RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 ADCY9O60503 1353 aa25.64■■□□□ 1.69
ATG4D-204ENST00000586417 HYPKQ9NX55 129 aa25.64■■□□□ 1.69
ATG4D-204ENST00000586417 PDE4AP27815 886 aa25.63■■□□□ 1.69
ATG4D-204ENST00000586417 EN1Q05925 392 aaPredicted RBP25.63■■□□□ 1.69
ATG4D-204ENST00000586417 ANKRD44Q8N8A2 993 aa25.62■■□□□ 1.69
ATG4D-204ENST00000586417 ERBB4Q15303 1308 aa25.62■■□□□ 1.69
ATG4D-204ENST00000586417 PI4KAP2A4QPH2 592 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 SLC27A3Q5K4L6 730 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 CEP85Q6P2H3 762 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 ILDR2Q71H61 639 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 PI4KAP1Q8N8J0 262 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 CCDC87Q9NVE4 849 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 RREB1Q92766 1687 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 DEFB132Q7Z7B7 95 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 DNAAF4Q8WXU2 420 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 BACH2Q9BYV9 841 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 RGPD3A6NKT7 1758 aaPredicted RBP25.61■■□□□ 1.69
ATG4D-204ENST00000586417 RGPD4Q7Z3J3 1758 aa25.61■■□□□ 1.69
ATG4D-204ENST00000586417 AIMP1Q12904 312 aaKnown RBP25.6■■□□□ 1.69
ATG4D-204ENST00000586417 EZH2Q15910 746 aaKnown RBP25.6■■□□□ 1.69
ATG4D-204ENST00000586417 RPAP2Q8IXW5 612 aaPredicted RBP25.6■■□□□ 1.69
ATG4D-204ENST00000586417 CAMKK2Q96RR4 588 aa25.6■■□□□ 1.69
ATG4D-204ENST00000586417 C4BP0C0L5 1744 aa25.6■■□□□ 1.69
ATG4D-204ENST00000586417 SF3B2Q13435 895 aaKnown RBP25.59■■□□□ 1.69
ATG4D-204ENST00000586417 GCC1Q96CN9 775 aa25.59■■□□□ 1.69
ATG4D-204ENST00000586417 ZNF330Q9Y3S2 320 aaPredicted RBP25.59■■□□□ 1.69
ATG4D-204ENST00000586417 NUCB1Q02818 461 aa25.59■■□□□ 1.69
ATG4D-204ENST00000586417 BEND3Q5T5X7 828 aa25.59■■□□□ 1.69
ATG4D-204ENST00000586417 SMIM5Q71RC9 77 aa25.59■■□□□ 1.69
ATG4D-204ENST00000586417 COPS6Q7L5N1 327 aa25.59■■□□□ 1.69
ATG4D-204ENST00000586417 XAGE3Q8WTP9 111 aa25.59■■□□□ 1.69
ATG4D-204ENST00000586417 CNTNAP4Q9C0A0 1308 aa25.57■■□□□ 1.68
ATG4D-204ENST00000586417 GNAI3P08754 354 aa25.57■■□□□ 1.68
ATG4D-204ENST00000586417 SRCIN1Q9C0H9 1055 aa25.57■■□□□ 1.68
ATG4D-204ENST00000586417 USP44Q9H0E7 712 aa25.57■■□□□ 1.68
ATG4D-204ENST00000586417 KSR2Q6VAB6 950 aa25.56■■□□□ 1.68
ATG4D-204ENST00000586417 AMIGO3Q86WK7 504 aa25.56■■□□□ 1.68
ATG4D-204ENST00000586417 GNAI2P04899 355 aa25.56■■□□□ 1.68
ATG4D-204ENST00000586417 TTLL7Q6ZT98 887 aa25.56■■□□□ 1.68
ATG4D-204ENST00000586417 BAG6P46379 1132 aa25.55■■□□□ 1.68
ATG4D-204ENST00000586417 RC3H1Q5TC82 1133 aaKnown RBP25.55■■□□□ 1.68
ATG4D-204ENST00000586417 MAP3K2Q9Y2U5 619 aa25.55■■□□□ 1.68
ATG4D-204ENST00000586417 IL6STP40189 918 aaPredicted RBP25.54■■□□□ 1.68
ATG4D-204ENST00000586417 EIF5P55010 431 aaKnown RBP25.54■■□□□ 1.68
ATG4D-204ENST00000586417 DCTPP1Q9H773 170 aa25.54■■□□□ 1.68
ATG4D-204ENST00000586417 GNPATO15228 680 aa25.54■■□□□ 1.68
ATG4D-204ENST00000586417 C8orf34Q49A92 452 aa25.54■■□□□ 1.68
ATG4D-204ENST00000586417 CCDC125Q86Z20 511 aa25.54■■□□□ 1.68
ATG4D-204ENST00000586417 UPF1Q92900 1129 aaKnown RBP eCLIP25.54■■□□□ 1.683e-7■□□□□ 9.9
ATG4D-204ENST00000586417 FAM161AQ3B820 660 aa25.53■■□□□ 1.68
ATG4D-204ENST00000586417 CHD1LQ86WJ1 897 aa25.53■■□□□ 1.68
ATG4D-204ENST00000586417 DDX58O95786 925 aaKnown RBP25.51■■□□□ 1.67
ATG4D-204ENST00000586417 RPS6KA4O75676 772 aa25.51■■□□□ 1.67
ATG4D-204ENST00000586417 AK7Q96M32 723 aa25.51■■□□□ 1.67
ATG4D-204ENST00000586417 ARXQ96QS3 562 aa25.51■■□□□ 1.67
ATG4D-204ENST00000586417 UBR3Q6ZT12 1888 aa25.51■■□□□ 1.67
ATG4D-204ENST00000586417 ZNF827Q17R98 1081 aa25.5■■□□□ 1.67
ATG4D-204ENST00000586417 ANKRD13DQ6ZTN6 518 aa25.5■■□□□ 1.67
ATG4D-204ENST00000586417 LNPKQ9C0E8 428 aa25.5■■□□□ 1.67
ATG4D-204ENST00000586417 TBC1D2BQ9UPU7 963 aa25.5■■□□□ 1.67
ATG4D-204ENST00000586417 ALDH1L1O75891 902 aa25.49■■□□□ 1.67
ATG4D-204ENST00000586417 UBTFL1P0CB47 393 aaPredicted RBP25.49■■□□□ 1.67
ATG4D-204ENST00000586417 ANKRD45Q5TZF3 282 aa25.49■■□□□ 1.67
ATG4D-204ENST00000586417 LRRFIP2Q9Y608 721 aaKnown RBP25.49■■□□□ 1.67
ATG4D-204ENST00000586417 ZBTB3Q9H5J0 574 aa25.49■■□□□ 1.67
ATG4D-204ENST00000586417 COL15A1P39059 1388 aa25.48■■□□□ 1.67
ATG4D-204ENST00000586417 NUP188Q5SRE5 1749 aa25.48■■□□□ 1.67
ATG4D-204ENST00000586417 ARFGEF2Q9Y6D5 1785 aa25.48■■□□□ 1.67
ATG4D-204ENST00000586417 RTCBQ9Y3I0 505 aaKnown RBP25.48■■□□□ 1.67
ATG4D-204ENST00000586417 HMMRO75330 724 aa25.47■■□□□ 1.67
ATG4D-204ENST00000586417 PHF14O94880 888 aa25.47■■□□□ 1.67
ATG4D-204ENST00000586417 RIC3Q7Z5B4 369 aa25.47■■□□□ 1.67
ATG4D-204ENST00000586417 DZIP3Q86Y13 1208 aaKnown RBP25.47■■□□□ 1.67
ATG4D-204ENST00000586417 AKT1S1Q96B36 256 aa25.47■■□□□ 1.67
ATG4D-204ENST00000586417 NBPF7P0C2Y1 421 aaPredicted RBP25.46■■□□□ 1.67
ATG4D-204ENST00000586417 LINS1Q8NG48 757 aa25.46■■□□□ 1.67
ATG4D-204ENST00000586417 PLBD2Q8NHP8 589 aa25.46■■□□□ 1.67
ATG4D-204ENST00000586417 IBTKQ9P2D0 1353 aaPredicted RBP25.46■■□□□ 1.67
ATG4D-204ENST00000586417 TUBGCP6Q96RT7 1819 aa25.46■■□□□ 1.67
ATG4D-204ENST00000586417 ATP8B2P98198 1209 aa25.46■■□□□ 1.67
ATG4D-204ENST00000586417 NPM2Q86SE8 214 aaKnown RBP25.46■■□□□ 1.67
ATG4D-204ENST00000586417 ANO8Q9HCE9 1232 aaPredicted RBP25.46■■□□□ 1.67
ATG4D-204ENST00000586417 CWF19L2Q2TBE0 894 aaKnown RBP25.44■■□□□ 1.66
ATG4D-204ENST00000586417 ARHGEF1Q92888 912 aaKnown RBP25.44■■□□□ 1.66
ATG4D-204ENST00000586417 C4AP0C0L4 1744 aa25.44■■□□□ 1.66
ATG4D-204ENST00000586417 MAP3K15Q6ZN16 1313 aa25.44■■□□□ 1.66
ATG4D-204ENST00000586417 PNMA6EA0A0J9YXQ4 647 aa25.44■■□□□ 1.66
ATG4D-204ENST00000586417 HLFQ16534 295 aa25.44■■□□□ 1.66
ATG4D-204ENST00000586417 KIF6Q6ZMV9 814 aa25.44■■□□□ 1.66
ATG4D-204ENST00000586417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.43■■□□□ 1.66
ATG4D-204ENST00000586417 IGKV5-2P06315 115 aa25.43■■□□□ 1.66
ATG4D-204ENST00000586417 METTL22Q9BUU2 404 aaPredicted RBP25.43■■□□□ 1.66
ATG4D-204ENST00000586417 NUP98P52948 1817 aa25.42■■□□□ 1.66
ATG4D-204ENST00000586417 CAMTA2O94983 1202 aa25.42■■□□□ 1.66
ATG4D-204ENST00000586417 TFCP2L1Q9NZI6 479 aa25.42■■□□□ 1.66
ATG4D-204ENST00000586417 UTYO14607 1347 aa25.42■■□□□ 1.66
ATG4D-204ENST00000586417 TRAPPC3LQ5T215 181 aa25.41■■□□□ 1.66
ATG4D-204ENST00000586417 SRP68Q9UHB9 627 aaKnown RBP25.41■■□□□ 1.66
ATG4D-204ENST00000586417 MYD88Q99836 296 aa25.4■■□□□ 1.66
ATG4D-204ENST00000586417 A0A087WZG4 1122 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms