RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 INTS5Q6P9B9 1019 aaKnown RBP27.79■■■□□ 2.04
RBM42-203ENST00000588161 USP44Q9H0E7 712 aa27.79■■■□□ 2.04
RBM42-203ENST00000588161 C1orf115Q9H7X2 142 aa27.78■■■□□ 2.04
RBM42-203ENST00000588161 RREB1Q92766 1687 aa27.77■■■□□ 2.04
RBM42-203ENST00000588161 GNAI2P04899 355 aa27.76■■■□□ 2.03
RBM42-203ENST00000588161 KIF6Q6ZMV9 814 aa27.76■■■□□ 2.03
RBM42-203ENST00000588161 MYD88Q99836 296 aa27.76■■■□□ 2.03
RBM42-203ENST00000588161 ZNF330Q9Y3S2 320 aaPredicted RBP27.76■■■□□ 2.03
RBM42-203ENST00000588161 LY75O60449 1722 aa27.76■■■□□ 2.03
RBM42-203ENST00000588161 COL5A3P25940 1745 aaPredicted RBP27.76■■■□□ 2.03
RBM42-203ENST00000588161 TRIM37O94972 964 aa27.75■■■□□ 2.03
RBM42-203ENST00000588161 NPM2Q86SE8 214 aaKnown RBP27.75■■■□□ 2.03
RBM42-203ENST00000588161 CCNL1Q9UK58 526 aaPredicted RBP27.75■■■□□ 2.03
RBM42-203ENST00000588161 ARFGEF2Q9Y6D5 1785 aa27.75■■■□□ 2.03
RBM42-203ENST00000588161 IGKV5-2P06315 115 aa27.74■■■□□ 2.03
RBM42-203ENST00000588161 EIF5P55010 431 aaKnown RBP27.74■■■□□ 2.03
RBM42-203ENST00000588161 CWF19L2Q2TBE0 894 aaKnown RBP27.74■■■□□ 2.03
RBM42-203ENST00000588161 RPAP2Q8IXW5 612 aaPredicted RBP27.74■■■□□ 2.03
RBM42-203ENST00000588161 LINC00116Q8NCU8 138 aa27.74■■■□□ 2.03
RBM42-203ENST00000588161 CNTNAP4Q9C0A0 1308 aa27.74■■■□□ 2.03
RBM42-203ENST00000588161 NEURL1BA8MQ27 555 aa27.74■■■□□ 2.03
RBM42-203ENST00000588161 UBTFL1P0CB47 393 aaPredicted RBP27.74■■■□□ 2.03
RBM42-203ENST00000588161 ZBTB3Q9H5J0 574 aa27.73■■■□□ 2.03
RBM42-203ENST00000588161 NUP188Q5SRE5 1749 aa27.73■■■□□ 2.03
RBM42-203ENST00000588161 MAP3K15Q6ZN16 1313 aa27.72■■■□□ 2.03
RBM42-203ENST00000588161 RC3H1Q5TC82 1133 aaKnown RBP27.72■■■□□ 2.03
RBM42-203ENST00000588161 HDAC5Q9UQL6 1122 aa27.72■■■□□ 2.03
RBM42-203ENST00000588161 ANKRD44Q8N8A2 993 aa27.71■■■□□ 2.03
RBM42-203ENST00000588161 C9orf78Q9NZ63 289 aaPredicted RBP27.71■■■□□ 2.03
RBM42-203ENST00000588161 UTYO14607 1347 aa27.71■■■□□ 2.03
RBM42-203ENST00000588161 CEP85Q6P2H3 762 aa27.7■■■□□ 2.03
RBM42-203ENST00000588161 NBPF7P0C2Y1 421 aaPredicted RBP27.7■■■□□ 2.02
RBM42-203ENST00000588161 GCKRQ14397 625 aa27.7■■■□□ 2.02
RBM42-203ENST00000588161 SIRT2Q8IXJ6 389 aa27.7■■■□□ 2.02
RBM42-203ENST00000588161 MYH14Q7Z406 1995 aaKnown RBP27.69■■■□□ 2.02
RBM42-203ENST00000588161 ERVV-1B6SEH8 477 aa27.69■■■□□ 2.02
RBM42-203ENST00000588161 GRM8O00222 908 aa27.69■■■□□ 2.02
RBM42-203ENST00000588161 KCNQ4P56696 695 aa27.69■■■□□ 2.02
RBM42-203ENST00000588161 DZIP3Q86Y13 1208 aaKnown RBP27.69■■■□□ 2.02
RBM42-203ENST00000588161 PELP1Q8IZL8 1130 aaKnown RBP27.69■■■□□ 2.02
RBM42-203ENST00000588161 LRRFIP2Q9Y608 721 aaKnown RBP27.68■■■□□ 2.02
RBM42-203ENST00000588161 TCIRG1Q13488 830 aa27.67■■■□□ 2.02
RBM42-203ENST00000588161 SLC27A3Q5K4L6 730 aa27.67■■■□□ 2.02
RBM42-203ENST00000588161 GIGYF2Q6Y7W6 1299 aaKnown RBP27.67■■■□□ 2.02
RBM42-203ENST00000588161 ARXQ96QS3 562 aa27.67■■■□□ 2.02
RBM42-203ENST00000588161 ATP5J2-PTCD1G3V325 749 aa27.67■■■□□ 2.02
RBM42-203ENST00000588161 HSP90AB3PQ58FF7 597 aa27.67■■■□□ 2.02
RBM42-203ENST00000588161 HMGB2P26583 209 aaKnown RBP27.66■■■□□ 2.02
RBM42-203ENST00000588161 TRIM28Q13263 835 aaKnown RBP27.66■■■□□ 2.02
RBM42-203ENST00000588161 CCDC191Q8NCU4 936 aa27.66■■■□□ 2.02
RBM42-203ENST00000588161 ISCA1Q9BUE6 129 aa27.66■■■□□ 2.02
RBM42-203ENST00000588161 A0A087WZG4 1122 aa27.65■■■□□ 2.02
RBM42-203ENST00000588161 SMC5Q8IY18 1101 aa27.65■■■□□ 2.02
RBM42-203ENST00000588161 HMMRO75330 724 aa27.64■■■□□ 2.02
RBM42-203ENST00000588161 CWC25Q9NXE8 425 aaPredicted RBP27.64■■■□□ 2.02
RBM42-203ENST00000588161 TBC1D2BQ9UPU7 963 aa27.64■■■□□ 2.02
RBM42-203ENST00000588161 COL15A1P39059 1388 aa27.64■■■□□ 2.02
RBM42-203ENST00000588161 PLSCR1O15162 318 aa27.63■■■□□ 2.01
RBM42-203ENST00000588161 RPS6KA4O75676 772 aa27.63■■■□□ 2.01
RBM42-203ENST00000588161 ATP8B2P98198 1209 aa27.63■■■□□ 2.01
RBM42-203ENST00000588161 GCC1Q96CN9 775 aa27.63■■■□□ 2.01
RBM42-203ENST00000588161 TAF1LQ8IZX4 1826 aa27.63■■■□□ 2.01
RBM42-203ENST00000588161 HLFQ16534 295 aa27.63■■■□□ 2.01
RBM42-203ENST00000588161 AFDNP55196 1824 aaKnown RBP27.62■■■□□ 2.01
RBM42-203ENST00000588161 LRRC4BQ9NT99 713 aa27.62■■■□□ 2.01
RBM42-203ENST00000588161 EP400Q96L91 3159 aa27.61■■■□□ 2.01
RBM42-203ENST00000588161 ILDR1Q86SU0 546 aaPredicted RBP27.6■■■□□ 2.01
RBM42-203ENST00000588161 CAMTA2O94983 1202 aa27.59■■■□□ 2.01
RBM42-203ENST00000588161 APBA3O96018 575 aa27.59■■■□□ 2.01
RBM42-203ENST00000588161 DCTPP1Q9H773 170 aa27.59■■■□□ 2.01
RBM42-203ENST00000588161 C4BP0C0L5 1744 aa27.59■■■□□ 2.01
RBM42-203ENST00000588161 H7C1W4 665 aa27.59■■■□□ 2.01
RBM42-203ENST00000588161 RGL2O15211 777 aa27.59■■■□□ 2.01
RBM42-203ENST00000588161 RTCBQ9Y3I0 505 aaKnown RBP27.59■■■□□ 2.01
RBM42-203ENST00000588161 GNPATO15228 680 aa27.58■■■□□ 2.01
RBM42-203ENST00000588161 MTX1Q13505 466 aa27.58■■■□□ 2.01
RBM42-203ENST00000588161 SUCLG2Q96I99 432 aa27.58■■■□□ 2.01
RBM42-203ENST00000588161 CASP7P55210 303 aa27.57■■■□□ 2
RBM42-203ENST00000588161 TXNRD1Q16881 649 aa27.57■■■□□ 2
RBM42-203ENST00000588161 PNMA6EA0A0J9YXQ4 647 aa27.56■■■□□ 2
RBM42-203ENST00000588161 UBE3BQ7Z3V4 1068 aa27.56■■■□□ 2
RBM42-203ENST00000588161 SSH3Q8TE77 659 aa27.56■■■□□ 2
RBM42-203ENST00000588161 AK7Q96M32 723 aa27.56■■■□□ 2
RBM42-203ENST00000588161 NUP98P52948 1817 aa27.56■■■□□ 2
RBM42-203ENST00000588161 CLEC4GQ6UXB4 293 aa27.56■■■□□ 2
RBM42-203ENST00000588161 PPP1R42Q7Z4L9 355 aa27.56■■■□□ 2
RBM42-203ENST00000588161 ZNF34Q8IZ26 560 aa27.56■■■□□ 2
RBM42-203ENST00000588161 KAZALD1Q96I82 304 aa27.56■■■□□ 2
RBM42-203ENST00000588161 PDZRN3Q9UPQ7 1066 aa27.56■■■□□ 2
RBM42-203ENST00000588161 ANKRD36CQ5JPF3 1778 aa27.55■■■□□ 2
RBM42-203ENST00000588161 NLRP10Q86W26 655 aa27.55■■■□□ 2
RBM42-203ENST00000588161 PROM2Q8N271 834 aa27.55■■■□□ 2
RBM42-203ENST00000588161 ZNF652Q9Y2D9 606 aa27.55■■■□□ 2
RBM42-203ENST00000588161 POLA2Q14181 598 aa27.54■■■□□ 2
RBM42-203ENST00000588161 BICC1Q9H694 974 aaKnown RBP27.53■■■□□ 2
RBM42-203ENST00000588161 TNS1Q9HBL0 1735 aaKnown RBP27.53■■■□□ 2
RBM42-203ENST00000588161 SRGAP3O43295 1099 aa27.52■■■□□ 2
RBM42-203ENST00000588161 PCCAP05165 728 aaPredicted RBP27.52■■■□□ 2
RBM42-203ENST00000588161 GPTP24298 496 aa27.52■■■□□ 2
RBM42-203ENST00000588161 NUCB1Q02818 461 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms