RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 BRPF3Q9ULD4 1205 aa28.32■■■□□ 2.12
R3HDM4-203ENST00000587975 CYP27B1O15528 508 aa28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 BAG4O95429 457 aaKnown RBP28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 SLC39A6Q13433 755 aa28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 CUL4AQ13619 759 aa28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 RIC3Q7Z5B4 369 aa28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 TTC5Q8N0Z6 440 aa28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 INTS4Q96HW7 963 aaKnown RBP28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 FMNL2Q96PY5 1086 aa28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 METTL22Q9BUU2 404 aaPredicted RBP28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 ECHDC1Q9NTX5 307 aa28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 XIRP1Q702N8 1843 aaKnown RBP28.31■■■□□ 2.12
R3HDM4-203ENST00000587975 RAD50Q92878 1312 aa28.3■■■□□ 2.12
R3HDM4-203ENST00000587975 SUCLG2Q96I99 432 aa28.3■■■□□ 2.12
R3HDM4-203ENST00000587975 ZNF496Q96IT1 587 aaPredicted RBP28.3■■■□□ 2.12
R3HDM4-203ENST00000587975 KAZALD1Q96I82 304 aa28.29■■■□□ 2.12
R3HDM4-203ENST00000587975 ERBB4Q15303 1308 aa28.29■■■□□ 2.12
R3HDM4-203ENST00000587975 IGKV5-2P06315 115 aa28.29■■■□□ 2.12
R3HDM4-203ENST00000587975 LRP10Q7Z4F1 713 aa28.29■■■□□ 2.12
R3HDM4-203ENST00000587975 NEURL1BA8MQ27 555 aa28.28■■■□□ 2.12
R3HDM4-203ENST00000587975 CABLES1Q8TDN4 633 aa28.28■■■□□ 2.12
R3HDM4-203ENST00000587975 BRINP3Q76B58 766 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 RUFY2Q8WXA3 655 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 TMX3Q96JJ7 454 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 PALD1Q9ULE6 856 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 LAMB4A4D0S4 1761 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 IFIT2P09913 472 aaKnown RBP28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 GCKRQ14397 625 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 CHRNA2Q15822 529 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 XAGE3Q8WTP9 111 aa28.27■■■□□ 2.12
R3HDM4-203ENST00000587975 STRCQ7RTU9 1775 aa28.26■■■□□ 2.11
R3HDM4-203ENST00000587975 MRE11P49959 708 aa28.26■■■□□ 2.11
R3HDM4-203ENST00000587975 AIMP1Q12904 312 aaKnown RBP28.26■■■□□ 2.11
R3HDM4-203ENST00000587975 BICC1Q9H694 974 aaKnown RBP28.26■■■□□ 2.11
R3HDM4-203ENST00000587975 G3BP1Q13283 466 aaKnown RBP eCLIP28.25■■■□□ 2.11
R3HDM4-203ENST00000587975 COPS6Q7L5N1 327 aa28.25■■■□□ 2.11
R3HDM4-203ENST00000587975 WDR17Q8IZU2 1322 aa28.25■■■□□ 2.11
R3HDM4-203ENST00000587975 KLHL40Q2TBA0 621 aa28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 ANKRD13DQ6ZTN6 518 aa28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 LSG1Q9H089 658 aaKnown RBP28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 GZF1Q9H116 711 aaPredicted RBP28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 GLI3P10071 1580 aa28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 SOS2Q07890 1332 aaPredicted RBP28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 CABP4P57796 275 aa28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 EVI5LQ96CN4 794 aa28.24■■■□□ 2.11
R3HDM4-203ENST00000587975 HIP1O00291 1037 aa28.23■■■□□ 2.11
R3HDM4-203ENST00000587975 KIAA1211Q6ZU35 1233 aa28.23■■■□□ 2.11
R3HDM4-203ENST00000587975 ZGPATQ8N5A5 531 aaKnown RBP28.23■■■□□ 2.11
R3HDM4-203ENST00000587975 PCDH11XQ9BZA7 1347 aa28.22■■■□□ 2.11
R3HDM4-203ENST00000587975 PCDH11YQ9BZA8 1340 aa28.22■■■□□ 2.11
R3HDM4-203ENST00000587975 IL25Q9H293 177 aa28.22■■■□□ 2.11
R3HDM4-203ENST00000587975 PA2G4Q9UQ80 394 aaKnown RBP28.22■■■□□ 2.11
R3HDM4-203ENST00000587975 MYL6BP14649 208 aa28.21■■■□□ 2.11
R3HDM4-203ENST00000587975 SASH1O94885 1247 aa28.2■■■□□ 2.11
R3HDM4-203ENST00000587975 XRCC6P12956 609 aaKnown RBP eCLIP28.2■■■□□ 2.11
R3HDM4-203ENST00000587975 AACSQ86V21 672 aa28.2■■■□□ 2.11
R3HDM4-203ENST00000587975 DIAPH3Q9NSV4 1193 aa28.2■■■□□ 2.11
R3HDM4-203ENST00000587975 USP16Q9Y5T5 823 aa28.2■■■□□ 2.11
R3HDM4-203ENST00000587975 ERVV-2B6SEH9 535 aa28.19■■■□□ 2.1
R3HDM4-203ENST00000587975 MYD88Q99836 296 aa28.19■■■□□ 2.1
R3HDM4-203ENST00000587975 MAP4K4O95819 1239 aaPredicted RBP28.19■■■□□ 2.1
R3HDM4-203ENST00000587975 NKX1-1Q15270 411 aaPredicted RBP28.19■■■□□ 2.1
R3HDM4-203ENST00000587975 COPRSQ9NQ92 184 aa28.19■■■□□ 2.1
R3HDM4-203ENST00000587975 COL5A2P05997 1499 aaPredicted RBP28.18■■■□□ 2.1
R3HDM4-203ENST00000587975 RABL6Q3YEC7 729 aaPredicted RBP28.17■■■□□ 2.1
R3HDM4-203ENST00000587975 PLBD2Q8NHP8 589 aa28.17■■■□□ 2.1
R3HDM4-203ENST00000587975 KCNB2Q92953 911 aa28.17■■■□□ 2.1
R3HDM4-203ENST00000587975 PRDM11Q9NQV5 511 aa28.17■■■□□ 2.1
R3HDM4-203ENST00000587975 SNRKQ9NRH2 765 aa28.17■■■□□ 2.1
R3HDM4-203ENST00000587975 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
R3HDM4-203ENST00000587975 ZDHHC9Q9Y397 364 aa28.16■■■□□ 2.1
R3HDM4-203ENST00000587975 SNX14Q9Y5W7 946 aa28.16■■■□□ 2.1
R3HDM4-203ENST00000587975 UBR2Q8IWV8 1755 aa28.16■■■□□ 2.1
R3HDM4-203ENST00000587975 ARFGEF2Q9Y6D5 1785 aa28.16■■■□□ 2.1
R3HDM4-203ENST00000587975 CWC27Q6UX04 472 aaKnown RBP28.15■■■□□ 2.1
R3HDM4-203ENST00000587975 EAF2Q96CJ1 260 aaPredicted RBP28.15■■■□□ 2.1
R3HDM4-203ENST00000587975 PAPPAQ13219 1627 aa28.15■■■□□ 2.1
R3HDM4-203ENST00000587975 BRD1O95696 1058 aa28.14■■■□□ 2.1
R3HDM4-203ENST00000587975 CARD10Q9BWT7 1032 aa28.14■■■□□ 2.1
R3HDM4-203ENST00000587975 GRPEL1Q9HAV7 217 aa28.14■■■□□ 2.1
R3HDM4-203ENST00000587975 PKP1Q13835 747 aa28.14■■■□□ 2.09
R3HDM4-203ENST00000587975 TTC14Q96N46 770 aa28.14■■■□□ 2.09
R3HDM4-203ENST00000587975 TM6SF1Q9BZW5 370 aa28.14■■■□□ 2.09
R3HDM4-203ENST00000587975 LMBRD1Q9NUN5 540 aa28.14■■■□□ 2.09
R3HDM4-203ENST00000587975 DDX49Q9Y6V7 483 aaKnown RBP28.14■■■□□ 2.09
R3HDM4-203ENST00000587975 MCTP1Q6DN14 999 aa28.13■■■□□ 2.09
R3HDM4-203ENST00000587975 SLAIN2Q9P270 581 aa28.13■■■□□ 2.09
R3HDM4-203ENST00000587975 ABCA3Q99758 1704 aa28.13■■■□□ 2.09
R3HDM4-203ENST00000587975 AFDNP55196 1824 aaKnown RBP28.12■■■□□ 2.09
R3HDM4-203ENST00000587975 TOM1L2Q6ZVM7 507 aa28.11■■■□□ 2.09
R3HDM4-203ENST00000587975 UPF3BQ9BZI7 483 aaKnown RBP28.11■■■□□ 2.09
R3HDM4-203ENST00000587975 RFX5P48382 616 aaPredicted RBP28.11■■■□□ 2.09
R3HDM4-203ENST00000587975 FAM43AQ8N2R8 423 aa28.1■■■□□ 2.09
R3HDM4-203ENST00000587975 RFX7Q2KHR2 1363 aa28.09■■■□□ 2.09
R3HDM4-203ENST00000587975 KCPQ6ZWJ8 1503 aa28.09■■■□□ 2.09
R3HDM4-203ENST00000587975 IL2RBP14784 551 aa28.09■■■□□ 2.09
R3HDM4-203ENST00000587975 CASP7P55210 303 aa28.09■■■□□ 2.09
R3HDM4-203ENST00000587975 EPHA10Q5JZY3 1008 aa28.09■■■□□ 2.09
R3HDM4-203ENST00000587975 TNS2Q63HR2 1409 aa28.09■■■□□ 2.09
R3HDM4-203ENST00000587975 PTPN12Q05209 780 aaKnown RBP28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms