RNA–Protein interactions for RNA: ENST00000585942.5

CACTIN-204, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 1 (best)

Gene CACTIN, Length 2,810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-204ENST00000585942 TSPY26PQ9H489 355 aa22.21■■□□□ 1.15
CACTIN-204ENST00000585942 CASTP20810 708 aaKnown RBP22.21■■□□□ 1.15
CACTIN-204ENST00000585942 MAP3K2Q9Y2U5 619 aa22.21■■□□□ 1.15
CACTIN-204ENST00000585942 ADCK5Q3MIX3 580 aa22.21■■□□□ 1.15
CACTIN-204ENST00000585942 MPNDQ8N594 471 aa22.21■■□□□ 1.15
CACTIN-204ENST00000585942 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.2■■□□□ 1.14
CACTIN-204ENST00000585942 SYT1P21579 422 aa22.2■■□□□ 1.14
CACTIN-204ENST00000585942 C9orf78Q9NZ63 289 aaPredicted RBP22.2■■□□□ 1.14
CACTIN-204ENST00000585942 N4BP2Q86UW6 1770 aaPredicted RBP22.19■■□□□ 1.14
CACTIN-204ENST00000585942 PSME1Q06323 249 aa22.19■■□□□ 1.14
CACTIN-204ENST00000585942 ESCO1Q5FWF5 840 aa22.19■■□□□ 1.14
CACTIN-204ENST00000585942 MTERF4Q7Z6M4 381 aaKnown RBP22.19■■□□□ 1.14
CACTIN-204ENST00000585942 EPB41L2O43491 1005 aaKnown RBP22.19■■□□□ 1.14
CACTIN-204ENST00000585942 DIAPH3Q9NSV4 1193 aa22.19■■□□□ 1.14
CACTIN-204ENST00000585942 LIMCH1Q9UPQ0 1083 aa22.19■■□□□ 1.14
CACTIN-204ENST00000585942 CLASRPQ8N2M8 674 aaKnown RBP22.18■■□□□ 1.14
CACTIN-204ENST00000585942 ZKSCAN5Q9Y2L8 839 aa22.18■■□□□ 1.14
CACTIN-204ENST00000585942 LTN1O94822 1766 aa22.18■■□□□ 1.14
CACTIN-204ENST00000585942 ZNF500O60304 480 aaPredicted RBP22.18■■□□□ 1.14
CACTIN-204ENST00000585942 GLRX3O76003 335 aaKnown RBP22.17■■□□□ 1.14
CACTIN-204ENST00000585942 ZSCAN22P10073 491 aaPredicted RBP22.17■■□□□ 1.14
CACTIN-204ENST00000585942 PRPF40BQ6NWY9 871 aaKnown RBP22.17■■□□□ 1.14
CACTIN-204ENST00000585942 DYNC1I1O14576 645 aa22.17■■□□□ 1.14
CACTIN-204ENST00000585942 STX6O43752 255 aa22.17■■□□□ 1.14
CACTIN-204ENST00000585942 HOXB7P09629 217 aa22.17■■□□□ 1.14
CACTIN-204ENST00000585942 AKAP4Q5JQC9 854 aa22.17■■□□□ 1.14
CACTIN-204ENST00000585942 SYAP1Q96A49 352 aaPredicted RBP22.17■■□□□ 1.14
CACTIN-204ENST00000585942 DBF4Q9UBU7 674 aaPredicted RBP22.17■■□□□ 1.14
CACTIN-204ENST00000585942 COL9A3Q14050 684 aaPredicted RBP22.16■■□□□ 1.14
CACTIN-204ENST00000585942 HSP90AB4PQ58FF6 505 aa22.16■■□□□ 1.14
CACTIN-204ENST00000585942 CCDC83Q8IWF9 413 aa22.16■■□□□ 1.14
CACTIN-204ENST00000585942 JAKMIP1Q96N16 626 aaKnown RBP22.16■■□□□ 1.14
CACTIN-204ENST00000585942 HYPKQ9NX55 129 aa22.16■■□□□ 1.14
CACTIN-204ENST00000585942 SMC3Q9UQE7 1217 aa22.16■■□□□ 1.14
CACTIN-204ENST00000585942 RGPD2P0DJD1 1756 aa22.15■■□□□ 1.14
CACTIN-204ENST00000585942 ECHDC1Q9NTX5 307 aa22.15■■□□□ 1.14
CACTIN-204ENST00000585942 FIBPO43427 364 aa22.15■■□□□ 1.14
CACTIN-204ENST00000585942 GIGYF1O75420 1035 aaPredicted RBP22.15■■□□□ 1.14
CACTIN-204ENST00000585942 AIMP1Q12904 312 aaKnown RBP22.15■■□□□ 1.14
CACTIN-204ENST00000585942 TTC41PQ6P2S7 1318 aa22.14■■□□□ 1.14
CACTIN-204ENST00000585942 RNMTO43148 476 aaKnown RBP22.14■■□□□ 1.14
CACTIN-204ENST00000585942 IFIT2P09913 472 aaKnown RBP22.14■■□□□ 1.14
CACTIN-204ENST00000585942 PLEKHO1Q53GL0 409 aaPredicted RBP22.14■■□□□ 1.14
CACTIN-204ENST00000585942 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.14
CACTIN-204ENST00000585942 AACSQ86V21 672 aa22.14■■□□□ 1.13
CACTIN-204ENST00000585942 USP42Q9H9J4 1324 aaKnown RBP22.14■■□□□ 1.13
CACTIN-204ENST00000585942 MTX1Q13505 466 aa22.13■■□□□ 1.13
CACTIN-204ENST00000585942 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.13■■□□□ 1.13
CACTIN-204ENST00000585942 FAM227BQ96M60 508 aa22.13■■□□□ 1.13
CACTIN-204ENST00000585942 CCDC39Q9UFE4 941 aa22.13■■□□□ 1.13
CACTIN-204ENST00000585942 GJB2P29033 226 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 DMTNQ08495 405 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 KSR2Q6VAB6 950 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 CCDC8Q9H0W5 538 aaPredicted RBP22.12■■□□□ 1.13
CACTIN-204ENST00000585942 PDRG1Q9NUG6 133 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 MED1Q15648 1581 aaPredicted RBP22.12■■□□□ 1.13
CACTIN-204ENST00000585942 PXDNQ92626 1479 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 F13A1P00488 732 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 C1orf141Q5JVX7 400 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 NECAB1Q8N987 351 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 KAZALD1Q96I82 304 aa22.12■■□□□ 1.13
CACTIN-204ENST00000585942 PTMAP06454 111 aaKnown RBP22.12■■□□□ 1.13
CACTIN-204ENST00000585942 NFAT5O94916 1531 aa22.11■■□□□ 1.13
CACTIN-204ENST00000585942 SUCLG2Q96I99 432 aa22.11■■□□□ 1.13
CACTIN-204ENST00000585942 SIL1Q9H173 461 aa22.11■■□□□ 1.13
CACTIN-204ENST00000585942 SASH1O94885 1247 aa22.11■■□□□ 1.13
CACTIN-204ENST00000585942 TMEM87AQ8NBN3 555 aa22.11■■□□□ 1.13
CACTIN-204ENST00000585942 KLHDC4Q8TBB5 520 aa22.11■■□□□ 1.13
CACTIN-204ENST00000585942 EAF2Q96CJ1 260 aaPredicted RBP22.11■■□□□ 1.13
CACTIN-204ENST00000585942 TLR7Q9NYK1 1049 aaKnown RBP22.11■■□□□ 1.13
CACTIN-204ENST00000585942 PHF14O94880 888 aa22.1■■□□□ 1.13
CACTIN-204ENST00000585942 HCLS1P14317 486 aaPredicted RBP22.1■■□□□ 1.13
CACTIN-204ENST00000585942 DNM1Q05193 864 aaKnown RBP22.1■■□□□ 1.13
CACTIN-204ENST00000585942 ST3GAL1Q11201 340 aa22.1■■□□□ 1.13
CACTIN-204ENST00000585942 RUFY2Q8WXA3 655 aa22.1■■□□□ 1.13
CACTIN-204ENST00000585942 ZNF830Q96NB3 372 aaPredicted RBP22.1■■□□□ 1.13
CACTIN-204ENST00000585942 BICC1Q9H694 974 aaKnown RBP22.1■■□□□ 1.13
CACTIN-204ENST00000585942 USP25Q9UHP3 1055 aa22.1■■□□□ 1.13
CACTIN-204ENST00000585942 KDM3BQ7LBC6 1761 aa22.1■■□□□ 1.13
CACTIN-204ENST00000585942 GCP02774 474 aa22.1■■□□□ 1.13
CACTIN-204ENST00000585942 UTP14CQ5TAP6 766 aaKnown RBP22.1■■□□□ 1.13
CACTIN-204ENST00000585942 ORAI2Q96SN7 254 aa22.1■■□□□ 1.13
CACTIN-204ENST00000585942 ME3Q16798 604 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 KCNH5Q8NCM2 988 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 CCDC94Q9BW85 323 aaPredicted RBP22.09■■□□□ 1.13
CACTIN-204ENST00000585942 AXIN2Q9Y2T1 843 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 NECTIN1Q15223 517 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 CSPP1Q1MSJ5 1256 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 CCDC183Q5T5S1 534 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 TCEANC2Q96MN5 208 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 ZSWIM6Q9HCJ5 1215 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 CYP46A1Q9Y6A2 500 aa22.09■■□□□ 1.13
CACTIN-204ENST00000585942 ALDH1L1O75891 902 aa22.08■■□□□ 1.13
CACTIN-204ENST00000585942 ZSCAN20P17040 1043 aaPredicted RBP22.08■■□□□ 1.13
CACTIN-204ENST00000585942 SASS6Q6UVJ0 657 aa22.08■■□□□ 1.13
CACTIN-204ENST00000585942 UBE2HP62256 183 aa22.08■■□□□ 1.13
CACTIN-204ENST00000585942 VPS53Q5VIR6 699 aa22.08■■□□□ 1.13
CACTIN-204ENST00000585942 MTMR6Q9Y217 621 aa22.08■■□□□ 1.13
CACTIN-204ENST00000585942 RBM8AQ9Y5S9 174 aaKnown RBP22.08■■□□□ 1.13
CACTIN-204ENST00000585942 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms