RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CCDC30Q5VVM6 783 aa17.84■□□□□ 0.45
PRKCSH-202ENST00000585540 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
PRKCSH-202ENST00000585540 SALL2Q9Y467 1007 aaPredicted RBP17.84■□□□□ 0.45
PRKCSH-202ENST00000585540 ZNF521Q96K83 1311 aa17.83■□□□□ 0.44
PRKCSH-202ENST00000585540 GOLGA2Q08379 1002 aa17.83■□□□□ 0.44
PRKCSH-202ENST00000585540 LRP10Q7Z4F1 713 aa17.83■□□□□ 0.44
PRKCSH-202ENST00000585540 PXDNLA1KZ92 1463 aa17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 RNF123Q5XPI4 1314 aa17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 GRIN3BO60391 1043 aa17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 MYL6BP14649 208 aa17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 PIP4K2AP48426 406 aaPredicted RBP17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 TBC1D9BQ66K14 1250 aa17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 GIGYF2Q6Y7W6 1299 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 NUP98P52948 1817 aa17.82■□□□□ 0.44
PRKCSH-202ENST00000585540 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
PRKCSH-202ENST00000585540 FANCIQ9NVI1 1328 aa17.81■□□□□ 0.44
PRKCSH-202ENST00000585540 ST5P78524 1137 aa17.81■□□□□ 0.44
PRKCSH-202ENST00000585540 PARP10Q53GL7 1025 aa17.81■□□□□ 0.44
PRKCSH-202ENST00000585540 NYXQ9GZU5 481 aa17.81■□□□□ 0.44
PRKCSH-202ENST00000585540 KRT24Q2M2I5 525 aa17.8■□□□□ 0.44
PRKCSH-202ENST00000585540 TWISTNBQ3B726 338 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-202ENST00000585540 CNBD1Q8NA66 436 aa17.8■□□□□ 0.44
PRKCSH-202ENST00000585540 NLGN2Q8NFZ4 835 aa17.8■□□□□ 0.44
PRKCSH-202ENST00000585540 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
PRKCSH-202ENST00000585540 NIP7Q9Y221 180 aaKnown RBP eCLIP17.8■□□□□ 0.44
PRKCSH-202ENST00000585540 RIC1Q4ADV7 1423 aa17.8■□□□□ 0.44
PRKCSH-202ENST00000585540 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
PRKCSH-202ENST00000585540 E9PSI1 815 aa17.79■□□□□ 0.44
PRKCSH-202ENST00000585540 NPHP1O15259 732 aa17.79■□□□□ 0.44
PRKCSH-202ENST00000585540 TPTE2Q6XPS3 522 aa17.79■□□□□ 0.44
PRKCSH-202ENST00000585540 STK31Q9BXU1 1019 aa17.79■□□□□ 0.44
PRKCSH-202ENST00000585540 DLEC1Q9Y238 1755 aa17.79■□□□□ 0.44
PRKCSH-202ENST00000585540 BRCA1P38398 1863 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 PDE6BP35913 854 aa17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 BICDL1Q6ZP65 573 aa17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 TTLL7Q6ZT98 887 aa17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 C8orf58Q8NAV2 365 aa17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 PLBD2Q8NHP8 589 aa17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 TSR2Q969E8 191 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 BRIP1Q9BX63 1249 aa17.78■□□□□ 0.44
PRKCSH-202ENST00000585540 DDX58O95786 925 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-202ENST00000585540 GPR162Q16538 588 aa17.77■□□□□ 0.44
PRKCSH-202ENST00000585540 PRR5LQ6MZQ0 368 aa17.77■□□□□ 0.44
PRKCSH-202ENST00000585540 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
PRKCSH-202ENST00000585540 NBPF5PQ86XG9 351 aaPredicted RBP17.77■□□□□ 0.44
PRKCSH-202ENST00000585540 PROSER3Q2NL68 480 aa17.76■□□□□ 0.43
PRKCSH-202ENST00000585540 PPP1R42Q7Z4L9 355 aa17.76■□□□□ 0.43
PRKCSH-202ENST00000585540 XAGE3Q8WTP9 111 aa17.76■□□□□ 0.43
PRKCSH-202ENST00000585540 ZNF428Q96B54 188 aa17.76■□□□□ 0.43
PRKCSH-202ENST00000585540 ZBTB3Q9H5J0 574 aa17.76■□□□□ 0.43
PRKCSH-202ENST00000585540 HLFQ16534 295 aa17.75■□□□□ 0.43
PRKCSH-202ENST00000585540 ANKRD13DQ6ZTN6 518 aa17.75■□□□□ 0.43
PRKCSH-202ENST00000585540 ZNF34Q8IZ26 560 aa17.75■□□□□ 0.43
PRKCSH-202ENST00000585540 NECTIN2Q92692 538 aa17.75■□□□□ 0.43
PRKCSH-202ENST00000585540 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
PRKCSH-202ENST00000585540 N4BP2Q86UW6 1770 aaPredicted RBP17.75■□□□□ 0.43
PRKCSH-202ENST00000585540 ARFGEF1Q9Y6D6 1849 aa17.75■□□□□ 0.43
PRKCSH-202ENST00000585540 CHD4Q14839 1912 aa17.74■□□□□ 0.43
PRKCSH-202ENST00000585540 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 H0YIN7 160 aa17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 ELL2O00472 640 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 ANXA1P04083 346 aa17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 DPEP1P16444 411 aa17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 GTF2E1P29083 439 aaPredicted RBP17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 TCIRG1Q13488 830 aa17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 TSPYL6Q8N831 410 aa17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
PRKCSH-202ENST00000585540 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-202ENST00000585540 AIMP1Q12904 312 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-202ENST00000585540 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
PRKCSH-202ENST00000585540 KLRG2A4D1S0 409 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-202ENST00000585540 VAMP4O75379 141 aa17.71■□□□□ 0.43
PRKCSH-202ENST00000585540 HSP90B1P14625 803 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-202ENST00000585540 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
PRKCSH-202ENST00000585540 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
PRKCSH-202ENST00000585540 A0A0G2JLW4 131 aa17.7■□□□□ 0.42
PRKCSH-202ENST00000585540 SLFN5Q08AF3 891 aa17.7■□□□□ 0.42
PRKCSH-202ENST00000585540 STYK1Q6J9G0 422 aa17.7■□□□□ 0.42
PRKCSH-202ENST00000585540 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
PRKCSH-202ENST00000585540 C2CD5Q86YS7 1000 aa17.7■□□□□ 0.42
PRKCSH-202ENST00000585540 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-202ENST00000585540 UBN2Q6ZU65 1347 aa17.7■□□□□ 0.42
PRKCSH-202ENST00000585540 NTSR2O95665 410 aa17.69■□□□□ 0.42
PRKCSH-202ENST00000585540 KCNA3P22001 575 aa17.69■□□□□ 0.42
PRKCSH-202ENST00000585540 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
PRKCSH-202ENST00000585540 CNKSR1Q969H4 720 aa17.69■□□□□ 0.42
PRKCSH-202ENST00000585540 MASTLQ96GX5 879 aa17.69■□□□□ 0.42
PRKCSH-202ENST00000585540 ISCA1Q9BUE6 129 aa17.69■□□□□ 0.42
PRKCSH-202ENST00000585540 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
PRKCSH-202ENST00000585540 YBX3P16989 372 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRKCSH-202ENST00000585540 GPTP24298 496 aa17.68■□□□□ 0.42
PRKCSH-202ENST00000585540 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRKCSH-202ENST00000585540 SOGA3Q5TF21 947 aa17.68■□□□□ 0.42
PRKCSH-202ENST00000585540 NLRP10Q86W26 655 aa17.68■□□□□ 0.42
PRKCSH-202ENST00000585540 BCS1LQ9Y276 419 aa17.68■□□□□ 0.42
PRKCSH-202ENST00000585540 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
PRKCSH-202ENST00000585540 SRGNP10124 158 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms