RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 TTLL6Q8N841 843 aa17.88■□□□□ 0.45
CDK5RAP3-233ENST00000584186 BCORQ6W2J9 1755 aa17.88■□□□□ 0.45
CDK5RAP3-233ENST00000584186 ARFGEF1Q9Y6D6 1849 aa17.88■□□□□ 0.45
CDK5RAP3-233ENST00000584186 LAMB4A4D0S4 1761 aa17.87■□□□□ 0.45
CDK5RAP3-233ENST00000584186 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDK5RAP3-233ENST00000584186 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-233ENST00000584186 HLFQ16534 295 aa17.86■□□□□ 0.45
CDK5RAP3-233ENST00000584186 SENP3-EIF4A1A0A087X0R7 540 aa17.85■□□□□ 0.45
CDK5RAP3-233ENST00000584186 EIF2S2P20042 333 aaKnown RBP17.85■□□□□ 0.45
CDK5RAP3-233ENST00000584186 KIF6Q6ZMV9 814 aa17.85■□□□□ 0.45
CDK5RAP3-233ENST00000584186 RNF181Q9P0P0 153 aa17.85■□□□□ 0.45
CDK5RAP3-233ENST00000584186 ZNF219Q9P2Y4 722 aaPredicted RBP17.85■□□□□ 0.45
CDK5RAP3-233ENST00000584186 RASSF7Q02833 373 aa17.84■□□□□ 0.45
CDK5RAP3-233ENST00000584186 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
CDK5RAP3-233ENST00000584186 BABAM1Q9NWV8 329 aa17.84■□□□□ 0.45
CDK5RAP3-233ENST00000584186 TRIM35Q9UPQ4 493 aa17.84■□□□□ 0.45
CDK5RAP3-233ENST00000584186 PDZRN3Q9UPQ7 1066 aa17.84■□□□□ 0.45
CDK5RAP3-233ENST00000584186 ANKRD31Q8N7Z5 1873 aa17.84■□□□□ 0.45
CDK5RAP3-233ENST00000584186 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.44
CDK5RAP3-233ENST00000584186 NECTIN2Q92692 538 aa17.83■□□□□ 0.44
CDK5RAP3-233ENST00000584186 ZBTB3Q9H5J0 574 aa17.83■□□□□ 0.44
CDK5RAP3-233ENST00000584186 DLEC1Q9Y238 1755 aa17.83■□□□□ 0.44
CDK5RAP3-233ENST00000584186 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
CDK5RAP3-233ENST00000584186 C21orf2O43822 256 aa17.82■□□□□ 0.44
CDK5RAP3-233ENST00000584186 GTF2E1P29083 439 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-233ENST00000584186 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
CDK5RAP3-233ENST00000584186 RGL2O15211 777 aa17.81■□□□□ 0.44
CDK5RAP3-233ENST00000584186 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 CHL1O00533 1208 aa17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 ANXA1P04083 346 aa17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 SRGNP10124 158 aa17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 GPTP24298 496 aa17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 CNKSR1Q969H4 720 aa17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 MASTLQ96GX5 879 aa17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 COL11A2P13942 1736 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-233ENST00000584186 APAF1O14727 1248 aa17.79■□□□□ 0.44
CDK5RAP3-233ENST00000584186 KIF3CO14782 793 aa17.79■□□□□ 0.44
CDK5RAP3-233ENST00000584186 LMNB1P20700 586 aa17.79■□□□□ 0.44
CDK5RAP3-233ENST00000584186 KRT24Q2M2I5 525 aa17.79■□□□□ 0.44
CDK5RAP3-233ENST00000584186 PROSER3Q2NL68 480 aa17.79■□□□□ 0.44
CDK5RAP3-233ENST00000584186 STYK1Q6J9G0 422 aa17.79■□□□□ 0.44
CDK5RAP3-233ENST00000584186 NMRK2Q9NPI5 230 aa17.79■□□□□ 0.44
CDK5RAP3-233ENST00000584186 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-233ENST00000584186 PDIA6Q15084 440 aa17.78■□□□□ 0.44
CDK5RAP3-233ENST00000584186 PRPF40BQ6NWY9 871 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-233ENST00000584186 CEP350Q5VT06 3117 aa17.77■□□□□ 0.44
CDK5RAP3-233ENST00000584186 NFKBIEO00221 500 aa17.77■□□□□ 0.44
CDK5RAP3-233ENST00000584186 NUTM1Q86Y26 1132 aa17.77■□□□□ 0.44
CDK5RAP3-233ENST00000584186 NYXQ9GZU5 481 aa17.77■□□□□ 0.44
CDK5RAP3-233ENST00000584186 KDM2BQ8NHM5 1336 aa17.76■□□□□ 0.43
CDK5RAP3-233ENST00000584186 NPR1P16066 1061 aa17.76■□□□□ 0.43
CDK5RAP3-233ENST00000584186 PRELPP51888 382 aa17.76■□□□□ 0.43
CDK5RAP3-233ENST00000584186 AIMP1Q12904 312 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-233ENST00000584186 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
CDK5RAP3-233ENST00000584186 ERFEQ4G0M1 354 aa17.75■□□□□ 0.43
CDK5RAP3-233ENST00000584186 GIGYF2Q6Y7W6 1299 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-233ENST00000584186 LRP10Q7Z4F1 713 aa17.75■□□□□ 0.43
CDK5RAP3-233ENST00000584186 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
CDK5RAP3-233ENST00000584186 SBF1O95248 1867 aa17.75■□□□□ 0.43
CDK5RAP3-233ENST00000584186 NUP98P52948 1817 aa17.75■□□□□ 0.43
CDK5RAP3-233ENST00000584186 UBN2Q6ZU65 1347 aa17.74■□□□□ 0.43
CDK5RAP3-233ENST00000584186 HDGFL1Q5TGJ6 251 aa17.74■□□□□ 0.43
CDK5RAP3-233ENST00000584186 SUSD4Q5VX71 490 aa17.74■□□□□ 0.43
CDK5RAP3-233ENST00000584186 COPS6Q7L5N1 327 aa17.74■□□□□ 0.43
CDK5RAP3-233ENST00000584186 XAGE3Q8WTP9 111 aa17.74■□□□□ 0.43
CDK5RAP3-233ENST00000584186 ABCC12Q96J65 1359 aa17.74■□□□□ 0.43
CDK5RAP3-233ENST00000584186 SLX4Q8IY92 1834 aa17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 KLRG2A4D1S0 409 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 C16orf71Q8IYS4 520 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 TAOK3Q9H2K8 898 aa17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 RRAGCQ9HB90 399 aa17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 CACNA1SQ13698 1873 aa17.73■□□□□ 0.43
CDK5RAP3-233ENST00000584186 ANP32CO43423 234 aa17.72■□□□□ 0.43
CDK5RAP3-233ENST00000584186 TOMM70O94826 608 aa17.72■□□□□ 0.43
CDK5RAP3-233ENST00000584186 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-233ENST00000584186 SOGA3Q5TF21 947 aa17.72■□□□□ 0.43
CDK5RAP3-233ENST00000584186 DDX21Q9NR30 783 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDK5RAP3-233ENST00000584186 CHPF2Q9P2E5 772 aa17.72■□□□□ 0.43
CDK5RAP3-233ENST00000584186 ALDH1B1P30837 517 aa17.71■□□□□ 0.43
CDK5RAP3-233ENST00000584186 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.43
CDK5RAP3-233ENST00000584186 PPP1R42Q7Z4L9 355 aa17.71■□□□□ 0.43
CDK5RAP3-233ENST00000584186 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-233ENST00000584186 ZC3H4Q9UPT8 1303 aaKnown RBP17.71■□□□□ 0.42
CDK5RAP3-233ENST00000584186 NTSR2O95665 410 aa17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 GNAI1P63096 354 aa17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 PARP10Q53GL7 1025 aa17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 CCDC93Q567U6 631 aa17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 OLFM4Q6UX06 510 aa17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 MRS2Q9HD23 443 aa17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 IFT57Q9NWB7 429 aa17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 TNRC6CQ9HCJ0 1690 aaKnown RBP17.7■□□□□ 0.42
CDK5RAP3-233ENST00000584186 IBTKQ9P2D0 1353 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-233ENST00000584186 ELL2O00472 640 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-233ENST00000584186 HOXB7P09629 217 aa17.69■□□□□ 0.42
CDK5RAP3-233ENST00000584186 HSPA6P17066 643 aa17.69■□□□□ 0.42
CDK5RAP3-233ENST00000584186 C7orf43Q8WVR3 580 aa17.69■□□□□ 0.42
CDK5RAP3-233ENST00000584186 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
CDK5RAP3-233ENST00000584186 UTP14AQ9BVJ6 771 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms