RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 PIP4K2AP48426 406 aaPredicted RBP21.73■■□□□ 1.07
LSM12-202ENST00000585388 TAF7Q15545 349 aaPredicted RBP21.73■■□□□ 1.07
LSM12-202ENST00000585388 DICER1Q9UPY3 1922 aaKnown RBP21.72■■□□□ 1.07
LSM12-202ENST00000585388 CCDC24Q8N4L8 307 aa21.72■■□□□ 1.07
LSM12-202ENST00000585388 RRAGCQ9HB90 399 aa21.72■■□□□ 1.07
LSM12-202ENST00000585388 PNISRQ8TF01 805 aaKnown RBP21.71■■□□□ 1.07
LSM12-202ENST00000585388 CNKSR1Q969H4 720 aa21.71■■□□□ 1.07
LSM12-202ENST00000585388 GLTPD2A6NH11 291 aa21.7■■□□□ 1.06
LSM12-202ENST00000585388 C21orf2O43822 256 aa21.7■■□□□ 1.06
LSM12-202ENST00000585388 PRELPP51888 382 aa21.7■■□□□ 1.06
LSM12-202ENST00000585388 STYK1Q6J9G0 422 aa21.7■■□□□ 1.06
LSM12-202ENST00000585388 NBPF5PQ86XG9 351 aaPredicted RBP21.7■■□□□ 1.06
LSM12-202ENST00000585388 SLX4Q8IY92 1834 aa21.69■■□□□ 1.06
LSM12-202ENST00000585388 SOGA3Q5TF21 947 aa21.69■■□□□ 1.06
LSM12-202ENST00000585388 PNNQ9H307 717 aaKnown RBP21.69■■□□□ 1.06
LSM12-202ENST00000585388 LTBP3Q9NS15 1303 aa21.69■■□□□ 1.06
LSM12-202ENST00000585388 NBPF26B4DH59 902 aa21.68■■□□□ 1.06
LSM12-202ENST00000585388 SRGNP10124 158 aa21.68■■□□□ 1.06
LSM12-202ENST00000585388 NBPF10Q6P3W6 841 aaKnown RBP21.68■■□□□ 1.06
LSM12-202ENST00000585388 NBPF15Q8N660 670 aa21.68■■□□□ 1.06
LSM12-202ENST00000585388 MASTLQ96GX5 879 aa21.68■■□□□ 1.06
LSM12-202ENST00000585388 ZNF219Q9P2Y4 722 aaPredicted RBP21.68■■□□□ 1.06
LSM12-202ENST00000585388 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
LSM12-202ENST00000585388 VEGFAP15692 232 aaPredicted RBP21.67■■□□□ 1.06
LSM12-202ENST00000585388 NFE2L2Q16236 605 aa21.67■■□□□ 1.06
LSM12-202ENST00000585388 PRPF40BQ6NWY9 871 aaKnown RBP21.67■■□□□ 1.06
LSM12-202ENST00000585388 SMC1BQ8NDV3 1235 aa21.67■■□□□ 1.06
LSM12-202ENST00000585388 PLEKHF1Q96S99 279 aa21.67■■□□□ 1.06
LSM12-202ENST00000585388 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
LSM12-202ENST00000585388 NIP7Q9Y221 180 aaKnown RBP eCLIP21.66■■□□□ 1.06
LSM12-202ENST00000585388 DPY19L2Q6NUT2 758 aa21.65■■□□□ 1.06
LSM12-202ENST00000585388 TPTE2Q6XPS3 522 aa21.65■■□□□ 1.06
LSM12-202ENST00000585388 MIS18AQ9NYP9 233 aa21.65■■□□□ 1.06
LSM12-202ENST00000585388 ERFEQ4G0M1 354 aa21.64■■□□□ 1.05
LSM12-202ENST00000585388 NPR1P16066 1061 aa21.63■■□□□ 1.05
LSM12-202ENST00000585388 DNAJC5GQ8N7S2 189 aa21.63■■□□□ 1.05
LSM12-202ENST00000585388 NUP98P52948 1817 aa21.62■■□□□ 1.05
LSM12-202ENST00000585388 EIF4A1P60842 406 aaKnown RBP21.61■■□□□ 1.05
LSM12-202ENST00000585388 KLRG2A4D1S0 409 aaPredicted RBP21.6■■□□□ 1.05
LSM12-202ENST00000585388 RALBP1Q15311 655 aa21.6■■□□□ 1.05
LSM12-202ENST00000585388 CCDC93Q567U6 631 aa21.6■■□□□ 1.05
LSM12-202ENST00000585388 IFFO2Q5TF58 517 aa21.6■■□□□ 1.05
LSM12-202ENST00000585388 KIF6Q6ZMV9 814 aa21.6■■□□□ 1.05
LSM12-202ENST00000585388 ERVV-1B6SEH8 477 aa21.59■■□□□ 1.05
LSM12-202ENST00000585388 GTF2E1P29083 439 aaPredicted RBP21.59■■□□□ 1.05
LSM12-202ENST00000585388 HLFQ16534 295 aa21.59■■□□□ 1.05
LSM12-202ENST00000585388 THUMPD2Q9BTF0 503 aaKnown RBP21.59■■□□□ 1.05
LSM12-202ENST00000585388 NYXQ9GZU5 481 aa21.59■■□□□ 1.05
LSM12-202ENST00000585388 ERBB4Q15303 1308 aa21.58■■□□□ 1.05
LSM12-202ENST00000585388 MAP3K15Q6ZN16 1313 aa21.58■■□□□ 1.05
LSM12-202ENST00000585388 FAM177BA6PVY3 158 aa21.58■■□□□ 1.05
LSM12-202ENST00000585388 KLRG1Q96E93 195 aa21.58■■□□□ 1.05
LSM12-202ENST00000585388 IBTKQ9P2D0 1353 aaPredicted RBP21.58■■□□□ 1.04
LSM12-202ENST00000585388 NGEFQ8N5V2 710 aa21.57■■□□□ 1.04
LSM12-202ENST00000585388 C7orf43Q8WVR3 580 aa21.57■■□□□ 1.04
LSM12-202ENST00000585388 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
LSM12-202ENST00000585388 RIC1Q4ADV7 1423 aa21.56■■□□□ 1.04
LSM12-202ENST00000585388 HTRA3P83110 453 aa21.56■■□□□ 1.04
LSM12-202ENST00000585388 POTECB2RU33 542 aa21.55■■□□□ 1.04
LSM12-202ENST00000585388 MYL6BP14649 208 aa21.55■■□□□ 1.04
LSM12-202ENST00000585388 ALDH1B1P30837 517 aa21.55■■□□□ 1.04
LSM12-202ENST00000585388 FKBP4Q02790 459 aaKnown RBP eCLIP21.55■■□□□ 1.04
LSM12-202ENST00000585388 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
LSM12-202ENST00000585388 TSPYL4Q9UJ04 414 aa21.55■■□□□ 1.04
LSM12-202ENST00000585388 ABCC12Q96J65 1359 aa21.54■■□□□ 1.04
LSM12-202ENST00000585388 RTKN2Q8IZC4 609 aa21.54■■□□□ 1.04
LSM12-202ENST00000585388 SCN4AP35499 1836 aa21.53■■□□□ 1.04
LSM12-202ENST00000585388 RIPK4P57078 832 aa21.53■■□□□ 1.04
LSM12-202ENST00000585388 TTLL7Q6ZT98 887 aa21.53■■□□□ 1.04
LSM12-202ENST00000585388 JMYQ8N9B5 988 aa21.53■■□□□ 1.04
LSM12-202ENST00000585388 ZBTB3Q9H5J0 574 aa21.53■■□□□ 1.04
LSM12-202ENST00000585388 BABAM1Q9NWV8 329 aa21.53■■□□□ 1.04
LSM12-202ENST00000585388 CRY2Q49AN0 593 aa21.52■■□□□ 1.04
LSM12-202ENST00000585388 MYBBP1AQ9BQG0 1328 aaKnown RBP21.52■■□□□ 1.03
LSM12-202ENST00000585388 IQCA1LA6NCM1 817 aa21.51■■□□□ 1.03
LSM12-202ENST00000585388 DDNO94850 711 aaPredicted RBP21.51■■□□□ 1.03
LSM12-202ENST00000585388 NUTM1Q86Y26 1132 aa21.51■■□□□ 1.03
LSM12-202ENST00000585388 UBN2Q6ZU65 1347 aa21.51■■□□□ 1.03
LSM12-202ENST00000585388 GPTP24298 496 aa21.5■■□□□ 1.03
LSM12-202ENST00000585388 TMPOP42166 694 aaKnown RBP21.5■■□□□ 1.03
LSM12-202ENST00000585388 GIGYF2Q6Y7W6 1299 aaKnown RBP21.5■■□□□ 1.03
LSM12-202ENST00000585388 RPGRQ92834 1020 aaKnown RBP21.5■■□□□ 1.03
LSM12-202ENST00000585388 ANKRD36CQ5JPF3 1778 aa21.5■■□□□ 1.03
LSM12-202ENST00000585388 L3MBTL3Q96JM7 780 aaPredicted RBP21.49■■□□□ 1.03
LSM12-202ENST00000585388 ZNF277Q9NRM2 450 aaPredicted RBP21.49■■□□□ 1.03
LSM12-202ENST00000585388 PARP10Q53GL7 1025 aa21.48■■□□□ 1.03
LSM12-202ENST00000585388 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
LSM12-202ENST00000585388 CHADLQ6NUI6 762 aa21.48■■□□□ 1.03
LSM12-202ENST00000585388 ZNF34Q8IZ26 560 aa21.48■■□□□ 1.03
LSM12-202ENST00000585388 SNED1Q8TER0 1413 aa21.47■■□□□ 1.03
LSM12-202ENST00000585388 OLFM4Q6UX06 510 aa21.47■■□□□ 1.03
LSM12-202ENST00000585388 PPP1R42Q7Z4L9 355 aa21.47■■□□□ 1.03
LSM12-202ENST00000585388 PSMD1Q99460 953 aa21.47■■□□□ 1.03
LSM12-202ENST00000585388 NTSR2O95665 410 aa21.46■■□□□ 1.03
LSM12-202ENST00000585388 EIF2S2P20042 333 aaKnown RBP21.46■■□□□ 1.03
LSM12-202ENST00000585388 HOXA10P31260 410 aaPredicted RBP21.46■■□□□ 1.03
LSM12-202ENST00000585388 IARSP41252 1262 aaKnown RBP21.46■■□□□ 1.03
LSM12-202ENST00000585388 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
LSM12-202ENST00000585388 SUSD4Q5VX71 490 aa21.46■■□□□ 1.03
LSM12-202ENST00000585388 WDR43Q15061 677 aaKnown RBP eCLIP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms