RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 ARXQ96QS3 562 aa15.56■□□□□ 0.08
SNRPD1-204ENST00000582475 MTFR1LQ9H019 292 aa15.56■□□□□ 0.08
SNRPD1-204ENST00000582475 CICQ96RK0 1608 aaPredicted RBP15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 ERBB4Q15303 1308 aa15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 ZPR1O75312 459 aa15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 MYL6BP14649 208 aa15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 PDIA6Q15084 440 aa15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 TWISTNBQ3B726 338 aaPredicted RBP15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 CHMP4AQ9BY43 222 aa15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 SPON1Q9HCB6 807 aa15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 SRP68Q9UHB9 627 aaKnown RBP15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 TBC1D2BQ9UPU7 963 aa15.55■□□□□ 0.08
SNRPD1-204ENST00000582475 DDX21Q9NR30 783 aaKnown RBP eCLIP15.54■□□□□ 0.08
SNRPD1-204ENST00000582475 NARFQ9UHQ1 456 aa15.54■□□□□ 0.08
SNRPD1-204ENST00000582475 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
SNRPD1-204ENST00000582475 COL15A1P39059 1388 aa15.53■□□□□ 0.08
SNRPD1-204ENST00000582475 VAMP4O75379 141 aa15.53■□□□□ 0.08
SNRPD1-204ENST00000582475 ANXA1P04083 346 aa15.53■□□□□ 0.08
SNRPD1-204ENST00000582475 USPL1Q5W0Q7 1092 aa15.53■□□□□ 0.08
SNRPD1-204ENST00000582475 MSL1Q68DK7 614 aa15.53■□□□□ 0.08
SNRPD1-204ENST00000582475 TRMT2AQ8IZ69 625 aaKnown RBP15.53■□□□□ 0.08
SNRPD1-204ENST00000582475 USP42Q9H9J4 1324 aaKnown RBP15.52■□□□□ 0.08
SNRPD1-204ENST00000582475 GYS1P13807 737 aa15.52■□□□□ 0.08
SNRPD1-204ENST00000582475 PROSER3Q2NL68 480 aa15.52■□□□□ 0.08
SNRPD1-204ENST00000582475 CCDC30Q5VVM6 783 aa15.52■□□□□ 0.08
SNRPD1-204ENST00000582475 DZIP3Q86Y13 1208 aaKnown RBP15.52■□□□□ 0.08
SNRPD1-204ENST00000582475 NLGN1Q8N2Q7 840 aa15.52■□□□□ 0.08
SNRPD1-204ENST00000582475 DBF4Q9UBU7 674 aaPredicted RBP15.52■□□□□ 0.08
SNRPD1-204ENST00000582475 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.07
SNRPD1-204ENST00000582475 QSER1Q2KHR3 1735 aa15.51■□□□□ 0.07
SNRPD1-204ENST00000582475 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
SNRPD1-204ENST00000582475 CAMTA2O94983 1202 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 POLD1P28340 1107 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 PTGER2P43116 358 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 FKBP8Q14318 412 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 TTLL7Q6ZT98 887 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 COPS6Q7L5N1 327 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 LRP10Q7Z4F1 713 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 BCL2L12Q9HB09 334 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 HYPKQ9NX55 129 aa15.5■□□□□ 0.07
SNRPD1-204ENST00000582475 CASZ1Q86V15 1759 aa15.49■□□□□ 0.07
SNRPD1-204ENST00000582475 ZBED9Q6R2W3 1325 aa15.49■□□□□ 0.07
SNRPD1-204ENST00000582475 TCERG1O14776 1098 aaKnown RBP15.49■□□□□ 0.07
SNRPD1-204ENST00000582475 AIMP1Q12904 312 aaKnown RBP15.49■□□□□ 0.07
SNRPD1-204ENST00000582475 XAGE3Q8WTP9 111 aa15.49■□□□□ 0.07
SNRPD1-204ENST00000582475 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
SNRPD1-204ENST00000582475 TM4SF1P30408 202 aa15.48■□□□□ 0.07
SNRPD1-204ENST00000582475 KIF6Q6ZMV9 814 aa15.48■□□□□ 0.07
SNRPD1-204ENST00000582475 STK31Q9BXU1 1019 aa15.48■□□□□ 0.07
SNRPD1-204ENST00000582475 ERVV-1B6SEH8 477 aa15.47■□□□□ 0.07
SNRPD1-204ENST00000582475 CLEC4GQ6UXB4 293 aa15.47■□□□□ 0.07
SNRPD1-204ENST00000582475 LAMB4A4D0S4 1761 aa15.47■□□□□ 0.07
SNRPD1-204ENST00000582475 MAP3K15Q6ZN16 1313 aa15.46■□□□□ 0.07
SNRPD1-204ENST00000582475 GABBR2O75899 941 aa15.46■□□□□ 0.07
SNRPD1-204ENST00000582475 MMP10P09238 476 aa15.46■□□□□ 0.07
SNRPD1-204ENST00000582475 HLFQ16534 295 aa15.46■□□□□ 0.07
SNRPD1-204ENST00000582475 PHAXQ9H814 394 aaKnown RBP15.46■□□□□ 0.07
SNRPD1-204ENST00000582475 PPP1R1BQ9UD71 204 aaPredicted RBP15.46■□□□□ 0.07
SNRPD1-204ENST00000582475 ZNF652Q9Y2D9 606 aa15.46■□□□□ 0.07
SNRPD1-204ENST00000582475 RGL2O15211 777 aa15.45■□□□□ 0.06
SNRPD1-204ENST00000582475 NFIXQ14938 502 aa15.45■□□□□ 0.06
SNRPD1-204ENST00000582475 TBC1D9BQ66K14 1250 aa15.45■□□□□ 0.06
SNRPD1-204ENST00000582475 BICDL1Q6ZP65 573 aa15.45■□□□□ 0.06
SNRPD1-204ENST00000582475 ANKRD13DQ6ZTN6 518 aa15.45■□□□□ 0.06
SNRPD1-204ENST00000582475 ZBTB3Q9H5J0 574 aa15.45■□□□□ 0.06
SNRPD1-204ENST00000582475 PARP3Q9Y6F1 533 aa15.45■□□□□ 0.06
SNRPD1-204ENST00000582475 CT47B1P0C2W7 299 aaPredicted RBP15.43■□□□□ 0.06
SNRPD1-204ENST00000582475 GIGYF2Q6Y7W6 1299 aaKnown RBP15.43■□□□□ 0.06
SNRPD1-204ENST00000582475 G2E3Q7L622 706 aa15.43■□□□□ 0.06
SNRPD1-204ENST00000582475 PLBD2Q8NHP8 589 aa15.43■□□□□ 0.06
SNRPD1-204ENST00000582475 ZNF428Q96B54 188 aa15.43■□□□□ 0.06
SNRPD1-204ENST00000582475 SETDB2Q96T68 719 aa15.43■□□□□ 0.06
SNRPD1-204ENST00000582475 POLRMTO00411 1230 aaKnown RBP15.42■□□□□ 0.06
SNRPD1-204ENST00000582475 SERPINB2P05120 415 aa15.42■□□□□ 0.06
SNRPD1-204ENST00000582475 DDR1Q08345 913 aa15.42■□□□□ 0.06
SNRPD1-204ENST00000582475 RIC3Q7Z5B4 369 aa15.42■□□□□ 0.06
SNRPD1-204ENST00000582475 YTHDC1Q96MU7 727 aaKnown RBP15.42■□□□□ 0.06
SNRPD1-204ENST00000582475 NIP7Q9Y221 180 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNRPD1-204ENST00000582475 C4AP0C0L4 1744 aa15.41■□□□□ 0.06
SNRPD1-204ENST00000582475 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
SNRPD1-204ENST00000582475 TCIRG1Q13488 830 aa15.41■□□□□ 0.06
SNRPD1-204ENST00000582475 HSP90AB3PQ58FF7 597 aa15.41■□□□□ 0.06
SNRPD1-204ENST00000582475 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
SNRPD1-204ENST00000582475 FLIIQ13045 1269 aa15.4■□□□□ 0.06
SNRPD1-204ENST00000582475 ALDH1L2Q3SY69 923 aa15.4■□□□□ 0.06
SNRPD1-204ENST00000582475 KSR2Q6VAB6 950 aa15.4■□□□□ 0.06
SNRPD1-204ENST00000582475 ZNF34Q8IZ26 560 aa15.4■□□□□ 0.06
SNRPD1-204ENST00000582475 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
SNRPD1-204ENST00000582475 SSH1Q8WYL5 1049 aa15.4■□□□□ 0.06
SNRPD1-204ENST00000582475 GPTP24298 496 aa15.39■□□□□ 0.05
SNRPD1-204ENST00000582475 KLHL34Q8N239 644 aa15.39■□□□□ 0.05
SNRPD1-204ENST00000582475 PI4KAP2A4QPH2 592 aa15.38■□□□□ 0.05
SNRPD1-204ENST00000582475 FAM177BA6PVY3 158 aa15.38■□□□□ 0.05
SNRPD1-204ENST00000582475 PI4KAP1Q8N8J0 262 aa15.38■□□□□ 0.05
SNRPD1-204ENST00000582475 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
SNRPD1-204ENST00000582475 MAP3K2Q9Y2U5 619 aa15.38■□□□□ 0.05
SNRPD1-204ENST00000582475 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 RARSP54136 660 aaKnown RBP15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 FKBP5Q13451 457 aaPredicted RBP15.37■□□□□ 0.05
SNRPD1-204ENST00000582475 SUSD4Q5VX71 490 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms