RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 RARSP54136 660 aaKnown RBP13.34□□□□□ -0.27
CCDC47-203ENST00000580986 NBPF14Q5TI25 921 aa13.34□□□□□ -0.27
CCDC47-203ENST00000580986 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
CCDC47-203ENST00000580986 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
CCDC47-203ENST00000580986 AK7Q96M32 723 aa13.34□□□□□ -0.27
CCDC47-203ENST00000580986 CHPF2Q9P2E5 772 aa13.34□□□□□ -0.27
CCDC47-203ENST00000580986 RTCBQ9Y3I0 505 aaKnown RBP13.34□□□□□ -0.27
CCDC47-203ENST00000580986 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
CCDC47-203ENST00000580986 SCN7AQ01118 1682 aa13.34□□□□□ -0.27
CCDC47-203ENST00000580986 COL15A1P39059 1388 aa13.33□□□□□ -0.27
CCDC47-203ENST00000580986 KCNQ4P56696 695 aa13.33□□□□□ -0.28
CCDC47-203ENST00000580986 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
CCDC47-203ENST00000580986 KIF16BQ96L93 1317 aa13.33□□□□□ -0.28
CCDC47-203ENST00000580986 A0A087WZG4 1122 aa13.32□□□□□ -0.28
CCDC47-203ENST00000580986 GNPATO15228 680 aa13.32□□□□□ -0.28
CCDC47-203ENST00000580986 SSH1Q8WYL5 1049 aa13.32□□□□□ -0.28
CCDC47-203ENST00000580986 STK32BQ9NY57 414 aa13.32□□□□□ -0.28
CCDC47-203ENST00000580986 PTPRCP08575 1304 aa13.32□□□□□ -0.28
CCDC47-203ENST00000580986 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
CCDC47-203ENST00000580986 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
CCDC47-203ENST00000580986 ANO8Q9HCE9 1232 aaPredicted RBP13.31□□□□□ -0.28
CCDC47-203ENST00000580986 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
CCDC47-203ENST00000580986 ERVV-1B6SEH8 477 aa13.3□□□□□ -0.28
CCDC47-203ENST00000580986 PROSER3Q2NL68 480 aa13.3□□□□□ -0.28
CCDC47-203ENST00000580986 MRPL50Q8N5N7 158 aaKnown RBP13.3□□□□□ -0.28
CCDC47-203ENST00000580986 ARHGAP45Q92619 1136 aa13.3□□□□□ -0.28
CCDC47-203ENST00000580986 SMC4Q9NTJ3 1288 aa13.3□□□□□ -0.28
CCDC47-203ENST00000580986 IBTKQ9P2D0 1353 aaPredicted RBP13.3□□□□□ -0.28
CCDC47-203ENST00000580986 N4BP2Q86UW6 1770 aaPredicted RBP13.3□□□□□ -0.28
CCDC47-203ENST00000580986 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.29□□□□□ -0.28
CCDC47-203ENST00000580986 DDX58O95786 925 aaKnown RBP13.29□□□□□ -0.28
CCDC47-203ENST00000580986 CANXP27824 592 aaKnown RBP13.29□□□□□ -0.28
CCDC47-203ENST00000580986 FLIIQ13045 1269 aa13.29□□□□□ -0.28
CCDC47-203ENST00000580986 TRAPPC3LQ5T215 181 aa13.29□□□□□ -0.28
CCDC47-203ENST00000580986 NECTIN2Q92692 538 aa13.29□□□□□ -0.28
CCDC47-203ENST00000580986 TFCP2L1Q9NZI6 479 aa13.29□□□□□ -0.28
CCDC47-203ENST00000580986 CASZ1Q86V15 1759 aa13.29□□□□□ -0.28
CCDC47-203ENST00000580986 ARFGEF2Q9Y6D5 1785 aa13.29□□□□□ -0.28
CCDC47-203ENST00000580986 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
CCDC47-203ENST00000580986 COL24A1Q17RW2 1714 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 ANKRD36CQ5JPF3 1778 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 MYL6BP14649 208 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 NARFQ9UHQ1 456 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 PNPLA7Q6ZV29 1317 aa13.28□□□□□ -0.28
CCDC47-203ENST00000580986 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
CCDC47-203ENST00000580986 IPO8O15397 1037 aaKnown RBP13.27□□□□□ -0.29
CCDC47-203ENST00000580986 KIF6Q6ZMV9 814 aa13.27□□□□□ -0.29
CCDC47-203ENST00000580986 COPS6Q7L5N1 327 aa13.27□□□□□ -0.29
CCDC47-203ENST00000580986 AMIGO3Q86WK7 504 aa13.27□□□□□ -0.29
CCDC47-203ENST00000580986 DZIP3Q86Y13 1208 aaKnown RBP13.27□□□□□ -0.29
CCDC47-203ENST00000580986 SLC16A10Q8TF71 515 aa13.27□□□□□ -0.29
CCDC47-203ENST00000580986 XAGE3Q8WTP9 111 aa13.27□□□□□ -0.29
CCDC47-203ENST00000580986 ARHGEF1Q92888 912 aaKnown RBP13.27□□□□□ -0.29
CCDC47-203ENST00000580986 ATP10DQ9P241 1426 aa13.27□□□□□ -0.29
CCDC47-203ENST00000580986 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
CCDC47-203ENST00000580986 ANXA1P04083 346 aa13.26□□□□□ -0.29
CCDC47-203ENST00000580986 RFC4P35249 363 aa13.26□□□□□ -0.29
CCDC47-203ENST00000580986 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
CCDC47-203ENST00000580986 NUP98P52948 1817 aa13.26□□□□□ -0.29
CCDC47-203ENST00000580986 KSR2Q6VAB6 950 aa13.26□□□□□ -0.29
CCDC47-203ENST00000580986 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
CCDC47-203ENST00000580986 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
CCDC47-203ENST00000580986 ZNF652Q9Y2D9 606 aa13.26□□□□□ -0.29
CCDC47-203ENST00000580986 ADCY9O60503 1353 aa13.25□□□□□ -0.29
CCDC47-203ENST00000580986 RNF123Q5XPI4 1314 aa13.25□□□□□ -0.29
CCDC47-203ENST00000580986 BCAR3O75815 825 aa13.25□□□□□ -0.29
CCDC47-203ENST00000580986 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
CCDC47-203ENST00000580986 FKBP5Q13451 457 aaPredicted RBP13.25□□□□□ -0.29
CCDC47-203ENST00000580986 HSP90AB3PQ58FF7 597 aa13.25□□□□□ -0.29
CCDC47-203ENST00000580986 GIGYF2Q6Y7W6 1299 aaKnown RBP13.25□□□□□ -0.29
CCDC47-203ENST00000580986 TTLL7Q6ZT98 887 aa13.25□□□□□ -0.29
CCDC47-203ENST00000580986 G2E3Q7L622 706 aa13.25□□□□□ -0.29
CCDC47-203ENST00000580986 COL23A1Q86Y22 540 aaPredicted RBP13.25□□□□□ -0.29
CCDC47-203ENST00000580986 API5Q9BZZ5 524 aaKnown RBP13.25□□□□□ -0.29
CCDC47-203ENST00000580986 TCERG1O14776 1098 aaKnown RBP13.24□□□□□ -0.29
CCDC47-203ENST00000580986 ZPR1O75312 459 aa13.24□□□□□ -0.29
CCDC47-203ENST00000580986 ATF7IPQ6VMQ6 1270 aa13.24□□□□□ -0.29
CCDC47-203ENST00000580986 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
CCDC47-203ENST00000580986 BCL2L13Q9BXK5 485 aa13.24□□□□□ -0.29
CCDC47-203ENST00000580986 PI4KAP2A4QPH2 592 aa13.23□□□□□ -0.29
CCDC47-203ENST00000580986 PHF14O94880 888 aa13.23□□□□□ -0.29
CCDC47-203ENST00000580986 MS4A1P11836 297 aa13.23□□□□□ -0.29
CCDC47-203ENST00000580986 TRIM28Q13263 835 aaKnown RBP13.23□□□□□ -0.29
CCDC47-203ENST00000580986 ZKSCAN2Q63HK3 967 aa13.23□□□□□ -0.29
CCDC47-203ENST00000580986 PI4KAP1Q8N8J0 262 aa13.23□□□□□ -0.29
CCDC47-203ENST00000580986 TBC1D2BQ9UPU7 963 aa13.23□□□□□ -0.29
CCDC47-203ENST00000580986 ZNF330Q9Y3S2 320 aaPredicted RBP13.23□□□□□ -0.29
CCDC47-203ENST00000580986 ABCC4O15439 1325 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 GYS1P13807 737 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 TRIM27P14373 513 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 AIMP1Q12904 312 aaKnown RBP13.22□□□□□ -0.29
CCDC47-203ENST00000580986 RIC3Q7Z5B4 369 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 NLGN1Q8N2Q7 840 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
CCDC47-203ENST00000580986 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
CCDC47-203ENST00000580986 NOB1Q9ULX3 412 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms