RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.347e-10■□□□□ 10.2
CDK5RAP3-227ENST00000583352 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 STYK1Q6J9G0 422 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 LTBP3Q9NS15 1303 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 MASTLQ96GX5 879 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 FER1L6Q2WGJ9 1857 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.35
CDK5RAP3-227ENST00000583352 SRGNP10124 158 aa12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PRPF40BQ6NWY9 871 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 MCM10Q7L590 875 aa12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 POTECB2RU33 542 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 ANP32CO43423 234 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
CDK5RAP3-227ENST00000583352 RGL2O15211 777 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NPR1P16066 1061 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NIP7Q9Y221 180 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NEFMP07197 916 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 COL13A1Q5TAT6 717 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
CDK5RAP3-227ENST00000583352 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 C7orf43Q8WVR3 580 aa12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 LAMB4A4D0S4 1761 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 RTKN2Q8IZC4 609 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HLFQ16534 295 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 SCN4AP35499 1836 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NYXQ9GZU5 481 aa12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 OLFM4Q6UX06 510 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 PRKRIP1Q9H875 184 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 MKRN1Q9UHC7 482 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 DLG5Q8TDM6 1919 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 MAP3K15Q6ZN16 1313 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 CENPBP07199 599 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 SYNE4Q8N205 404 aa12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NUP98P52948 1817 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CAPN15O75808 1086 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CRY2Q49AN0 593 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PLEKHF1Q96S99 279 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 MAPK8IP3Q9UPT6 1336 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 ABCC12Q96J65 1359 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 FZD9O00144 591 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 MYL6BP14649 208 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms