RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 HEG1Q9ULI3 1381 aa15.74■□□□□ 0.11
CCDC84-209ENST00000580556 CCDC88AQ3V6T2 1871 aa15.74■□□□□ 0.11
CCDC84-209ENST00000580556 FANCIQ9NVI1 1328 aa15.73■□□□□ 0.11
CCDC84-209ENST00000580556 GLTPD2A6NH11 291 aa15.73■□□□□ 0.11
CCDC84-209ENST00000580556 POTECB2RU33 542 aa15.73■□□□□ 0.11
CCDC84-209ENST00000580556 TM4SF1P30408 202 aa15.73■□□□□ 0.11
CCDC84-209ENST00000580556 TRMT2AQ8IZ69 625 aaKnown RBP15.73■□□□□ 0.11
CCDC84-209ENST00000580556 TJP1Q07157 1748 aa15.72■□□□□ 0.11
CCDC84-209ENST00000580556 SLC39A6Q13433 755 aa15.72■□□□□ 0.11
CCDC84-209ENST00000580556 VSIG10Q8N0Z9 540 aa15.72■□□□□ 0.11
CCDC84-209ENST00000580556 FMNL2Q96PY5 1086 aa15.72■□□□□ 0.11
CCDC84-209ENST00000580556 SPINK5Q9NQ38 1064 aaPredicted RBP15.72■□□□□ 0.11
CCDC84-209ENST00000580556 MIS18AQ9NYP9 233 aa15.72■□□□□ 0.11
CCDC84-209ENST00000580556 LAS1LQ9Y4W2 734 aaKnown RBP15.72■□□□□ 0.11
CCDC84-209ENST00000580556 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.11
CCDC84-209ENST00000580556 SOS1Q07889 1333 aaPredicted RBP15.71■□□□□ 0.11
CCDC84-209ENST00000580556 AFDNP55196 1824 aaKnown RBP15.71■□□□□ 0.11
CCDC84-209ENST00000580556 LMNB1P20700 586 aa15.71■□□□□ 0.11
CCDC84-209ENST00000580556 EIF4A1P60842 406 aaKnown RBP15.71■□□□□ 0.11
CCDC84-209ENST00000580556 INTS5Q6P9B9 1019 aaKnown RBP15.71■□□□□ 0.11
CCDC84-209ENST00000580556 YTHDC1Q96MU7 727 aaKnown RBP15.71■□□□□ 0.11
CCDC84-209ENST00000580556 KCNQ3O43525 872 aa15.7■□□□□ 0.1
CCDC84-209ENST00000580556 HOXB7P09629 217 aa15.7■□□□□ 0.1
CCDC84-209ENST00000580556 USPL1Q5W0Q7 1092 aa15.7■□□□□ 0.1
CCDC84-209ENST00000580556 TSR2Q969E8 191 aaKnown RBP15.7■□□□□ 0.1
CCDC84-209ENST00000580556 ZNF496Q96IT1 587 aaPredicted RBP15.7■□□□□ 0.1
CCDC84-209ENST00000580556 MKRN1Q9UHC7 482 aaKnown RBP15.7■□□□□ 0.1
CCDC84-209ENST00000580556 ZC3H4Q9UPT8 1303 aaKnown RBP15.69■□□□□ 0.1
CCDC84-209ENST00000580556 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
CCDC84-209ENST00000580556 CDCA7LQ96GN5 454 aa15.69■□□□□ 0.1
CCDC84-209ENST00000580556 LAMB4A4D0S4 1761 aa15.69■□□□□ 0.1
CCDC84-209ENST00000580556 NFKBIEO00221 500 aa15.68■□□□□ 0.1
CCDC84-209ENST00000580556 TEX13AQ9BXU3 409 aaPredicted RBP15.68■□□□□ 0.1
CCDC84-209ENST00000580556 FOXN1O15353 648 aa15.67■□□□□ 0.1
CCDC84-209ENST00000580556 SNRPA1P09661 255 aaKnown RBP15.67■□□□□ 0.1
CCDC84-209ENST00000580556 POTEIP0CG38 1075 aa15.67■□□□□ 0.1
CCDC84-209ENST00000580556 POTEJP0CG39 1038 aa15.67■□□□□ 0.1
CCDC84-209ENST00000580556 NFIXQ14938 502 aa15.67■□□□□ 0.1
CCDC84-209ENST00000580556 DLEC1Q9Y238 1755 aa15.67■□□□□ 0.1
CCDC84-209ENST00000580556 CARMIL3Q8ND23 1372 aa15.66■□□□□ 0.1
CCDC84-209ENST00000580556 CT47B1P0C2W7 299 aaPredicted RBP15.66■□□□□ 0.1
CCDC84-209ENST00000580556 DNAJC10Q8IXB1 793 aa15.66■□□□□ 0.1
CCDC84-209ENST00000580556 CHMP4AQ9BY43 222 aa15.66■□□□□ 0.1
CCDC84-209ENST00000580556 NRXN2Q9P2S2 1712 aa15.65■□□□□ 0.1
CCDC84-209ENST00000580556 ZPR1O75312 459 aa15.65■□□□□ 0.1
CCDC84-209ENST00000580556 TTLL6Q8N841 843 aa15.65■□□□□ 0.1
CCDC84-209ENST00000580556 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
CCDC84-209ENST00000580556 SLC34A2O95436 690 aa15.64■□□□□ 0.09
CCDC84-209ENST00000580556 SERPINB2P05120 415 aa15.64■□□□□ 0.09
CCDC84-209ENST00000580556 EXOSC9Q06265 439 aaKnown RBP15.64■□□□□ 0.09
CCDC84-209ENST00000580556 C2CD5Q86YS7 1000 aa15.64■□□□□ 0.09
CCDC84-209ENST00000580556 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
CCDC84-209ENST00000580556 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
CCDC84-209ENST00000580556 ZNF219Q9P2Y4 722 aaPredicted RBP15.64■□□□□ 0.09
CCDC84-209ENST00000580556 STARD3NLO95772 234 aa15.63■□□□□ 0.09
CCDC84-209ENST00000580556 KRT24Q2M2I5 525 aa15.63■□□□□ 0.09
CCDC84-209ENST00000580556 TWISTNBQ3B726 338 aaPredicted RBP15.63■□□□□ 0.09
CCDC84-209ENST00000580556 CREBZFQ9NS37 354 aa15.63■□□□□ 0.09
CCDC84-209ENST00000580556 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
CCDC84-209ENST00000580556 NARFQ9UHQ1 456 aa15.62■□□□□ 0.09
CCDC84-209ENST00000580556 CYP19A1P11511 503 aaPredicted RBP15.61■□□□□ 0.09
CCDC84-209ENST00000580556 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
CCDC84-209ENST00000580556 DPY19L2Q6NUT2 758 aa15.61■□□□□ 0.09
CCDC84-209ENST00000580556 CCDC24Q8N4L8 307 aa15.61■□□□□ 0.09
CCDC84-209ENST00000580556 TSPYL6Q8N831 410 aa15.61■□□□□ 0.09
CCDC84-209ENST00000580556 ZBTB1Q9Y2K1 713 aa15.61■□□□□ 0.09
CCDC84-209ENST00000580556 PRAMEF22A3QJZ6 481 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 H0YIN7 160 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 C21orf2O43822 256 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 VAMP4O75379 141 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 DDNO94850 711 aaPredicted RBP15.6■□□□□ 0.09
CCDC84-209ENST00000580556 ERFEQ4G0M1 354 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 HDGFL1Q5TGJ6 251 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 BICDL1Q6ZP65 573 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 USP16Q9Y5T5 823 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 DICER1Q9UPY3 1922 aaKnown RBP15.6■□□□□ 0.09
CCDC84-209ENST00000580556 COL15A1P39059 1388 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 CNTNAP1P78357 1384 aa15.6■□□□□ 0.09
CCDC84-209ENST00000580556 ANKRD31Q8N7Z5 1873 aa15.59■□□□□ 0.09
CCDC84-209ENST00000580556 PRDM10Q9NQV6 1147 aa15.59■□□□□ 0.09
CCDC84-209ENST00000580556 FER1L6Q2WGJ9 1857 aa15.59■□□□□ 0.09
CCDC84-209ENST00000580556 CCDC30Q5VVM6 783 aa15.58■□□□□ 0.08
CCDC84-209ENST00000580556 ZNF622Q969S3 477 aaKnown RBP eCLIP15.58■□□□□ 0.08
CCDC84-209ENST00000580556 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
CCDC84-209ENST00000580556 ELL2O00472 640 aaPredicted RBP15.57■□□□□ 0.08
CCDC84-209ENST00000580556 VEGFBP49765 207 aa15.57■□□□□ 0.08
CCDC84-209ENST00000580556 CANXP27824 592 aaKnown RBP15.56■□□□□ 0.08
CCDC84-209ENST00000580556 CTCFP49711 727 aaPredicted RBP15.56■□□□□ 0.08
CCDC84-209ENST00000580556 LBX1P52954 281 aa15.56■□□□□ 0.08
CCDC84-209ENST00000580556 FAM161AQ3B820 660 aa15.56■□□□□ 0.08
CCDC84-209ENST00000580556 ALDH1L2Q3SY69 923 aa15.56■□□□□ 0.08
CCDC84-209ENST00000580556 DBF4Q9UBU7 674 aaPredicted RBP15.56■□□□□ 0.08
CCDC84-209ENST00000580556 PASKQ96RG2 1323 aa15.56■□□□□ 0.08
CCDC84-209ENST00000580556 EIF2S2P20042 333 aaKnown RBP15.55■□□□□ 0.08
CCDC84-209ENST00000580556 IL6STP40189 918 aaPredicted RBP15.55■□□□□ 0.08
CCDC84-209ENST00000580556 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
CCDC84-209ENST00000580556 STK31Q9BXU1 1019 aa15.55■□□□□ 0.08
CCDC84-209ENST00000580556 DDX21Q9NR30 783 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCDC84-209ENST00000580556 CACNA1SQ13698 1873 aa15.54■□□□□ 0.08
CCDC84-209ENST00000580556 NBPF26B4DH59 902 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms