RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 BTG4Q9NY30 223 aa10.96□□□□□ -0.65
SMAD4-206ENST00000588860 DBF4Q9UBU7 674 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-206ENST00000588860 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
SMAD4-206ENST00000588860 GNAI3P08754 354 aa10.95□□□□□ -0.66
SMAD4-206ENST00000588860 ANKRD45Q5TZF3 282 aa10.95□□□□□ -0.66
SMAD4-206ENST00000588860 TTC5Q8N0Z6 440 aa10.95□□□□□ -0.66
SMAD4-206ENST00000588860 ADCY9O60503 1353 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 AK9Q5TCS8 1911 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 TUBGCP6Q96RT7 1819 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 GNAI2P04899 355 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 PROSER3Q2NL68 480 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 MAMSTRQ6ZN01 415 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 MS4A3Q96HJ5 214 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 NUP188Q5SRE5 1749 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 DOT1LQ8TEK3 1739 aa10.94□□□□□ -0.66
SMAD4-206ENST00000588860 HMMRO75330 724 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 DDX54Q8TDD1 881 aaKnown RBP10.93□□□□□ -0.66
SMAD4-206ENST00000588860 DNAAF4Q8WXU2 420 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 ZNF496Q96IT1 587 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-206ENST00000588860 GJD4Q96KN9 370 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-206ENST00000588860 FMNL2Q96PY5 1086 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 SRCIN1Q9C0H9 1055 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 DCTPP1Q9H773 170 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 HYPKQ9NX55 129 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 USP35Q9P2H5 1018 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 ZBTB47Q9UFB7 747 aaPredicted RBP10.93□□□□□ -0.66
SMAD4-206ENST00000588860 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 BCL9LQ86UU0 1499 aa10.93□□□□□ -0.66
SMAD4-206ENST00000588860 PI4KAP2A4QPH2 592 aa10.92□□□□□ -0.66
SMAD4-206ENST00000588860 ERVV-2B6SEH9 535 aa10.92□□□□□ -0.66
SMAD4-206ENST00000588860 UBTFL1P0CB47 393 aaPredicted RBP10.92□□□□□ -0.66
SMAD4-206ENST00000588860 PI4KAP1Q8N8J0 262 aa10.92□□□□□ -0.66
SMAD4-206ENST00000588860 IPO9Q96P70 1041 aaKnown RBP10.92□□□□□ -0.66
SMAD4-206ENST00000588860 DDX21Q9NR30 783 aaKnown RBP eCLIP10.92□□□□□ -0.66
SMAD4-206ENST00000588860 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.92□□□□□ -0.66
SMAD4-206ENST00000588860 DISP2A7MBM2 1401 aa10.92□□□□□ -0.66
SMAD4-206ENST00000588860 DDX58O95786 925 aaKnown RBP10.91□□□□□ -0.66
SMAD4-206ENST00000588860 SNRPA1P09661 255 aaKnown RBP10.91□□□□□ -0.66
SMAD4-206ENST00000588860 NKX1-1Q15270 411 aaPredicted RBP10.91□□□□□ -0.66
SMAD4-206ENST00000588860 KSR2Q6VAB6 950 aa10.91□□□□□ -0.66
SMAD4-206ENST00000588860 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
SMAD4-206ENST00000588860 MAP3K2Q9Y2U5 619 aa10.91□□□□□ -0.66
SMAD4-206ENST00000588860 LRRFIP2Q9Y608 721 aaKnown RBP10.91□□□□□ -0.66
SMAD4-206ENST00000588860 APBB1O00213 710 aa10.9□□□□□ -0.66
SMAD4-206ENST00000588860 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
SMAD4-206ENST00000588860 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
SMAD4-206ENST00000588860 USP44Q9H0E7 712 aa10.9□□□□□ -0.66
SMAD4-206ENST00000588860 MYL6BP14649 208 aa10.89□□□□□ -0.67
SMAD4-206ENST00000588860 ATP8B2P98198 1209 aa10.89□□□□□ -0.67
SMAD4-206ENST00000588860 AIMP1Q12904 312 aaKnown RBP10.89□□□□□ -0.67
SMAD4-206ENST00000588860 R3HDM1Q15032 1099 aaKnown RBP10.89□□□□□ -0.67
SMAD4-206ENST00000588860 PDIA6Q15084 440 aa10.89□□□□□ -0.67
SMAD4-206ENST00000588860 DDRGK1Q96HY6 314 aa10.89□□□□□ -0.67
SMAD4-206ENST00000588860 BCL11AQ9H165 835 aa10.89□□□□□ -0.67
SMAD4-206ENST00000588860 TNS2Q63HR2 1409 aa10.89□□□□□ -0.67
SMAD4-206ENST00000588860 SMARCA5O60264 1052 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-206ENST00000588860 ALDH1L1O75891 902 aa10.88□□□□□ -0.67
SMAD4-206ENST00000588860 SEC24BO95487 1268 aa10.88□□□□□ -0.67
SMAD4-206ENST00000588860 BAG6P46379 1132 aa10.88□□□□□ -0.67
SMAD4-206ENST00000588860 XAGE3Q8WTP9 111 aa10.88□□□□□ -0.67
SMAD4-206ENST00000588860 NOP58Q9Y2X3 529 aaKnown RBP10.88□□□□□ -0.67
SMAD4-206ENST00000588860 USP16Q9Y5T5 823 aa10.88□□□□□ -0.67
SMAD4-206ENST00000588860 TJP1Q07157 1748 aa10.87□□□□□ -0.67
SMAD4-206ENST00000588860 PNMA6EA0A0J9YXQ4 647 aa10.87□□□□□ -0.67
SMAD4-206ENST00000588860 RIC3Q7Z5B4 369 aa10.87□□□□□ -0.67
SMAD4-206ENST00000588860 UPF2Q9HAU5 1272 aaKnown RBP10.87□□□□□ -0.67
SMAD4-206ENST00000588860 TMOD3Q9NYL9 352 aa10.87□□□□□ -0.67
SMAD4-206ENST00000588860 PIP4K2AP48426 406 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-206ENST00000588860 BMP2KLQ5H9B9 411 aa10.86□□□□□ -0.67
SMAD4-206ENST00000588860 PLEKHM2Q8IWE5 1019 aa10.86□□□□□ -0.67
SMAD4-206ENST00000588860 LINS1Q8NG48 757 aa10.86□□□□□ -0.67
SMAD4-206ENST00000588860 C9orf78Q9NZ63 289 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-206ENST00000588860 EXOC6BQ9Y2D4 811 aa10.86□□□□□ -0.67
SMAD4-206ENST00000588860 ERBB4Q15303 1308 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 ANKRD36CQ5JPF3 1778 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 NBPF7P0C2Y1 421 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-206ENST00000588860 C1QTNF8P60827 252 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 NEXNQ0ZGT2 675 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 CWF19L2Q2TBE0 894 aaKnown RBP10.85□□□□□ -0.67
SMAD4-206ENST00000588860 COPS6Q7L5N1 327 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 PPP1R42Q7Z4L9 355 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 C16orf71Q8IYS4 520 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-206ENST00000588860 ZNF784Q8NCA9 323 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-206ENST00000588860 MYD88Q99836 296 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 BRWD3Q6RI45 1802 aa10.85□□□□□ -0.67
SMAD4-206ENST00000588860 IBTKQ9P2D0 1353 aaPredicted RBP10.85□□□□□ -0.67
SMAD4-206ENST00000588860 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 EXOC5O00471 708 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 PTCD1O75127 700 aaKnown RBP10.84□□□□□ -0.67
SMAD4-206ENST00000588860 MFAP1P55081 439 aaKnown RBP10.84□□□□□ -0.67
SMAD4-206ENST00000588860 TTC22Q5TAA0 569 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 SEPT12Q8IYM1 358 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 OTUD7AQ8TE49 926 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-206ENST00000588860 SSH3Q8TE77 659 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 CDCA7Q9BWT1 371 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-206ENST00000588860 LRRCC1Q9C099 1032 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 TSPYL2Q9H2G4 693 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-206ENST00000588860 HDAC5Q9UQL6 1122 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 SLIT2O94813 1529 aa10.84□□□□□ -0.67
SMAD4-206ENST00000588860 GRM8O00222 908 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms