RNA–Protein interactions for RNA: ENST00000587832.5

GCDH-206, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 791 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-206ENST00000587832 NUP98P52948 1817 aa22.81■■□□□ 1.24
GCDH-206ENST00000587832 NEFMP07197 916 aa22.81■■□□□ 1.24
GCDH-206ENST00000587832 ST5P78524 1137 aa22.81■■□□□ 1.24
GCDH-206ENST00000587832 PIP4K2AP48426 406 aaPredicted RBP22.8■■□□□ 1.24
GCDH-206ENST00000587832 STYK1Q6J9G0 422 aa22.8■■□□□ 1.24
GCDH-206ENST00000587832 ZNF622Q969S3 477 aaKnown RBP eCLIP22.8■■□□□ 1.24
GCDH-206ENST00000587832 PLEKHF1Q96S99 279 aa22.8■■□□□ 1.24
GCDH-206ENST00000587832 LTBP3Q9NS15 1303 aa22.8■■□□□ 1.24
GCDH-206ENST00000587832 GLTPD2A6NH11 291 aa22.79■■□□□ 1.24
GCDH-206ENST00000587832 NBPF26B4DH59 902 aa22.79■■□□□ 1.24
GCDH-206ENST00000587832 NBPF10Q6P3W6 841 aaKnown RBP22.79■■□□□ 1.24
GCDH-206ENST00000587832 NBPF15Q8N660 670 aa22.79■■□□□ 1.24
GCDH-206ENST00000587832 PNISRQ8TF01 805 aaKnown RBP22.79■■□□□ 1.24
GCDH-206ENST00000587832 NPHP1O15259 732 aa22.78■■□□□ 1.24
GCDH-206ENST00000587832 SRGNP10124 158 aa22.78■■□□□ 1.24
GCDH-206ENST00000587832 CCDC24Q8N4L8 307 aa22.78■■□□□ 1.24
GCDH-206ENST00000587832 CNKSR1Q969H4 720 aa22.78■■□□□ 1.24
GCDH-206ENST00000587832 RRAGCQ9HB90 399 aa22.78■■□□□ 1.24
GCDH-206ENST00000587832 MASTLQ96GX5 879 aa22.77■■□□□ 1.24
GCDH-206ENST00000587832 C21orf2O43822 256 aa22.76■■□□□ 1.23
GCDH-206ENST00000587832 NFE2L2Q16236 605 aa22.76■■□□□ 1.23
GCDH-206ENST00000587832 NBPF5PQ86XG9 351 aaPredicted RBP22.76■■□□□ 1.23
GCDH-206ENST00000587832 DNAJC5GQ8N7S2 189 aa22.76■■□□□ 1.23
GCDH-206ENST00000587832 PNNQ9H307 717 aaKnown RBP22.76■■□□□ 1.23
GCDH-206ENST00000587832 SOGA3Q5TF21 947 aa22.75■■□□□ 1.23
GCDH-206ENST00000587832 KLRG2A4D1S0 409 aaPredicted RBP22.74■■□□□ 1.23
GCDH-206ENST00000587832 VEGFAP15692 232 aaPredicted RBP22.74■■□□□ 1.23
GCDH-206ENST00000587832 PRPF40BQ6NWY9 871 aaKnown RBP22.74■■□□□ 1.23
GCDH-206ENST00000587832 SMC1BQ8NDV3 1235 aa22.74■■□□□ 1.23
GCDH-206ENST00000587832 TPTE2Q6XPS3 522 aa22.73■■□□□ 1.23
GCDH-206ENST00000587832 TAOK3Q9H2K8 898 aa22.73■■□□□ 1.23
GCDH-206ENST00000587832 MIS18AQ9NYP9 233 aa22.73■■□□□ 1.23
GCDH-206ENST00000587832 NIP7Q9Y221 180 aaKnown RBP eCLIP22.72■■□□□ 1.23
GCDH-206ENST00000587832 MAPK8IP3Q9UPT6 1336 aa22.72■■□□□ 1.23
GCDH-206ENST00000587832 EIF4A1P60842 406 aaKnown RBP22.71■■□□□ 1.23
GCDH-206ENST00000587832 NPR1P16066 1061 aa22.7■■□□□ 1.22
GCDH-206ENST00000587832 ERFEQ4G0M1 354 aa22.7■■□□□ 1.22
GCDH-206ENST00000587832 DPY19L2Q6NUT2 758 aa22.7■■□□□ 1.22
GCDH-206ENST00000587832 ZNF219Q9P2Y4 722 aaPredicted RBP22.7■■□□□ 1.22
GCDH-206ENST00000587832 RIC1Q4ADV7 1423 aa22.7■■□□□ 1.22
GCDH-206ENST00000587832 IBTKQ9P2D0 1353 aaPredicted RBP22.69■■□□□ 1.22
GCDH-206ENST00000587832 ERVV-1B6SEH8 477 aa22.69■■□□□ 1.22
GCDH-206ENST00000587832 RALBP1Q15311 655 aa22.69■■□□□ 1.22
GCDH-206ENST00000587832 C7orf43Q8WVR3 580 aa22.69■■□□□ 1.22
GCDH-206ENST00000587832 SCN4AP35499 1836 aa22.68■■□□□ 1.22
GCDH-206ENST00000587832 ERBB4Q15303 1308 aa22.68■■□□□ 1.22
GCDH-206ENST00000587832 HLFQ16534 295 aa22.68■■□□□ 1.22
GCDH-206ENST00000587832 THUMPD2Q9BTF0 503 aaKnown RBP22.68■■□□□ 1.22
GCDH-206ENST00000587832 MAP3K15Q6ZN16 1313 aa22.67■■□□□ 1.22
GCDH-206ENST00000587832 IFFO2Q5TF58 517 aa22.67■■□□□ 1.22
GCDH-206ENST00000587832 ANKRD36CQ5JPF3 1778 aa22.67■■□□□ 1.22
GCDH-206ENST00000587832 POTECB2RU33 542 aa22.66■■□□□ 1.22
GCDH-206ENST00000587832 CCDC93Q567U6 631 aa22.66■■□□□ 1.22
GCDH-206ENST00000587832 KLRG1Q96E93 195 aa22.65■■□□□ 1.22
GCDH-206ENST00000587832 NYXQ9GZU5 481 aa22.65■■□□□ 1.22
GCDH-206ENST00000587832 CRY2Q49AN0 593 aa22.64■■□□□ 1.21
GCDH-206ENST00000587832 KIF6Q6ZMV9 814 aa22.64■■□□□ 1.21
GCDH-206ENST00000587832 JMYQ8N9B5 988 aa22.64■■□□□ 1.21
GCDH-206ENST00000587832 BABAM1Q9NWV8 329 aa22.64■■□□□ 1.21
GCDH-206ENST00000587832 SNED1Q8TER0 1413 aa22.64■■□□□ 1.21
GCDH-206ENST00000587832 ABCC12Q96J65 1359 aa22.63■■□□□ 1.21
GCDH-206ENST00000587832 ALDH1B1P30837 517 aa22.62■■□□□ 1.21
GCDH-206ENST00000587832 HTRA3P83110 453 aa22.62■■□□□ 1.21
GCDH-206ENST00000587832 FKBP4Q02790 459 aaKnown RBP eCLIP22.62■■□□□ 1.21
GCDH-206ENST00000587832 RRP7AQ9Y3A4 280 aaKnown RBP22.62■■□□□ 1.21
GCDH-206ENST00000587832 FAM177BA6PVY3 158 aa22.61■■□□□ 1.21
GCDH-206ENST00000587832 GTF2E1P29083 439 aaPredicted RBP22.61■■□□□ 1.21
GCDH-206ENST00000587832 LMOD3Q0VAK6 560 aa22.61■■□□□ 1.21
GCDH-206ENST00000587832 TTLL7Q6ZT98 887 aa22.61■■□□□ 1.21
GCDH-206ENST00000587832 RTKN2Q8IZC4 609 aa22.61■■□□□ 1.21
GCDH-206ENST00000587832 TSPYL4Q9UJ04 414 aa22.61■■□□□ 1.21
GCDH-206ENST00000587832 UBN2Q6ZU65 1347 aa22.6■■□□□ 1.21
GCDH-206ENST00000587832 MYBBP1AQ9BQG0 1328 aaKnown RBP22.6■■□□□ 1.21
GCDH-206ENST00000587832 RIPK4P57078 832 aa22.6■■□□□ 1.21
GCDH-206ENST00000587832 NGEFQ8N5V2 710 aa22.6■■□□□ 1.21
GCDH-206ENST00000587832 L3MBTL3Q96JM7 780 aaPredicted RBP22.6■■□□□ 1.21
GCDH-206ENST00000587832 MYL6BP14649 208 aa22.59■■□□□ 1.21
GCDH-206ENST00000587832 LRP10Q7Z4F1 713 aa22.59■■□□□ 1.21
GCDH-206ENST00000587832 ZNF34Q8IZ26 560 aa22.59■■□□□ 1.21
GCDH-206ENST00000587832 DDNO94850 711 aaPredicted RBP22.58■■□□□ 1.21
GCDH-206ENST00000587832 TMPOP42166 694 aaKnown RBP22.58■■□□□ 1.21
GCDH-206ENST00000587832 GIGYF2Q6Y7W6 1299 aaKnown RBP22.58■■□□□ 1.21
GCDH-206ENST00000587832 ZBTB3Q9H5J0 574 aa22.58■■□□□ 1.21
GCDH-206ENST00000587832 LAMB2P55268 1798 aa22.58■■□□□ 1.2
GCDH-206ENST00000587832 ADAMTSL1Q8N6G6 1762 aa22.58■■□□□ 1.2
GCDH-206ENST00000587832 HOXA10P31260 410 aaPredicted RBP22.57■■□□□ 1.2
GCDH-206ENST00000587832 NUTM1Q86Y26 1132 aa22.57■■□□□ 1.2
GCDH-206ENST00000587832 IQCA1LA6NCM1 817 aa22.56■■□□□ 1.2
GCDH-206ENST00000587832 PDIA6Q15084 440 aa22.56■■□□□ 1.2
GCDH-206ENST00000587832 CC2D2BQ6DHV5 1058 aa22.56■■□□□ 1.2
GCDH-206ENST00000587832 PSMD1Q99460 953 aa22.56■■□□□ 1.2
GCDH-206ENST00000587832 NTSR2O95665 410 aa22.55■■□□□ 1.2
GCDH-206ENST00000587832 OLFM4Q6UX06 510 aa22.55■■□□□ 1.2
GCDH-206ENST00000587832 ZNF277Q9NRM2 450 aaPredicted RBP22.55■■□□□ 1.2
GCDH-206ENST00000587832 GPTP24298 496 aa22.54■■□□□ 1.2
GCDH-206ENST00000587832 GRIPAP1Q4V328 841 aa22.54■■□□□ 1.2
GCDH-206ENST00000587832 PARP10Q53GL7 1025 aa22.54■■□□□ 1.2
GCDH-206ENST00000587832 SUSD4Q5VX71 490 aa22.54■■□□□ 1.2
GCDH-206ENST00000587832 CHADLQ6NUI6 762 aa22.54■■□□□ 1.2
GCDH-206ENST00000587832 IARSP41252 1262 aaKnown RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms