RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
APOC1-204ENST00000589078 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
APOC1-204ENST00000589078 IFT57Q9NWB7 429 aa12.58□□□□□ -0.4
APOC1-204ENST00000589078 ZBTB1Q9Y2K1 713 aa12.58□□□□□ -0.4
APOC1-204ENST00000589078 NRXN2Q9P2S2 1712 aa12.57□□□□□ -0.4
APOC1-204ENST00000589078 CHL1O00533 1208 aa12.57□□□□□ -0.4
APOC1-204ENST00000589078 IL6STP40189 918 aaPredicted RBP12.57□□□□□ -0.4
APOC1-204ENST00000589078 GNAI1P63096 354 aa12.57□□□□□ -0.4
APOC1-204ENST00000589078 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
APOC1-204ENST00000589078 COL15A1P39059 1388 aa12.56□□□□□ -0.4
APOC1-204ENST00000589078 SIPA1L3O60292 1781 aaPredicted RBP12.56□□□□□ -0.4
APOC1-204ENST00000589078 GLTPD2A6NH11 291 aa12.56□□□□□ -0.4
APOC1-204ENST00000589078 POLRMTO00411 1230 aaKnown RBP12.56□□□□□ -0.4
APOC1-204ENST00000589078 VEGFAP15692 232 aaPredicted RBP12.56□□□□□ -0.4
APOC1-204ENST00000589078 LMNB1P20700 586 aa12.56□□□□□ -0.4
APOC1-204ENST00000589078 USP16Q9Y5T5 823 aa12.56□□□□□ -0.4
APOC1-204ENST00000589078 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
APOC1-204ENST00000589078 A1BGP04217 495 aa12.55□□□□□ -0.4
APOC1-204ENST00000589078 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
APOC1-204ENST00000589078 WWC1Q8IX03 1113 aa12.55□□□□□ -0.4
APOC1-204ENST00000589078 CHMP4AQ9BY43 222 aa12.55□□□□□ -0.4
APOC1-204ENST00000589078 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
APOC1-204ENST00000589078 TM4SF1P30408 202 aa12.54□□□□□ -0.4
APOC1-204ENST00000589078 NARFQ9UHQ1 456 aa12.54□□□□□ -0.4
APOC1-204ENST00000589078 IL16Q14005 1332 aa12.54□□□□□ -0.4
APOC1-204ENST00000589078 ERBB4Q15303 1308 aa12.54□□□□□ -0.4
APOC1-204ENST00000589078 DICER1Q9UPY3 1922 aaKnown RBP12.53□□□□□ -0.4
APOC1-204ENST00000589078 HOXB7P09629 217 aa12.53□□□□□ -0.4
APOC1-204ENST00000589078 ZNF853P0CG23 659 aa12.53□□□□□ -0.4
APOC1-204ENST00000589078 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
APOC1-204ENST00000589078 WDR63Q8IWG1 891 aa12.53□□□□□ -0.4
APOC1-204ENST00000589078 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
APOC1-204ENST00000589078 VIRMAQ69YN4 1812 aaKnown RBP12.53□□□□□ -0.4
APOC1-204ENST00000589078 DLG5Q8TDM6 1919 aa12.52□□□□□ -0.4
APOC1-204ENST00000589078 COL11A2P13942 1736 aaPredicted RBP12.52□□□□□ -0.41
APOC1-204ENST00000589078 EIF2S2P20042 333 aaKnown RBP12.52□□□□□ -0.41
APOC1-204ENST00000589078 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.41
APOC1-204ENST00000589078 SALL2Q9Y467 1007 aaPredicted RBP12.52□□□□□ -0.41
APOC1-204ENST00000589078 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
APOC1-204ENST00000589078 NFKBIEO00221 500 aa12.51□□□□□ -0.41
APOC1-204ENST00000589078 DZIP3Q86Y13 1208 aaKnown RBP12.51□□□□□ -0.41
APOC1-204ENST00000589078 MIER1Q8N108 512 aa12.51□□□□□ -0.41
APOC1-204ENST00000589078 MKRN1Q9UHC7 482 aaKnown RBP12.51□□□□□ -0.41
APOC1-204ENST00000589078 CARMIL3Q8ND23 1372 aa12.51□□□□□ -0.41
APOC1-204ENST00000589078 FER1L6Q2WGJ9 1857 aa12.51□□□□□ -0.41
APOC1-204ENST00000589078 POTECB2RU33 542 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 NBPF26B4DH59 902 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 RGL2O15211 777 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 PIP4K2AP48426 406 aaPredicted RBP12.5□□□□□ -0.41
APOC1-204ENST00000589078 NFIXQ14938 502 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 NBPF10Q6P3W6 841 aaKnown RBP12.5□□□□□ -0.41
APOC1-204ENST00000589078 KIF6Q6ZMV9 814 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 NBPF15Q8N660 670 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 TBC1D2BQ9UPU7 963 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 CACNA1SQ13698 1873 aa12.5□□□□□ -0.41
APOC1-204ENST00000589078 FOXN1O15353 648 aa12.49□□□□□ -0.41
APOC1-204ENST00000589078 MYL6BP14649 208 aa12.49□□□□□ -0.41
APOC1-204ENST00000589078 CLEC4GQ6UXB4 293 aa12.49□□□□□ -0.41
APOC1-204ENST00000589078 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
APOC1-204ENST00000589078 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
APOC1-204ENST00000589078 CAMTA2O94983 1202 aa12.48□□□□□ -0.41
APOC1-204ENST00000589078 SLC34A2O95436 690 aa12.48□□□□□ -0.41
APOC1-204ENST00000589078 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
APOC1-204ENST00000589078 C2CD5Q86YS7 1000 aa12.48□□□□□ -0.41
APOC1-204ENST00000589078 SCN7AQ01118 1682 aa12.48□□□□□ -0.41
APOC1-204ENST00000589078 NPHP1O15259 732 aa12.47□□□□□ -0.41
APOC1-204ENST00000589078 SERPINB2P05120 415 aa12.47□□□□□ -0.41
APOC1-204ENST00000589078 KRT24Q2M2I5 525 aa12.47□□□□□ -0.41
APOC1-204ENST00000589078 CHADLQ6NUI6 762 aa12.47□□□□□ -0.41
APOC1-204ENST00000589078 NECTIN2Q92692 538 aa12.47□□□□□ -0.41
APOC1-204ENST00000589078 TSR2Q969E8 191 aaKnown RBP12.47□□□□□ -0.41
APOC1-204ENST00000589078 SETDB2Q96T68 719 aa12.47□□□□□ -0.41
APOC1-204ENST00000589078 DDX21Q9NR30 783 aaKnown RBP eCLIP12.47□□□□□ -0.41
APOC1-204ENST00000589078 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
APOC1-204ENST00000589078 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 ERVV-1B6SEH8 477 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 H0YIN7 160 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 POTEIP0CG38 1075 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 POTEJP0CG39 1038 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 CCDC30Q5VVM6 783 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 DPY19L2Q6NUT2 758 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 BICDL1Q6ZP65 573 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 BCL2L12Q9HB09 334 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 HYPKQ9NX55 129 aa12.46□□□□□ -0.41
APOC1-204ENST00000589078 ARFGEF2Q9Y6D5 1785 aa12.46□□□□□ -0.42
APOC1-204ENST00000589078 MAP3K15Q6ZN16 1313 aa12.45□□□□□ -0.42
APOC1-204ENST00000589078 FANCIQ9NVI1 1328 aa12.45□□□□□ -0.42
APOC1-204ENST00000589078 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
APOC1-204ENST00000589078 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
APOC1-204ENST00000589078 TBC1D9BQ66K14 1250 aa12.45□□□□□ -0.42
APOC1-204ENST00000589078 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
APOC1-204ENST00000589078 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
APOC1-204ENST00000589078 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
APOC1-204ENST00000589078 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
APOC1-204ENST00000589078 LAMB4A4D0S4 1761 aa12.44□□□□□ -0.42
APOC1-204ENST00000589078 E9PSI1 815 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 709.9 ms