RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 STYK1Q6J9G0 422 aa12.02□□□□□ -0.49
CDK5RAP3-224ENST00000582275 VSIG10Q8N0Z9 540 aa12.02□□□□□ -0.49
CDK5RAP3-224ENST00000582275 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
CDK5RAP3-224ENST00000582275 ABT1Q9ULW3 272 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-224ENST00000582275 NPHP1O15259 732 aa12.01□□□□□ -0.49
CDK5RAP3-224ENST00000582275 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
CDK5RAP3-224ENST00000582275 SLC52A2Q9HAB3 445 aa12.01□□□□□ -0.49
CDK5RAP3-224ENST00000582275 ZBTB1Q9Y2K1 713 aa12.01□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
CDK5RAP3-224ENST00000582275 STARD3NLO95772 234 aa12□□□□□ -0.49
CDK5RAP3-224ENST00000582275 EPHX2P34913 555 aa12□□□□□ -0.49
CDK5RAP3-224ENST00000582275 AKAP4Q5JQC9 854 aa12□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CNTROBQ8N137 903 aa12□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CA12O43570 354 aa11.99□□□□□ -0.49
CDK5RAP3-224ENST00000582275 TNNT2P45379 298 aaPredicted RBP11.99□□□□□ -0.49
CDK5RAP3-224ENST00000582275 ST5P78524 1137 aa11.99□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CCDC93Q567U6 631 aa11.99□□□□□ -0.49
CDK5RAP3-224ENST00000582275 PRPF40BQ6NWY9 871 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-224ENST00000582275 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-224ENST00000582275 MASTLQ96GX5 879 aa11.99□□□□□ -0.49
CDK5RAP3-224ENST00000582275 SCN11AQ9UI33 1791 aa11.98□□□□□ -0.49
CDK5RAP3-224ENST00000582275 SRGNP10124 158 aa11.98□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CANXP27824 592 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-224ENST00000582275 EIF5P55010 431 aaKnown RBP11.98□□□□□ -0.49
CDK5RAP3-224ENST00000582275 PRR5LQ6MZQ0 368 aa11.98□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CNBD1Q8NA66 436 aa11.98□□□□□ -0.49
CDK5RAP3-224ENST00000582275 PDE4DIPQ5VU43 2346 aa11.97□□□□□ -0.49
CDK5RAP3-224ENST00000582275 FKBP4Q02790 459 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDK5RAP3-224ENST00000582275 TBC1D9BQ66K14 1250 aa11.97□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CAPNS2Q96L46 248 aa11.97□□□□□ -0.49
CDK5RAP3-224ENST00000582275 SETDB2Q96T68 719 aa11.97□□□□□ -0.49
CDK5RAP3-224ENST00000582275 TEX13AQ9BXU3 409 aaPredicted RBP11.97□□□□□ -0.49
CDK5RAP3-224ENST00000582275 ANKRD31Q8N7Z5 1873 aa11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 MAP2K2P36507 400 aa11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 MAP1SQ66K74 1059 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 SULT6B1Q6IMI4 303 aa11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 RTKN2Q8IZC4 609 aa11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 CFAP44Q96MT7 982 aa11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 GPR101Q96P66 508 aaPredicted RBP11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDK5RAP3-224ENST00000582275 MRC1P22897 1456 aa11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 SLC39A6Q13433 755 aa11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 TTC5Q8N0Z6 440 aa11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 GPC2Q8N158 579 aa11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 SLX4Q8IY92 1834 aa11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 ADAMTSL1Q8N6G6 1762 aa11.95□□□□□ -0.5
CDK5RAP3-224ENST00000582275 THSD7BQ9C0I4 1608 aa11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 ZNF541Q9H0D2 1346 aa11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 NPR1P16066 1061 aa11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 IL6STP40189 918 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 C7orf43Q8WVR3 580 aa11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 ARFGEF2Q9Y6D5 1785 aa11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 COL11A2P13942 1736 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-224ENST00000582275 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
CDK5RAP3-224ENST00000582275 FZD9O00144 591 aa11.93□□□□□ -0.5
CDK5RAP3-224ENST00000582275 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-224ENST00000582275 JDP2Q8WYK2 163 aa11.93□□□□□ -0.5
CDK5RAP3-224ENST00000582275 MCOLN1Q9GZU1 580 aa11.93□□□□□ -0.5
CDK5RAP3-224ENST00000582275 LGR6Q9HBX8 967 aa11.93□□□□□ -0.5
CDK5RAP3-224ENST00000582275 SCN7AQ01118 1682 aa11.92□□□□□ -0.5
CDK5RAP3-224ENST00000582275 IARSP41252 1262 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-224ENST00000582275 CCDC24Q8N4L8 307 aa11.92□□□□□ -0.5
CDK5RAP3-224ENST00000582275 ZNF277Q9NRM2 450 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-224ENST00000582275 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
CDK5RAP3-224ENST00000582275 ZNF330Q9Y3S2 320 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-224ENST00000582275 EIF6P56537 245 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-224ENST00000582275 GRM1Q13255 1194 aa11.91□□□□□ -0.5
CDK5RAP3-224ENST00000582275 CYP4F22Q6NT55 531 aa11.91□□□□□ -0.5
CDK5RAP3-224ENST00000582275 NBPF5PQ86XG9 351 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-224ENST00000582275 HHIPL1Q96JK4 782 aa11.91□□□□□ -0.5
CDK5RAP3-224ENST00000582275 TLL2Q9Y6L7 1015 aa11.91□□□□□ -0.5
CDK5RAP3-224ENST00000582275 ALDH1B1P30837 517 aa11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 IL13P35225 146 aa11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 BRPF1P55201 1214 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 DGKZQ13574 1117 aa11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 GRIPAP1Q4V328 841 aa11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 CLEC4GQ6UXB4 293 aa11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 USP50Q70EL3 339 aaPredicted RBP11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 ZNF652Q9Y2D9 606 aa11.9□□□□□ -0.5
CDK5RAP3-224ENST00000582275 CACNA1SQ13698 1873 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 KLRG2A4D1S0 409 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 RGL2O15211 777 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 CAMTA2O94983 1202 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 MORC1Q86VD1 984 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 SYNE4Q8N205 404 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 PSMD1Q99460 953 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 HEG1Q9ULI3 1381 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 TRPM7Q96QT4 1865 aa11.89□□□□□ -0.51
CDK5RAP3-224ENST00000582275 UBR2Q8IWV8 1755 aa11.88□□□□□ -0.51
CDK5RAP3-224ENST00000582275 PRPF38BQ5VTL8 546 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-224ENST00000582275 DZIP3Q86Y13 1208 aaKnown RBP11.88□□□□□ -0.51
CDK5RAP3-224ENST00000582275 TSKSQ9UJT2 592 aa11.88□□□□□ -0.51
CDK5RAP3-224ENST00000582275 TEFQ10587 303 aa11.87□□□□□ -0.51
CDK5RAP3-224ENST00000582275 CST9Q5W186 159 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms