RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 COPS6Q7L5N1 327 aa19.93■□□□□ 0.78
GHDC-209ENST00000588762 LRP10Q7Z4F1 713 aa19.93■□□□□ 0.78
GHDC-209ENST00000588762 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
GHDC-209ENST00000588762 TCERG1O14776 1098 aaKnown RBP19.92■□□□□ 0.78
GHDC-209ENST00000588762 MAP3K15Q6ZN16 1313 aa19.92■□□□□ 0.78
GHDC-209ENST00000588762 ERVV-1B6SEH8 477 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 RGL2O15211 777 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 SLC4A2P04920 1241 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 CT47B1P0C2W7 299 aaPredicted RBP19.91■□□□□ 0.78
GHDC-209ENST00000588762 PTGER2P43116 358 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 CLEC4GQ6UXB4 293 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 ZNF428Q96B54 188 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
GHDC-209ENST00000588762 ZBTB3Q9H5J0 574 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 BCL2L12Q9HB09 334 aa19.91■□□□□ 0.78
GHDC-209ENST00000588762 MMP10P09238 476 aa19.9■□□□□ 0.78
GHDC-209ENST00000588762 SGIP1Q9BQI5 828 aa19.9■□□□□ 0.78
GHDC-209ENST00000588762 PPP1R1BQ9UD71 204 aaPredicted RBP19.9■□□□□ 0.78
GHDC-209ENST00000588762 PHAXQ9H814 394 aaKnown RBP19.89■□□□□ 0.77
GHDC-209ENST00000588762 PARP3Q9Y6F1 533 aa19.89■□□□□ 0.77
GHDC-209ENST00000588762 ANKRD36CQ5JPF3 1778 aa19.88■□□□□ 0.77
GHDC-209ENST00000588762 ARFGEF2Q9Y6D5 1785 aa19.88■□□□□ 0.77
GHDC-209ENST00000588762 DDX58O95786 925 aaKnown RBP19.88■□□□□ 0.77
GHDC-209ENST00000588762 BICDL1Q6ZP65 573 aa19.88■□□□□ 0.77
GHDC-209ENST00000588762 TM4SF1P30408 202 aa19.87■□□□□ 0.77
GHDC-209ENST00000588762 NFIXQ14938 502 aa19.87■□□□□ 0.77
GHDC-209ENST00000588762 HLFQ16534 295 aa19.87■□□□□ 0.77
GHDC-209ENST00000588762 TBC1D9BQ66K14 1250 aa19.87■□□□□ 0.77
GHDC-209ENST00000588762 ANKRD13DQ6ZTN6 518 aa19.87■□□□□ 0.77
GHDC-209ENST00000588762 PLBD2Q8NHP8 589 aa19.87■□□□□ 0.77
GHDC-209ENST00000588762 SETDB2Q96T68 719 aa19.87■□□□□ 0.77
GHDC-209ENST00000588762 AFDNP55196 1824 aaKnown RBP19.87■□□□□ 0.77
GHDC-209ENST00000588762 GIGYF2Q6Y7W6 1299 aaKnown RBP19.86■□□□□ 0.77
GHDC-209ENST00000588762 ALDH1L2Q3SY69 923 aa19.85■□□□□ 0.77
GHDC-209ENST00000588762 HSP90AB3PQ58FF7 597 aa19.85■□□□□ 0.77
GHDC-209ENST00000588762 RIC3Q7Z5B4 369 aa19.85■□□□□ 0.77
GHDC-209ENST00000588762 NIP7Q9Y221 180 aaKnown RBP eCLIP19.85■□□□□ 0.77
GHDC-209ENST00000588762 CARMIL3Q8ND23 1372 aa19.84■□□□□ 0.77
GHDC-209ENST00000588762 POLRMTO00411 1230 aaKnown RBP19.84■□□□□ 0.77
GHDC-209ENST00000588762 DDR1Q08345 913 aa19.84■□□□□ 0.77
GHDC-209ENST00000588762 FLIIQ13045 1269 aa19.84■□□□□ 0.77
GHDC-209ENST00000588762 G2E3Q7L622 706 aa19.84■□□□□ 0.77
GHDC-209ENST00000588762 ATP10DQ9P241 1426 aa19.84■□□□□ 0.77
GHDC-209ENST00000588762 FKBP5Q13451 457 aaPredicted RBP19.83■□□□□ 0.77
GHDC-209ENST00000588762 SSH1Q8WYL5 1049 aa19.83■□□□□ 0.77
GHDC-209ENST00000588762 SMC4Q9NTJ3 1288 aa19.83■□□□□ 0.77
GHDC-209ENST00000588762 NPHP1O15259 732 aa19.82■□□□□ 0.76
GHDC-209ENST00000588762 SERPINB2P05120 415 aa19.82■□□□□ 0.76
GHDC-209ENST00000588762 NRXN2Q9P2S2 1712 aa19.82■□□□□ 0.76
GHDC-209ENST00000588762 GPTP24298 496 aa19.81■□□□□ 0.76
GHDC-209ENST00000588762 TCIRG1Q13488 830 aa19.81■□□□□ 0.76
GHDC-209ENST00000588762 KSR2Q6VAB6 950 aa19.81■□□□□ 0.76
GHDC-209ENST00000588762 KLHL34Q8N239 644 aa19.81■□□□□ 0.76
GHDC-209ENST00000588762 MRPL50Q8N5N7 158 aaKnown RBP19.81■□□□□ 0.76
GHDC-209ENST00000588762 BCL2L13Q9BXK5 485 aa19.81■□□□□ 0.76
GHDC-209ENST00000588762 PI4KAP2A4QPH2 592 aa19.8■□□□□ 0.76
GHDC-209ENST00000588762 RARSP54136 660 aaKnown RBP19.8■□□□□ 0.76
GHDC-209ENST00000588762 PARP10Q53GL7 1025 aa19.8■□□□□ 0.76
GHDC-209ENST00000588762 NBPF5PQ86XG9 351 aaPredicted RBP19.8■□□□□ 0.76
GHDC-209ENST00000588762 ZNF34Q8IZ26 560 aa19.8■□□□□ 0.76
GHDC-209ENST00000588762 PI4KAP1Q8N8J0 262 aa19.8■□□□□ 0.76
GHDC-209ENST00000588762 MAP3K2Q9Y2U5 619 aa19.8■□□□□ 0.76
GHDC-209ENST00000588762 KIF13BQ9NQT8 1826 aa19.8■□□□□ 0.76
GHDC-209ENST00000588762 SRCAPQ6ZRS2 3230 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 FAM177BA6PVY3 158 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 NEXNQ0ZGT2 675 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 TPTE2Q6XPS3 522 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 PPP1R42Q7Z4L9 355 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 CNBD1Q8NA66 436 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 NYXQ9GZU5 481 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 ADCY9O60503 1353 aa19.78■□□□□ 0.76
GHDC-209ENST00000588762 GTF2E1P29083 439 aaPredicted RBP19.77■□□□□ 0.76
GHDC-209ENST00000588762 MYD88Q99836 296 aa19.77■□□□□ 0.76
GHDC-209ENST00000588762 METTL22Q9BUU2 404 aaPredicted RBP19.77■□□□□ 0.76
GHDC-209ENST00000588762 FHDC1Q9C0D6 1143 aaPredicted RBP19.77■□□□□ 0.76
GHDC-209ENST00000588762 CD2APQ9Y5K6 639 aa19.77■□□□□ 0.76
GHDC-209ENST00000588762 PTPRCP08575 1304 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 UBN2Q6ZU65 1347 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 ATP5J2-PTCD1G3V325 749 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 ST5P78524 1137 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 NLRP10Q86W26 655 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 DNAAF4Q8WXU2 420 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 KIF16BQ96L93 1317 aa19.76■□□□□ 0.75
GHDC-209ENST00000588762 IBTKQ9P2D0 1353 aaPredicted RBP19.75■□□□□ 0.75
GHDC-209ENST00000588762 BRPF1P55201 1214 aaPredicted RBP19.75■□□□□ 0.75
GHDC-209ENST00000588762 TRIM28Q13263 835 aaKnown RBP19.75■□□□□ 0.75
GHDC-209ENST00000588762 SUSD4Q5VX71 490 aa19.75■□□□□ 0.75
GHDC-209ENST00000588762 PRR5LQ6MZQ0 368 aa19.75■□□□□ 0.75
GHDC-209ENST00000588762 ISCA1Q9BUE6 129 aa19.75■□□□□ 0.75
GHDC-209ENST00000588762 ANKRD31Q8N7Z5 1873 aa19.74■□□□□ 0.75
GHDC-209ENST00000588762 UTP14AQ9BVJ6 771 aaKnown RBP19.74■□□□□ 0.75
GHDC-209ENST00000588762 F6X3S4 739 aa19.73■□□□□ 0.75
GHDC-209ENST00000588762 CCDC191Q8NCU4 936 aa19.73■□□□□ 0.75
GHDC-209ENST00000588762 SYT17Q9BSW7 474 aa19.73■□□□□ 0.75
GHDC-209ENST00000588762 TRMT112Q9UI30 125 aaKnown RBP19.73■□□□□ 0.75
GHDC-209ENST00000588762 RNF123Q5XPI4 1314 aa19.73■□□□□ 0.75
GHDC-209ENST00000588762 N4BP2Q86UW6 1770 aaPredicted RBP19.72■□□□□ 0.75
GHDC-209ENST00000588762 NTSR2O95665 410 aa19.72■□□□□ 0.75
GHDC-209ENST00000588762 CCDC24Q8N4L8 307 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms