RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-223ENST00000582114 THUMPD2Q9BTF0 503 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-223ENST00000582114 GLTPD2A6NH11 291 aa15.44■□□□□ 0.06
CDK5RAP3-223ENST00000582114 HTATSF1O43719 755 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NEFMP07197 916 aa15.44■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NGEFQ8N5V2 710 aa15.44■□□□□ 0.06
CDK5RAP3-223ENST00000582114 WDR90Q96KV7 1748 aa15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 SLX4Q8IY92 1834 aa15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 DLG5Q8TDM6 1919 aa15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 PRPF40BQ6NWY9 871 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 DNAJC5GQ8N7S2 189 aa15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 PDZRN3Q9UPQ7 1066 aa15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NIP7Q9Y221 180 aaKnown RBP eCLIP15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 ZNF652Q9Y2D9 606 aa15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-223ENST00000582114 SRGNP10124 158 aa15.42■□□□□ 0.06
CDK5RAP3-223ENST00000582114 FSTL1Q12841 308 aa15.42■□□□□ 0.06
CDK5RAP3-223ENST00000582114 ERFEQ4G0M1 354 aa15.42■□□□□ 0.06
CDK5RAP3-223ENST00000582114 CNKSR1Q969H4 720 aa15.42■□□□□ 0.06
CDK5RAP3-223ENST00000582114 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
CDK5RAP3-223ENST00000582114 HLFQ16534 295 aa15.41■□□□□ 0.06
CDK5RAP3-223ENST00000582114 STYK1Q6J9G0 422 aa15.41■□□□□ 0.06
CDK5RAP3-223ENST00000582114 CLEC4GQ6UXB4 293 aa15.41■□□□□ 0.06
CDK5RAP3-223ENST00000582114 PLEKHF1Q96S99 279 aa15.41■□□□□ 0.06
CDK5RAP3-223ENST00000582114 FER1L6Q2WGJ9 1857 aa15.41■□□□□ 0.06
CDK5RAP3-223ENST00000582114 LAMB4A4D0S4 1761 aa15.4■□□□□ 0.06
CDK5RAP3-223ENST00000582114 VEGFAP15692 232 aaPredicted RBP15.4■□□□□ 0.06
CDK5RAP3-223ENST00000582114 NFE2L2Q16236 605 aa15.4■□□□□ 0.06
CDK5RAP3-223ENST00000582114 IFFO2Q5TF58 517 aa15.4■□□□□ 0.06
CDK5RAP3-223ENST00000582114 SMC1BQ8NDV3 1235 aa15.4■□□□□ 0.06
CDK5RAP3-223ENST00000582114 TAOK3Q9H2K8 898 aa15.4■□□□□ 0.06
CDK5RAP3-223ENST00000582114 RRP7AQ9Y3A4 280 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-223ENST00000582114 MAPK8IP3Q9UPT6 1336 aa15.39■□□□□ 0.05
CDK5RAP3-223ENST00000582114 KDM3BQ7LBC6 1761 aa15.39■□□□□ 0.05
CDK5RAP3-223ENST00000582114 POTECB2RU33 542 aa15.38■□□□□ 0.05
CDK5RAP3-223ENST00000582114 MYL6BP14649 208 aa15.38■□□□□ 0.05
CDK5RAP3-223ENST00000582114 EIF4A1P60842 406 aaKnown RBP15.38■□□□□ 0.05
CDK5RAP3-223ENST00000582114 DPY19L2Q6NUT2 758 aa15.38■□□□□ 0.05
CDK5RAP3-223ENST00000582114 OLFM4Q6UX06 510 aa15.38■□□□□ 0.05
CDK5RAP3-223ENST00000582114 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
CDK5RAP3-223ENST00000582114 ARFGEF2Q9Y6D5 1785 aa15.38■□□□□ 0.05
CDK5RAP3-223ENST00000582114 DICER1Q9UPY3 1922 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-223ENST00000582114 NPR1P16066 1061 aa15.37■□□□□ 0.05
CDK5RAP3-223ENST00000582114 GTF2E1P29083 439 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-223ENST00000582114 TTLL7Q6ZT98 887 aa15.37■□□□□ 0.05
CDK5RAP3-223ENST00000582114 PNISRQ8TF01 805 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-223ENST00000582114 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
CDK5RAP3-223ENST00000582114 LTBP3Q9NS15 1303 aa15.37■□□□□ 0.05
CDK5RAP3-223ENST00000582114 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-223ENST00000582114 NUTM1Q86Y26 1132 aa15.36■□□□□ 0.05
CDK5RAP3-223ENST00000582114 ZBTB3Q9H5J0 574 aa15.36■□□□□ 0.05
CDK5RAP3-223ENST00000582114 ABCC12Q96J65 1359 aa15.36■□□□□ 0.05
CDK5RAP3-223ENST00000582114 GPTP24298 496 aa15.35■□□□□ 0.05
CDK5RAP3-223ENST00000582114 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
CDK5RAP3-223ENST00000582114 SOGA3Q5TF21 947 aa15.35■□□□□ 0.05
CDK5RAP3-223ENST00000582114 KIF6Q6ZMV9 814 aa15.35■□□□□ 0.05
CDK5RAP3-223ENST00000582114 C7orf43Q8WVR3 580 aa15.35■□□□□ 0.05
CDK5RAP3-223ENST00000582114 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-223ENST00000582114 MAP3K15Q6ZN16 1313 aa15.35■□□□□ 0.05
CDK5RAP3-223ENST00000582114 PNNQ9H307 717 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-223ENST00000582114 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
CDK5RAP3-223ENST00000582114 KLRG2A4D1S0 409 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP3-223ENST00000582114 POTEIP0CG38 1075 aa15.33■□□□□ 0.04
CDK5RAP3-223ENST00000582114 POTEJP0CG39 1038 aa15.33■□□□□ 0.04
CDK5RAP3-223ENST00000582114 RIPK4P57078 832 aa15.33■□□□□ 0.04
CDK5RAP3-223ENST00000582114 NUP98P52948 1817 aa15.33■□□□□ 0.04
CDK5RAP3-223ENST00000582114 ERVV-1B6SEH8 477 aa15.32■□□□□ 0.04
CDK5RAP3-223ENST00000582114 RGL2O15211 777 aa15.32■□□□□ 0.04
CDK5RAP3-223ENST00000582114 EIF2S2P20042 333 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-223ENST00000582114 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
CDK5RAP3-223ENST00000582114 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-223ENST00000582114 NYXQ9GZU5 481 aa15.32■□□□□ 0.04
CDK5RAP3-223ENST00000582114 UBN2Q6ZU65 1347 aa15.32■□□□□ 0.04
CDK5RAP3-223ENST00000582114 ANXA1P04083 346 aa15.31■□□□□ 0.04
CDK5RAP3-223ENST00000582114 SLC51AQ86UW1 340 aa15.31■□□□□ 0.04
CDK5RAP3-223ENST00000582114 CCDC146Q8IYE0 955 aa15.31■□□□□ 0.04
CDK5RAP3-223ENST00000582114 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
CDK5RAP3-223ENST00000582114 ZNF541Q9H0D2 1346 aa15.31■□□□□ 0.04
CDK5RAP3-223ENST00000582114 PCNTO95613 3336 aa15.3■□□□□ 0.04
CDK5RAP3-223ENST00000582114 ALDH1B1P30837 517 aa15.3■□□□□ 0.04
CDK5RAP3-223ENST00000582114 RALBP1Q15311 655 aa15.3■□□□□ 0.04
CDK5RAP3-223ENST00000582114 NEUROD2Q15784 382 aa15.3■□□□□ 0.04
CDK5RAP3-223ENST00000582114 SUSD4Q5VX71 490 aa15.3■□□□□ 0.04
CDK5RAP3-223ENST00000582114 JMYQ8N9B5 988 aa15.3■□□□□ 0.04
CDK5RAP3-223ENST00000582114 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-223ENST00000582114 TMPOP42166 694 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-223ENST00000582114 PROSER3Q2NL68 480 aa15.29■□□□□ 0.04
CDK5RAP3-223ENST00000582114 RTKN2Q8IZC4 609 aa15.29■□□□□ 0.04
CDK5RAP3-223ENST00000582114 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
CDK5RAP3-223ENST00000582114 RPGRQ92834 1020 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-223ENST00000582114 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-223ENST00000582114 CRY2Q49AN0 593 aa15.28■□□□□ 0.04
CDK5RAP3-223ENST00000582114 CHADLQ6NUI6 762 aa15.28■□□□□ 0.04
CDK5RAP3-223ENST00000582114 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-223ENST00000582114 NTSR2O95665 410 aa15.27■□□□□ 0.04
CDK5RAP3-223ENST00000582114 PDIA6Q15084 440 aa15.27■□□□□ 0.04
CDK5RAP3-223ENST00000582114 EAPPQ56P03 285 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-223ENST00000582114 GIGYF2Q6Y7W6 1299 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-223ENST00000582114 C3orf67Q6ZVT6 689 aa15.27■□□□□ 0.04
CDK5RAP3-223ENST00000582114 ZNF34Q8IZ26 560 aa15.27■□□□□ 0.04
CDK5RAP3-223ENST00000582114 ZNF428Q96B54 188 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 1498 ms