RNA–Protein interactions for RNA: ENST00000587147.1

VAT1-204, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-204ENST00000587147 NUP98P52948 1817 aa21.83■■□□□ 1.09
VAT1-204ENST00000587147 DCAF8L1A6NGE4 600 aa21.83■■□□□ 1.09
VAT1-204ENST00000587147 CCDC30Q5VVM6 783 aa21.83■■□□□ 1.09
VAT1-204ENST00000587147 C8orf58Q8NAV2 365 aa21.83■■□□□ 1.09
VAT1-204ENST00000587147 TSR2Q969E8 191 aaKnown RBP21.83■■□□□ 1.09
VAT1-204ENST00000587147 SETDB2Q96T68 719 aa21.83■■□□□ 1.09
VAT1-204ENST00000587147 SALL2Q9Y467 1007 aaPredicted RBP21.83■■□□□ 1.09
VAT1-204ENST00000587147 TBC1D9BQ66K14 1250 aa21.82■■□□□ 1.08
VAT1-204ENST00000587147 CHPF2Q9P2E5 772 aa21.82■■□□□ 1.08
VAT1-204ENST00000587147 CACNA1FO60840 1977 aa21.81■■□□□ 1.08
VAT1-204ENST00000587147 SERPINB2P05120 415 aa21.81■■□□□ 1.08
VAT1-204ENST00000587147 KLHL34Q8N239 644 aa21.81■■□□□ 1.08
VAT1-204ENST00000587147 IBTKQ9P2D0 1353 aaPredicted RBP21.81■■□□□ 1.08
VAT1-204ENST00000587147 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
VAT1-204ENST00000587147 E9PSI1 815 aa21.8■■□□□ 1.08
VAT1-204ENST00000587147 PROSER3Q2NL68 480 aa21.8■■□□□ 1.08
VAT1-204ENST00000587147 TWISTNBQ3B726 338 aaPredicted RBP21.8■■□□□ 1.08
VAT1-204ENST00000587147 GIGYF2Q6Y7W6 1299 aaKnown RBP21.8■■□□□ 1.08
VAT1-204ENST00000587147 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
VAT1-204ENST00000587147 SENP3-EIF4A1A0A087X0R7 540 aa21.79■■□□□ 1.08
VAT1-204ENST00000587147 HSP90AB3PQ58FF7 597 aa21.79■■□□□ 1.08
VAT1-204ENST00000587147 TTLL7Q6ZT98 887 aa21.79■■□□□ 1.08
VAT1-204ENST00000587147 PXDNLA1KZ92 1463 aa21.78■■□□□ 1.08
VAT1-204ENST00000587147 COPS6Q7L5N1 327 aa21.78■■□□□ 1.08
VAT1-204ENST00000587147 NLGN2Q8NFZ4 835 aa21.78■■□□□ 1.08
VAT1-204ENST00000587147 NECTIN2Q92692 538 aa21.78■■□□□ 1.08
VAT1-204ENST00000587147 ANKRD36CQ5JPF3 1778 aa21.78■■□□□ 1.08
VAT1-204ENST00000587147 ELL2O00472 640 aaPredicted RBP21.77■■□□□ 1.08
VAT1-204ENST00000587147 TSPYL6Q8N831 410 aa21.77■■□□□ 1.08
VAT1-204ENST00000587147 XAGE3Q8WTP9 111 aa21.77■■□□□ 1.08
VAT1-204ENST00000587147 SPINK5Q9NQ38 1064 aaPredicted RBP21.77■■□□□ 1.08
VAT1-204ENST00000587147 NIP7Q9Y221 180 aaKnown RBP eCLIP21.77■■□□□ 1.08
VAT1-204ENST00000587147 HLFQ16534 295 aa21.76■■□□□ 1.07
VAT1-204ENST00000587147 BICDL1Q6ZP65 573 aa21.76■■□□□ 1.07
VAT1-204ENST00000587147 STK31Q9BXU1 1019 aa21.76■■□□□ 1.07
VAT1-204ENST00000587147 NYXQ9GZU5 481 aa21.76■■□□□ 1.07
VAT1-204ENST00000587147 ANXA1P04083 346 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 PARP10Q53GL7 1025 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 TPTE2Q6XPS3 522 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 ZNF34Q8IZ26 560 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 CNBD1Q8NA66 436 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 PLBD2Q8NHP8 589 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 BRIP1Q9BX63 1249 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 ZBTB3Q9H5J0 574 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 RNF123Q5XPI4 1314 aa21.75■■□□□ 1.07
VAT1-204ENST00000587147 BRCA1P38398 1863 aaKnown RBP21.75■■□□□ 1.07
VAT1-204ENST00000587147 DLEC1Q9Y238 1755 aa21.74■■□□□ 1.07
VAT1-204ENST00000587147 VAMP4O75379 141 aa21.74■■□□□ 1.07
VAT1-204ENST00000587147 ST5P78524 1137 aa21.74■■□□□ 1.07
VAT1-204ENST00000587147 EXOSC9Q06265 439 aaKnown RBP21.74■■□□□ 1.07
VAT1-204ENST00000587147 PRR5LQ6MZQ0 368 aa21.74■■□□□ 1.07
VAT1-204ENST00000587147 ANKRD13DQ6ZTN6 518 aa21.74■■□□□ 1.07
VAT1-204ENST00000587147 NBPF5PQ86XG9 351 aaPredicted RBP21.74■■□□□ 1.07
VAT1-204ENST00000587147 RIC1Q4ADV7 1423 aa21.73■■□□□ 1.07
VAT1-204ENST00000587147 PDE6BP35913 854 aa21.73■■□□□ 1.07
VAT1-204ENST00000587147 SLFN5Q08AF3 891 aa21.73■■□□□ 1.07
VAT1-204ENST00000587147 N4BP2Q86UW6 1770 aaPredicted RBP21.72■■□□□ 1.07
VAT1-204ENST00000587147 DDX58O95786 925 aaKnown RBP21.72■■□□□ 1.07
VAT1-204ENST00000587147 AIMP1Q12904 312 aaKnown RBP21.72■■□□□ 1.07
VAT1-204ENST00000587147 ZNF428Q96B54 188 aa21.72■■□□□ 1.07
VAT1-204ENST00000587147 ANKRD31Q8N7Z5 1873 aa21.72■■□□□ 1.07
VAT1-204ENST00000587147 ARFGEF2Q9Y6D5 1785 aa21.71■■□□□ 1.07
VAT1-204ENST00000587147 GRIN3BO60391 1043 aa21.71■■□□□ 1.07
VAT1-204ENST00000587147 TCIRG1Q13488 830 aa21.71■■□□□ 1.07
VAT1-204ENST00000587147 TRMT2AQ8IZ69 625 aaKnown RBP21.71■■□□□ 1.07
VAT1-204ENST00000587147 NPHP1O15259 732 aa21.7■■□□□ 1.06
VAT1-204ENST00000587147 PPP1R42Q7Z4L9 355 aa21.7■■□□□ 1.06
VAT1-204ENST00000587147 CT47B1P0C2W7 299 aaPredicted RBP21.69■■□□□ 1.06
VAT1-204ENST00000587147 DPEP1P16444 411 aa21.69■■□□□ 1.06
VAT1-204ENST00000587147 TRIM28Q13263 835 aaKnown RBP21.69■■□□□ 1.06
VAT1-204ENST00000587147 GPR162Q16538 588 aa21.69■■□□□ 1.06
VAT1-204ENST00000587147 UBN2Q6ZU65 1347 aa21.69■■□□□ 1.06
VAT1-204ENST00000587147 KLRG2A4D1S0 409 aaPredicted RBP21.68■■□□□ 1.06
VAT1-204ENST00000587147 H0YIN7 160 aa21.68■■□□□ 1.06
VAT1-204ENST00000587147 KCNA3P22001 575 aa21.68■■□□□ 1.06
VAT1-204ENST00000587147 PIM2Q9P1W9 311 aa21.68■■□□□ 1.06
VAT1-204ENST00000587147 ARFGEF1Q9Y6D6 1849 aa21.68■■□□□ 1.06
VAT1-204ENST00000587147 A0A0G2JLW4 131 aa21.67■■□□□ 1.06
VAT1-204ENST00000587147 SLC4A2P04920 1241 aa21.67■■□□□ 1.06
VAT1-204ENST00000587147 PHAXQ9H814 394 aaKnown RBP21.67■■□□□ 1.06
VAT1-204ENST00000587147 RIC3Q7Z5B4 369 aa21.66■■□□□ 1.06
VAT1-204ENST00000587147 ISCA1Q9BUE6 129 aa21.66■■□□□ 1.06
VAT1-204ENST00000587147 NTSR2O95665 410 aa21.65■■□□□ 1.06
VAT1-204ENST00000587147 GPTP24298 496 aa21.65■■□□□ 1.06
VAT1-204ENST00000587147 GTF2E1P29083 439 aaPredicted RBP21.65■■□□□ 1.06
VAT1-204ENST00000587147 KSR2Q6VAB6 950 aa21.65■■□□□ 1.06
VAT1-204ENST00000587147 NLRP10Q86W26 655 aa21.65■■□□□ 1.06
VAT1-204ENST00000587147 UTP14AQ9BVJ6 771 aaKnown RBP21.65■■□□□ 1.06
VAT1-204ENST00000587147 GOLGB1Q14789 3259 aaKnown RBP21.64■■□□□ 1.06
VAT1-204ENST00000587147 HNRNPUQ00839 825 aaKnown RBP eCLIP21.64■■□□□ 1.05
VAT1-204ENST00000587147 SUSD4Q5VX71 490 aa21.64■■□□□ 1.05
VAT1-204ENST00000587147 C2CD5Q86YS7 1000 aa21.64■■□□□ 1.05
VAT1-204ENST00000587147 COL11A2P13942 1736 aaPredicted RBP21.63■■□□□ 1.05
VAT1-204ENST00000587147 CHD4Q14839 1912 aa21.63■■□□□ 1.05
VAT1-204ENST00000587147 YBX3P16989 372 aaKnown RBP eCLIP21.63■■□□□ 1.05
VAT1-204ENST00000587147 FLIIQ13045 1269 aa21.63■■□□□ 1.05
VAT1-204ENST00000587147 DALRD3Q5D0E6 543 aaKnown RBP21.63■■□□□ 1.05
VAT1-204ENST00000587147 SLC10A5Q5PT55 438 aa21.63■■□□□ 1.05
VAT1-204ENST00000587147 STYK1Q6J9G0 422 aa21.63■■□□□ 1.05
VAT1-204ENST00000587147 METTL22Q9BUU2 404 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms