RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 FSD2A1L4K1 749 aa23.28■■□□□ 1.32
PRKCSH-209ENST00000589838 IFIT2P09913 472 aaKnown RBP23.28■■□□□ 1.32
PRKCSH-209ENST00000589838 G3BP1Q13283 466 aaKnown RBP eCLIP23.28■■□□□ 1.321e-6■■□□□ 13.6
PRKCSH-209ENST00000589838 ZNF496Q96IT1 587 aaPredicted RBP23.28■■□□□ 1.32
PRKCSH-209ENST00000589838 CYP27B1O15528 508 aa23.27■■□□□ 1.32
PRKCSH-209ENST00000589838 RUFY2Q8WXA3 655 aa23.27■■□□□ 1.32
PRKCSH-209ENST00000589838 SUCLG2Q96I99 432 aa23.27■■□□□ 1.32
PRKCSH-209ENST00000589838 METTL22Q9BUU2 404 aaPredicted RBP23.27■■□□□ 1.32
PRKCSH-209ENST00000589838 ECHDC1Q9NTX5 307 aa23.27■■□□□ 1.32
PRKCSH-209ENST00000589838 XIRP1Q702N8 1843 aaKnown RBP23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 SGSM2O43147 1006 aa23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 BAG4O95429 457 aaKnown RBP23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 CYP2E1P05181 493 aaPredicted RBP23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 CABP4P57796 275 aa23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 XAGE3Q8WTP9 111 aa23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 MYL6BP14649 208 aa23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 HSPA4P34932 840 aa23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 PARP4Q9UKK3 1724 aaKnown RBP23.26■■□□□ 1.31
PRKCSH-209ENST00000589838 NEURL1BA8MQ27 555 aa23.25■■□□□ 1.31
PRKCSH-209ENST00000589838 KIAA1211Q6ZU35 1233 aa23.25■■□□□ 1.31
PRKCSH-209ENST00000589838 COPS6Q7L5N1 327 aa23.25■■□□□ 1.31
PRKCSH-209ENST00000589838 BICC1Q9H694 974 aaKnown RBP23.25■■□□□ 1.31
PRKCSH-209ENST00000589838 MAP4K4O95819 1239 aaPredicted RBP23.24■■□□□ 1.31
PRKCSH-209ENST00000589838 IGKV5-2P06315 115 aa23.24■■□□□ 1.31
PRKCSH-209ENST00000589838 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
PRKCSH-209ENST00000589838 GCKRQ14397 625 aa23.24■■□□□ 1.31
PRKCSH-209ENST00000589838 BRINP3Q76B58 766 aa23.24■■□□□ 1.31
PRKCSH-209ENST00000589838 TMX3Q96JJ7 454 aa23.24■■□□□ 1.31
PRKCSH-209ENST00000589838 PALD1Q9ULE6 856 aa23.24■■□□□ 1.31
PRKCSH-209ENST00000589838 RAD50Q92878 1312 aa23.23■■□□□ 1.31
PRKCSH-209ENST00000589838 INTS4Q96HW7 963 aaKnown RBP23.23■■□□□ 1.31
PRKCSH-209ENST00000589838 KAZALD1Q96I82 304 aa23.23■■□□□ 1.31
PRKCSH-209ENST00000589838 HSPA2P54652 639 aa23.22■■□□□ 1.31
PRKCSH-209ENST00000589838 CUL4AQ13619 759 aa23.22■■□□□ 1.31
PRKCSH-209ENST00000589838 MYD88Q99836 296 aa23.22■■□□□ 1.31
PRKCSH-209ENST00000589838 DIAPH3Q9NSV4 1193 aa23.22■■□□□ 1.31
PRKCSH-209ENST00000589838 PA2G4Q9UQ80 394 aaKnown RBP23.22■■□□□ 1.31
PRKCSH-209ENST00000589838 MRE11P49959 708 aa23.22■■□□□ 1.31
PRKCSH-209ENST00000589838 LAMB4A4D0S4 1761 aa23.21■■□□□ 1.31
PRKCSH-209ENST00000589838 ERBB4Q15303 1308 aa23.21■■□□□ 1.31
PRKCSH-209ENST00000589838 WDR17Q8IZU2 1322 aa23.21■■□□□ 1.31
PRKCSH-209ENST00000589838 AACSQ86V21 672 aa23.21■■□□□ 1.31
PRKCSH-209ENST00000589838 ZGPATQ8N5A5 531 aaKnown RBP23.21■■□□□ 1.31
PRKCSH-209ENST00000589838 EVI5LQ96CN4 794 aa23.21■■□□□ 1.31
PRKCSH-209ENST00000589838 USP16Q9Y5T5 823 aa23.21■■□□□ 1.31
PRKCSH-209ENST00000589838 HIP1O00291 1037 aa23.2■■□□□ 1.3
PRKCSH-209ENST00000589838 PRDM11Q9NQV5 511 aa23.2■■□□□ 1.3
PRKCSH-209ENST00000589838 PCDH11XQ9BZA7 1347 aa23.2■■□□□ 1.3
PRKCSH-209ENST00000589838 PCDH11YQ9BZA8 1340 aa23.2■■□□□ 1.3
PRKCSH-209ENST00000589838 LSG1Q9H089 658 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-209ENST00000589838 LRP10Q7Z4F1 713 aa23.19■■□□□ 1.3
PRKCSH-209ENST00000589838 ZCRB1Q8TBF4 217 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-209ENST00000589838 COL15A1P39059 1388 aa23.19■■□□□ 1.3
PRKCSH-209ENST00000589838 SOS2Q07890 1332 aaPredicted RBP23.18■■□□□ 1.3
PRKCSH-209ENST00000589838 KLHL40Q2TBA0 621 aa23.18■■□□□ 1.3
PRKCSH-209ENST00000589838 AFDNP55196 1824 aaKnown RBP23.18■■□□□ 1.3
PRKCSH-209ENST00000589838 SASH1O94885 1247 aa23.17■■□□□ 1.3
PRKCSH-209ENST00000589838 CWC27Q6UX04 472 aaKnown RBP23.17■■□□□ 1.3
PRKCSH-209ENST00000589838 TOM1L2Q6ZVM7 507 aa23.17■■□□□ 1.3
PRKCSH-209ENST00000589838 IL25Q9H293 177 aa23.17■■□□□ 1.3
PRKCSH-209ENST00000589838 ERVV-2B6SEH9 535 aa23.17■■□□□ 1.3
PRKCSH-209ENST00000589838 XRCC6P12956 609 aaKnown RBP eCLIP23.17■■□□□ 1.3
PRKCSH-209ENST00000589838 MCTP1Q6DN14 999 aa23.16■■□□□ 1.3
PRKCSH-209ENST00000589838 PLBD2Q8NHP8 589 aa23.16■■□□□ 1.3
PRKCSH-209ENST00000589838 SLAIN2Q9P270 581 aa23.16■■□□□ 1.3
PRKCSH-209ENST00000589838 DDX49Q9Y6V7 483 aaKnown RBP23.16■■□□□ 1.3
PRKCSH-209ENST00000589838 ARFGEF2Q9Y6D5 1785 aa23.16■■□□□ 1.3
PRKCSH-209ENST00000589838 COPRSQ9NQ92 184 aa23.15■■□□□ 1.3
PRKCSH-209ENST00000589838 SNX14Q9Y5W7 946 aa23.15■■□□□ 1.3
PRKCSH-209ENST00000589838 EAF2Q96CJ1 260 aaPredicted RBP23.14■■□□□ 1.29
PRKCSH-209ENST00000589838 NKX1-1Q15270 411 aaPredicted RBP23.13■■□□□ 1.29
PRKCSH-209ENST00000589838 CARD10Q9BWT7 1032 aa23.13■■□□□ 1.29
PRKCSH-209ENST00000589838 UPF3BQ9BZI7 483 aaKnown RBP23.13■■□□□ 1.29
PRKCSH-209ENST00000589838 PKP1Q13835 747 aa23.13■■□□□ 1.29
PRKCSH-209ENST00000589838 GRPEL1Q9HAV7 217 aa23.13■■□□□ 1.29
PRKCSH-209ENST00000589838 ZDHHC9Q9Y397 364 aa23.13■■□□□ 1.29
PRKCSH-209ENST00000589838 COL5A2P05997 1499 aaPredicted RBP23.12■■□□□ 1.29
PRKCSH-209ENST00000589838 STRCQ7RTU9 1775 aa23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 IL2RBP14784 551 aa23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 RABL6Q3YEC7 729 aaPredicted RBP23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 CCDC8Q9H0W5 538 aaPredicted RBP23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 SIL1Q9H173 461 aa23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 LMBRD1Q9NUN5 540 aa23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 GLI3P10071 1580 aa23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 UBR2Q8IWV8 1755 aa23.11■■□□□ 1.29
PRKCSH-209ENST00000589838 EPHA10Q5JZY3 1008 aa23.1■■□□□ 1.29
PRKCSH-209ENST00000589838 A0A087WZG4 1122 aa23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 BRD1O95696 1058 aa23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 KCNB2Q92953 911 aa23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 ARXQ96QS3 562 aa23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 NOL8Q76FK4 1167 aaKnown RBP23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 UBE3BQ7Z3V4 1068 aa23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 TTC14Q96N46 770 aa23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 TM6SF1Q9BZW5 370 aa23.09■■□□□ 1.29
PRKCSH-209ENST00000589838 ABCA3Q99758 1704 aa23.08■■□□□ 1.29
PRKCSH-209ENST00000589838 SNRKQ9NRH2 765 aa23.08■■□□□ 1.29
PRKCSH-209ENST00000589838 RFX5P48382 616 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 PIP4K2AP48426 406 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 LIMCH1Q9UPQ0 1083 aa23.07■■□□□ 1.28
PRKCSH-209ENST00000589838 ZKSCAN1P17029 563 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms