RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 LRP10Q7Z4F1 713 aa21.43■■□□□ 1.02
GCDH-203ENST00000585420 KLHL34Q8N239 644 aa21.43■■□□□ 1.02
GCDH-203ENST00000585420 DDR1Q08345 913 aa21.42■■□□□ 1.02
GCDH-203ENST00000585420 NFIXQ14938 502 aa21.42■■□□□ 1.02
GCDH-203ENST00000585420 TTLL7Q6ZT98 887 aa21.42■■□□□ 1.02
GCDH-203ENST00000585420 CHPF2Q9P2E5 772 aa21.42■■□□□ 1.02
GCDH-203ENST00000585420 VAMP4O75379 141 aa21.41■■□□□ 1.02
GCDH-203ENST00000585420 PARP3Q9Y6F1 533 aa21.41■■□□□ 1.02
GCDH-203ENST00000585420 RARSP54136 660 aaKnown RBP21.41■■□□□ 1.02
GCDH-203ENST00000585420 TBC1D9BQ66K14 1250 aa21.41■■□□□ 1.02
GCDH-203ENST00000585420 BICDL1Q6ZP65 573 aa21.41■■□□□ 1.02
GCDH-203ENST00000585420 SCN7AQ01118 1682 aa21.4■■□□□ 1.02
GCDH-203ENST00000585420 POLRMTO00411 1230 aaKnown RBP21.4■■□□□ 1.02
GCDH-203ENST00000585420 DDX21Q9NR30 783 aaKnown RBP eCLIP21.4■■□□□ 1.02
GCDH-203ENST00000585420 HLFQ16534 295 aa21.39■■□□□ 1.01
GCDH-203ENST00000585420 ZNF428Q96B54 188 aa21.39■■□□□ 1.01
GCDH-203ENST00000585420 BCL2L13Q9BXK5 485 aa21.39■■□□□ 1.01
GCDH-203ENST00000585420 BCAR3O75815 825 aa21.38■■□□□ 1.01
GCDH-203ENST00000585420 NLGN2Q8NFZ4 835 aa21.38■■□□□ 1.01
GCDH-203ENST00000585420 DBF4Q9UBU7 674 aaPredicted RBP21.38■■□□□ 1.01
GCDH-203ENST00000585420 BCORQ6W2J9 1755 aa21.37■■□□□ 1.01
GCDH-203ENST00000585420 AIMP1Q12904 312 aaKnown RBP21.37■■□□□ 1.01
GCDH-203ENST00000585420 CLEC4GQ6UXB4 293 aa21.37■■□□□ 1.01
GCDH-203ENST00000585420 KIF6Q6ZMV9 814 aa21.37■■□□□ 1.01
GCDH-203ENST00000585420 COPS6Q7L5N1 327 aa21.37■■□□□ 1.01
GCDH-203ENST00000585420 ZBTB3Q9H5J0 574 aa21.37■■□□□ 1.01
GCDH-203ENST00000585420 SMC4Q9NTJ3 1288 aa21.37■■□□□ 1.01
GCDH-203ENST00000585420 MAP3K15Q6ZN16 1313 aa21.37■■□□□ 1.01
GCDH-203ENST00000585420 XAGE3Q8WTP9 111 aa21.36■■□□□ 1.01
GCDH-203ENST00000585420 SSH1Q8WYL5 1049 aa21.36■■□□□ 1.01
GCDH-203ENST00000585420 CD2APQ9Y5K6 639 aa21.36■■□□□ 1.01
GCDH-203ENST00000585420 ERVV-1B6SEH8 477 aa21.35■■□□□ 1.01
GCDH-203ENST00000585420 TCERG1O14776 1098 aaKnown RBP21.35■■□□□ 1.01
GCDH-203ENST00000585420 ALDH1L2Q3SY69 923 aa21.35■■□□□ 1.01
GCDH-203ENST00000585420 ZNF652Q9Y2D9 606 aa21.35■■□□□ 1.01
GCDH-203ENST00000585420 SERPINB2P05120 415 aa21.35■■□□□ 1.01
GCDH-203ENST00000585420 RRP1P56182 461 aaKnown RBP21.35■■□□□ 1.01
GCDH-203ENST00000585420 SETDB2Q96T68 719 aa21.35■■□□□ 1.01
GCDH-203ENST00000585420 CCDC30Q5VVM6 783 aa21.34■■□□□ 1.01
GCDH-203ENST00000585420 RGL2O15211 777 aa21.33■■□□□ 1.01
GCDH-203ENST00000585420 HYPKQ9NX55 129 aa21.33■■□□□ 1.01
GCDH-203ENST00000585420 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
GCDH-203ENST00000585420 NIP7Q9Y221 180 aaKnown RBP eCLIP21.32■■□□□ 1
GCDH-203ENST00000585420 RNF123Q5XPI4 1314 aa21.32■■□□□ 1
GCDH-203ENST00000585420 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.32■■□□□ 1
GCDH-203ENST00000585420 FRAT1Q92837 279 aaPredicted RBP21.32■■□□□ 1
GCDH-203ENST00000585420 CARMIL3Q8ND23 1372 aa21.32■■□□□ 1
GCDH-203ENST00000585420 C10orf71Q711Q0 1435 aa21.31■■□□□ 1
GCDH-203ENST00000585420 PLIN1O60240 522 aa21.31■■□□□ 1
GCDH-203ENST00000585420 GIGYF2Q6Y7W6 1299 aaKnown RBP21.31■■□□□ 1
GCDH-203ENST00000585420 STK31Q9BXU1 1019 aa21.3■■□□□ 1
GCDH-203ENST00000585420 CHMP4AQ9BY43 222 aa21.3■■□□□ 1
GCDH-203ENST00000585420 AFDNP55196 1824 aaKnown RBP21.3■■□□□ 1
GCDH-203ENST00000585420 NEFLP07196 543 aa21.29■■□□□ 1
GCDH-203ENST00000585420 CCDC24Q8N4L8 307 aa21.29■■□□□ 1
GCDH-203ENST00000585420 NRXN2Q9P2S2 1712 aa21.29■■□□□ 1
GCDH-203ENST00000585420 MRPL50Q8N5N7 158 aaKnown RBP21.29■■□□□ 1
GCDH-203ENST00000585420 KIF16BQ96L93 1317 aa21.28■■□□□ 1
GCDH-203ENST00000585420 NUP98P52948 1817 aa21.28■■□□□ 1
GCDH-203ENST00000585420 GPTP24298 496 aa21.28■■□□□ 1
GCDH-203ENST00000585420 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
GCDH-203ENST00000585420 ANKRD13DQ6ZTN6 518 aa21.28■■□□□ 1
GCDH-203ENST00000585420 ATP10DQ9P241 1426 aa21.27■■□□□ 1
GCDH-203ENST00000585420 KIF13BQ9NQT8 1826 aa21.27■■□□□ 1
GCDH-203ENST00000585420 FAM177BA6PVY3 158 aa21.27■■□□□ 1
GCDH-203ENST00000585420 SLC4A2P04920 1241 aa21.27■■□□□ 1
GCDH-203ENST00000585420 ZNF34Q8IZ26 560 aa21.27■■□□□ 1
GCDH-203ENST00000585420 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
GCDH-203ENST00000585420 UBN2Q6ZU65 1347 aa21.27■□□□□ 0.99
GCDH-203ENST00000585420 A0A0G2JLW4 131 aa21.26■□□□□ 0.99
GCDH-203ENST00000585420 TGFB2P61812 414 aa21.26■□□□□ 0.99
GCDH-203ENST00000585420 IRX6P78412 446 aaPredicted RBP21.26■□□□□ 0.99
GCDH-203ENST00000585420 NBPF5PQ86XG9 351 aaPredicted RBP21.26■□□□□ 0.99
GCDH-203ENST00000585420 NOB1Q9ULX3 412 aaKnown RBP21.26■□□□□ 0.99
GCDH-203ENST00000585420 BRPF1P55201 1214 aaPredicted RBP21.26■□□□□ 0.99
GCDH-203ENST00000585420 CNBD1Q8NA66 436 aa21.26■□□□□ 0.99
GCDH-203ENST00000585420 WWC3Q9ULE0 1092 aa21.26■□□□□ 0.99
GCDH-203ENST00000585420 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
GCDH-203ENST00000585420 NPHP1O15259 732 aa21.25■□□□□ 0.99
GCDH-203ENST00000585420 G2E3Q7L622 706 aa21.25■□□□□ 0.99
GCDH-203ENST00000585420 DPEP1P16444 411 aa21.24■□□□□ 0.99
GCDH-203ENST00000585420 ZKSCAN2Q63HK3 967 aa21.24■□□□□ 0.99
GCDH-203ENST00000585420 IPO8O15397 1037 aaKnown RBP21.24■□□□□ 0.99
GCDH-203ENST00000585420 TCIRG1Q13488 830 aa21.24■□□□□ 0.99
GCDH-203ENST00000585420 SUSD4Q5VX71 490 aa21.24■□□□□ 0.99
GCDH-203ENST00000585420 TPTE2Q6XPS3 522 aa21.24■□□□□ 0.99
GCDH-203ENST00000585420 KIAA1551Q9HCM1 1747 aa21.23■□□□□ 0.99
GCDH-203ENST00000585420 KCNA3P22001 575 aa21.23■□□□□ 0.99
GCDH-203ENST00000585420 CHRNA5P30532 468 aa21.23■□□□□ 0.99
GCDH-203ENST00000585420 HSP90AB3PQ58FF7 597 aa21.23■□□□□ 0.99
GCDH-203ENST00000585420 RIC3Q7Z5B4 369 aa21.23■□□□□ 0.99
GCDH-203ENST00000585420 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
GCDH-203ENST00000585420 ST5P78524 1137 aa21.22■□□□□ 0.99
GCDH-203ENST00000585420 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
GCDH-203ENST00000585420 NUTM1Q86Y26 1132 aa21.21■□□□□ 0.99
GCDH-203ENST00000585420 BRIP1Q9BX63 1249 aa21.21■□□□□ 0.99
GCDH-203ENST00000585420 ATP5J2-PTCD1G3V325 749 aa21.21■□□□□ 0.99
GCDH-203ENST00000585420 GPR162Q16538 588 aa21.21■□□□□ 0.99
GCDH-203ENST00000585420 PARP10Q53GL7 1025 aa21.21■□□□□ 0.99
GCDH-203ENST00000585420 C20orf194Q5TEA3 1177 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms