD1-221	ENST00000589867	ANKRD36C	Q5JPF3	1778 aa		22.45	■■□□□ 1.18
MBD1-221	ENST00000589867	FAM177B	A6PVY3	158 aa		22.44	■■□□□ 1.18
MBD1-221	ENST00000589867	SUSD4	Q5VX71	490 aa		22.44	■■□□□ 1.18
MBD1-221	ENST00000589867	ABCC12	Q96J65	1359 aa		22.44	■■□□□ 1.18
MBD1-221	ENST00000589867	TNRC6C	Q9HCJ0	1690 aa	Known RBP	22.44	■■□□□ 1.18
MBD1-221	ENST00000589867	KLRG2	A4D1S0	409 aa	Predicted RBP	22.43	■■□□□ 1.18
MBD1-221	ENST00000589867	DALRD3	Q5D0E6	543 aa	Known RBP	22.43	■■□□□ 1.18
MBD1-221	ENST00000589867	PHAX	Q9H814	394 aa	Known RBP	22.42	■■□□□ 1.18
MBD1-221	ENST00000589867	IBTK	Q9P2D0	1353 aa	Predicted RBP	22.41	■■□□□ 1.18
MBD1-221	ENST00000589867		H0YIN7	160 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	NTSR2	O95665	410 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	SRGN	P10124	158 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	PDE6B	P35913	854 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	ST5	P78524	1137 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	TPTE2	Q6XPS3	522 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	NUTM1	Q86Y26	1132 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	HYPK	Q9NX55	129 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	SLX4	Q8IY92	1834 aa		22.41	■■□□□ 1.18
MBD1-221	ENST00000589867	DIEXF	Q68CQ4	756 aa	Known RBP	22.4	■■□□□ 1.18
MBD1-221	ENST00000589867	MIER1	Q8N108	512 aa		22.4	■■□□□ 1.18
MBD1-221	ENST00000589867	ARFGEF2	Q9Y6D5	1785 aa		22.4	■■□□□ 1.18
MBD1-221	ENST00000589867	ADCY9	O60503	1353 aa		22.39	■■□□□ 1.18
MBD1-221	ENST00000589867	TCIRG1	Q13488	830 aa		22.39	■■□□□ 1.17
MBD1-221	ENST00000589867	ERFE	Q4G0M1	354 aa		22.39	■■□□□ 1.17
MBD1-221	ENST00000589867	PLBD2	Q8NHP8	589 aa		22.39	■■□□□ 1.17
MBD1-221	ENST00000589867	TWISTNB	Q3B726	338 aa	Predicted RBP	22.38	■■□□□ 1.17
MBD1-221	ENST00000589867	ANKRD13D	Q6ZTN6	518 aa		22.38	■■□□□ 1.17
MBD1-221	ENST00000589867	NLRP10	Q86W26	655 aa		22.38	■■□□□ 1.17
MBD1-221	ENST00000589867	TTLL6	Q8N841	843 aa		22.38	■■□□□ 1.17
MBD1-221	ENST00000589867	PDZRN3	Q9UPQ7	1066 aa		22.38	■■□□□ 1.17
MBD1-221	ENST00000589867	CACNA1S	Q13698	1873 aa		22.38	■■□□□ 1.17
MBD1-221	ENST00000589867	TCERG1	O14776	1098 aa	Known RBP	22.37	■■□□□ 1.17
MBD1-221	ENST00000589867	CCDC30	Q5VVM6	783 aa		22.37	■■□□□ 1.17
MBD1-221	ENST00000589867	ZNF784	Q8NCA9	323 aa	Predicted RBP	22.37	■■□□□ 1.17
MBD1-221	ENST00000589867	ISCA1	Q9BUE6	129 aa		22.37	■■□□□ 1.17
MBD1-221	ENST00000589867	SBF1	O95248	1867 aa		22.37	■■□□□ 1.17
MBD1-221	ENST00000589867	VAMP4	O75379	141 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	EXOSC9	Q06265	439 aa	Known RBP	22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	PARP10	Q53GL7	1025 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	STYK1	Q6J9G0	422 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	ARHGAP27	Q6ZUM4	889 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	C3orf67	Q6ZVT6	689 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	SYNE4	Q8N205	404 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	ZNF622	Q969S3	477 aa	Known RBP eCLIP	22.36	■■□□□ 1.17	2e-8	■■□□□ 13.9
MBD1-221	ENST00000589867	NYX	Q9GZU5	481 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	RIC1	Q4ADV7	1423 aa		22.36	■■□□□ 1.17
MBD1-221	ENST00000589867	NPHP1	O15259	732 aa		22.35	■■□□□ 1.17

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