RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 FOXN1O15353 648 aa20.63■□□□□ 0.89
IFT20-216ENST00000588477 CAMTA2O94983 1202 aa20.63■□□□□ 0.89
IFT20-216ENST00000588477 CC2D1BQ5T0F9 858 aaKnown RBP20.63■□□□□ 0.89
IFT20-216ENST00000588477 MASTLQ96GX5 879 aa20.63■□□□□ 0.89
IFT20-216ENST00000588477 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
IFT20-216ENST00000588477 SOGA3Q5TF21 947 aa20.62■□□□□ 0.89
IFT20-216ENST00000588477 CNTNAP1P78357 1384 aa20.61■□□□□ 0.89
IFT20-216ENST00000588477 IQCA1LA6NCM1 817 aa20.61■□□□□ 0.89
IFT20-216ENST00000588477 U2SURPO15042 1029 aaKnown RBP20.61■□□□□ 0.89
IFT20-216ENST00000588477 DZIP3Q86Y13 1208 aaKnown RBP20.61■□□□□ 0.89
IFT20-216ENST00000588477 GAS2L2Q8NHY3 880 aa20.61■□□□□ 0.89
IFT20-216ENST00000588477 PASKQ96RG2 1323 aa20.6■□□□□ 0.89
IFT20-216ENST00000588477 LDHDQ86WU2 507 aa20.6■□□□□ 0.89
IFT20-216ENST00000588477 COL3A1P02461 1466 aaPredicted RBP20.59■□□□□ 0.89
IFT20-216ENST00000588477 PER1O15534 1290 aaPredicted RBP20.59■□□□□ 0.89
IFT20-216ENST00000588477 KCNQ3O43525 872 aa20.59■□□□□ 0.89
IFT20-216ENST00000588477 PIP4K2AP48426 406 aaPredicted RBP20.59■□□□□ 0.89
IFT20-216ENST00000588477 TAF1DQ9H5J8 278 aaPredicted RBP20.59■□□□□ 0.89
IFT20-216ENST00000588477 KIF7Q2M1P5 1343 aa20.58■□□□□ 0.89
IFT20-216ENST00000588477 L3MBTL3Q96JM7 780 aaPredicted RBP20.58■□□□□ 0.89
IFT20-216ENST00000588477 ADAMTSL1Q8N6G6 1762 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 TMEM88BA6NKF7 163 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 BTBD11A6QL63 1104 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 VEGFBP49765 207 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
IFT20-216ENST00000588477 CCDC93Q567U6 631 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 EAPPQ56P03 285 aaPredicted RBP20.57■□□□□ 0.88
IFT20-216ENST00000588477 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
IFT20-216ENST00000588477 C7orf43Q8WVR3 580 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 PRDM10Q9NQV6 1147 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 USP16Q9Y5T5 823 aa20.57■□□□□ 0.88
IFT20-216ENST00000588477 ITGBL1O95965 494 aaPredicted RBP20.56■□□□□ 0.88
IFT20-216ENST00000588477 AIDAQ96BJ3 306 aa20.56■□□□□ 0.88
IFT20-216ENST00000588477 CLEC11AQ9Y240 323 aa20.56■□□□□ 0.88
IFT20-216ENST00000588477 NPR1P16066 1061 aa20.55■□□□□ 0.88
IFT20-216ENST00000588477 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
IFT20-216ENST00000588477 ZNF277Q9NRM2 450 aaPredicted RBP20.55■□□□□ 0.88
IFT20-216ENST00000588477 CEMIPQ8WUJ3 1361 aa20.55■□□□□ 0.88
IFT20-216ENST00000588477 ZNF541Q9H0D2 1346 aa20.54■□□□□ 0.88
IFT20-216ENST00000588477 PRAMEF22A3QJZ6 481 aa20.54■□□□□ 0.88
IFT20-216ENST00000588477 CTCFP49711 727 aaPredicted RBP20.54■□□□□ 0.88
IFT20-216ENST00000588477 OLFM4Q6UX06 510 aa20.54■□□□□ 0.88
IFT20-216ENST00000588477 CLEC4GQ6UXB4 293 aa20.54■□□□□ 0.88
IFT20-216ENST00000588477 HACL1Q9UJ83 578 aa20.54■□□□□ 0.88
IFT20-216ENST00000588477 ZNF652Q9Y2D9 606 aa20.53■□□□□ 0.88
IFT20-216ENST00000588477 NUP98P52948 1817 aa20.53■□□□□ 0.88
IFT20-216ENST00000588477 EPHX2P34913 555 aa20.52■□□□□ 0.88
IFT20-216ENST00000588477 TPTE2Q6XPS3 522 aa20.52■□□□□ 0.88
IFT20-216ENST00000588477 PHACTR3Q96KR7 559 aa20.52■□□□□ 0.88
IFT20-216ENST00000588477 KLRG2A4D1S0 409 aaPredicted RBP20.51■□□□□ 0.87
IFT20-216ENST00000588477 FAM177BA6PVY3 158 aa20.51■□□□□ 0.87
IFT20-216ENST00000588477 LBX1P52954 281 aa20.51■□□□□ 0.87
IFT20-216ENST00000588477 WBP1LQ9NX94 342 aa20.51■□□□□ 0.87
IFT20-216ENST00000588477 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
IFT20-216ENST00000588477 DEFB115Q30KQ5 88 aa20.5■□□□□ 0.87
IFT20-216ENST00000588477 RTKN2Q8IZC4 609 aa20.5■□□□□ 0.87
IFT20-216ENST00000588477 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
IFT20-216ENST00000588477 TRPM7Q96QT4 1865 aa20.5■□□□□ 0.87
IFT20-216ENST00000588477 SNRPA1P09661 255 aaKnown RBP20.49■□□□□ 0.87
IFT20-216ENST00000588477 PRKAR2BP31323 418 aa20.49■□□□□ 0.87
IFT20-216ENST00000588477 MAP1SQ66K74 1059 aaPredicted RBP20.49■□□□□ 0.87
IFT20-216ENST00000588477 PNMA8AQ86V59 439 aaPredicted RBP20.49■□□□□ 0.87
IFT20-216ENST00000588477 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
IFT20-216ENST00000588477 ALDH1B1P30837 517 aa20.48■□□□□ 0.87
IFT20-216ENST00000588477 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
IFT20-216ENST00000588477 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
IFT20-216ENST00000588477 LAMB4A4D0S4 1761 aa20.47■□□□□ 0.87
IFT20-216ENST00000588477 RASSF10A6NK89 507 aa20.47■□□□□ 0.87
IFT20-216ENST00000588477 FZD9O00144 591 aa20.47■□□□□ 0.87
IFT20-216ENST00000588477 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
IFT20-216ENST00000588477 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
IFT20-216ENST00000588477 GTF2E1P29083 439 aaPredicted RBP20.46■□□□□ 0.87
IFT20-216ENST00000588477 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
IFT20-216ENST00000588477 MCM10Q7L590 875 aa20.46■□□□□ 0.87
IFT20-216ENST00000588477 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
IFT20-216ENST00000588477 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
IFT20-216ENST00000588477 NPC1L1Q9UHC9 1359 aa20.46■□□□□ 0.87
IFT20-216ENST00000588477 LTBP1Q14766 1721 aa20.45■□□□□ 0.86
IFT20-216ENST00000588477 HLFQ16534 295 aa20.45■□□□□ 0.86
IFT20-216ENST00000588477 GPC2Q8N158 579 aa20.45■□□□□ 0.86
IFT20-216ENST00000588477 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
IFT20-216ENST00000588477 RTF1Q92541 710 aaKnown RBP20.45■□□□□ 0.86
IFT20-216ENST00000588477 DLG5Q8TDM6 1919 aa20.45■□□□□ 0.86
IFT20-216ENST00000588477 HSPA8P11142 646 aaKnown RBP20.44■□□□□ 0.86
IFT20-216ENST00000588477 JDP2Q8WYK2 163 aa20.44■□□□□ 0.86
IFT20-216ENST00000588477 ABT1Q9ULW3 272 aaKnown RBP20.44■□□□□ 0.86
IFT20-216ENST00000588477 RGL2O15211 777 aa20.43■□□□□ 0.86
IFT20-216ENST00000588477 GJA3Q9Y6H8 435 aa20.43■□□□□ 0.86
IFT20-216ENST00000588477 MAP2K1Q02750 393 aaPredicted RBP20.42■□□□□ 0.86
IFT20-216ENST00000588477 DCTN1Q14203 1278 aa20.42■□□□□ 0.86
IFT20-216ENST00000588477 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
IFT20-216ENST00000588477 PSMD1Q99460 953 aa20.42■□□□□ 0.86
IFT20-216ENST00000588477 COL4A5P29400 1685 aa20.42■□□□□ 0.86
IFT20-216ENST00000588477 EIF6P56537 245 aaKnown RBP20.41■□□□□ 0.86
IFT20-216ENST00000588477 ABHD8Q96I13 439 aa20.41■□□□□ 0.86
IFT20-216ENST00000588477 DDX21Q9NR30 783 aaKnown RBP eCLIP20.41■□□□□ 0.86
IFT20-216ENST00000588477 SNED1Q8TER0 1413 aa20.41■□□□□ 0.86
IFT20-216ENST00000588477 FMR1Q06787 632 aaKnown RBP eCLIP20.4■□□□□ 0.86
IFT20-216ENST00000588477 NUTM1Q86Y26 1132 aa20.4■□□□□ 0.86
IFT20-216ENST00000588477 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms