RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
TPM4-207ENST00000588032 DBF4Q9UBU7 674 aaPredicted RBP13.09□□□□□ -0.31
TPM4-207ENST00000588032 MAP3K15Q6ZN16 1313 aa13.09□□□□□ -0.31
TPM4-207ENST00000588032 POTEHQ6S545 545 aa13.08□□□□□ -0.32
TPM4-207ENST00000588032 PDZRN3Q9UPQ7 1066 aa13.08□□□□□ -0.32
TPM4-207ENST00000588032 A0A0G2JLW4 131 aa13.07□□□□□ -0.32
TPM4-207ENST00000588032 TPTE2Q6XPS3 522 aa13.07□□□□□ -0.32
TPM4-207ENST00000588032 LRP10Q7Z4F1 713 aa13.07□□□□□ -0.32
TPM4-207ENST00000588032 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
TPM4-207ENST00000588032 HYPKQ9NX55 129 aa13.07□□□□□ -0.32
TPM4-207ENST00000588032 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
TPM4-207ENST00000588032 SALL2Q9Y467 1007 aaPredicted RBP13.07□□□□□ -0.32
TPM4-207ENST00000588032 SCN7AQ01118 1682 aa13.07□□□□□ -0.32
TPM4-207ENST00000588032 SRCAPQ6ZRS2 3230 aa13.07□□□□□ -0.32
TPM4-207ENST00000588032 NPHP1O15259 732 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 DPEP1P16444 411 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 PDE6BP35913 854 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 HLFQ16534 295 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 GIGYF2Q6Y7W6 1299 aaKnown RBP13.06□□□□□ -0.32
TPM4-207ENST00000588032 TTLL7Q6ZT98 887 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 COPS6Q7L5N1 327 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 CNBD1Q8NA66 436 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 C8orf58Q8NAV2 365 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 NECTIN2Q92692 538 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 BRIP1Q9BX63 1249 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 PIM2Q9P1W9 311 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
TPM4-207ENST00000588032 PXDNLA1KZ92 1463 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 SENP3-EIF4A1A0A087X0R7 540 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 ELL2O00472 640 aaPredicted RBP13.05□□□□□ -0.32
TPM4-207ENST00000588032 ST5P78524 1137 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 PROSER3Q2NL68 480 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 CCDC30Q5VVM6 783 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 PRR5LQ6MZQ0 368 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 NBPF5PQ86XG9 351 aaPredicted RBP13.05□□□□□ -0.32
TPM4-207ENST00000588032 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 MYH16Q9H6N6 1097 aa13.05□□□□□ -0.32
TPM4-207ENST00000588032 H0YIN7 160 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 ANXA1P04083 346 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 YBX3P16989 372 aaKnown RBP eCLIP13.04□□□□□ -0.327e-9■□□□□ 9.5
TPM4-207ENST00000588032 KCNA3P22001 575 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 XAGE3Q8WTP9 111 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
TPM4-207ENST00000588032 NYXQ9GZU5 481 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 NRXN2Q9P2S2 1712 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 BCORQ6W2J9 1755 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 ATP10DQ9P241 1426 aa13.04□□□□□ -0.32
TPM4-207ENST00000588032 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
TPM4-207ENST00000588032 AIMP1Q12904 312 aaKnown RBP13.03□□□□□ -0.32
TPM4-207ENST00000588032 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
TPM4-207ENST00000588032 PARP10Q53GL7 1025 aa13.03□□□□□ -0.32
TPM4-207ENST00000588032 ANKRD13DQ6ZTN6 518 aa13.03□□□□□ -0.32
TPM4-207ENST00000588032 ZNF34Q8IZ26 560 aa13.03□□□□□ -0.32
TPM4-207ENST00000588032 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
TPM4-207ENST00000588032 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 DALRD3Q5D0E6 543 aaKnown RBP13.02□□□□□ -0.33
TPM4-207ENST00000588032 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 C2CD5Q86YS7 1000 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 MIER1Q8N108 512 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 STK31Q9BXU1 1019 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 BCS1LQ9Y276 419 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 FANCIQ9NVI1 1328 aa13.02□□□□□ -0.33
TPM4-207ENST00000588032 YY1P25490 414 aa13.01□□□□□ -0.33
TPM4-207ENST00000588032 CHRNA5P30532 468 aa13.01□□□□□ -0.33
TPM4-207ENST00000588032 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
TPM4-207ENST00000588032 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
TPM4-207ENST00000588032 AFDNP55196 1824 aaKnown RBP13.01□□□□□ -0.33
TPM4-207ENST00000588032 KLRG2A4D1S0 409 aaPredicted RBP13□□□□□ -0.33
TPM4-207ENST00000588032 DDX58O95786 925 aaKnown RBP13□□□□□ -0.33
TPM4-207ENST00000588032 GPTP24298 496 aa13□□□□□ -0.33
TPM4-207ENST00000588032 TTLL6Q8N841 843 aa13□□□□□ -0.33
TPM4-207ENST00000588032 RNF123Q5XPI4 1314 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 UBN2Q6ZU65 1347 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 FAM177BA6PVY3 158 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 VAMP4O75379 141 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 CNKSR1Q969H4 720 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
TPM4-207ENST00000588032 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
TPM4-207ENST00000588032 WWC3Q9ULE0 1092 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 KIAA1551Q9HCM1 1747 aa12.99□□□□□ -0.33
TPM4-207ENST00000588032 E9PSI1 815 aa12.98□□□□□ -0.33
TPM4-207ENST00000588032 SRGNP10124 158 aa12.98□□□□□ -0.33
TPM4-207ENST00000588032 EXOSC9Q06265 439 aaKnown RBP12.98□□□□□ -0.33
TPM4-207ENST00000588032 TRIM28Q13263 835 aaKnown RBP12.98□□□□□ -0.33
TPM4-207ENST00000588032 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
TPM4-207ENST00000588032 CCDC24Q8N4L8 307 aa12.98□□□□□ -0.33
TPM4-207ENST00000588032 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.334e-7■■□□□ 11.9
TPM4-207ENST00000588032 MASTLQ96GX5 879 aa12.98□□□□□ -0.33
TPM4-207ENST00000588032 PHAXQ9H814 394 aaKnown RBP12.98□□□□□ -0.33
TPM4-207ENST00000588032 N4BP2Q86UW6 1770 aaPredicted RBP12.98□□□□□ -0.33
TPM4-207ENST00000588032 NUP98P52948 1817 aa12.97□□□□□ -0.33
TPM4-207ENST00000588032 NTSR2O95665 410 aa12.97□□□□□ -0.33
TPM4-207ENST00000588032 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
TPM4-207ENST00000588032 NPR1P16066 1061 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms