RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 GORABQ5T7V8 394 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 NFATC2IPQ8NCF5 419 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 ZNF592Q92610 1267 aa16.34■□□□□ 0.21
NDEL1-204ENST00000578172 HSP90AB3PQ58FF7 597 aa16.33■□□□□ 0.21
NDEL1-204ENST00000578172 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.21
NDEL1-204ENST00000578172 GLRX3O76003 335 aaKnown RBP16.33■□□□□ 0.2
NDEL1-204ENST00000578172 NMIQ13287 307 aaPredicted RBP16.33■□□□□ 0.2
NDEL1-204ENST00000578172 ECHDC1Q9NTX5 307 aa16.33■□□□□ 0.2
NDEL1-204ENST00000578172 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.2
NDEL1-204ENST00000578172 CDK11BP21127 795 aaKnown RBP16.33■□□□□ 0.2
NDEL1-204ENST00000578172 COPS6Q7L5N1 327 aa16.33■□□□□ 0.2
NDEL1-204ENST00000578172 FAM184AQ8NB25 1140 aa16.33■□□□□ 0.2
NDEL1-204ENST00000578172 SNRKQ9NRH2 765 aa16.33■□□□□ 0.2
NDEL1-204ENST00000578172 RBM8AQ9Y5S9 174 aaKnown RBP16.33■□□□□ 0.2
NDEL1-204ENST00000578172 SBNO1A3KN83 1393 aa16.33■□□□□ 0.2
NDEL1-204ENST00000578172 EIF4A1P60842 406 aaKnown RBP16.32■□□□□ 0.2
NDEL1-204ENST00000578172 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.32■□□□□ 0.2
NDEL1-204ENST00000578172 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
NDEL1-204ENST00000578172 IFT172Q9UG01 1749 aa16.32■□□□□ 0.2
NDEL1-204ENST00000578172 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
NDEL1-204ENST00000578172 XAGE3Q8WTP9 111 aa16.32■□□□□ 0.2
NDEL1-204ENST00000578172 DBF4Q9UBU7 674 aaPredicted RBP16.32■□□□□ 0.2
NDEL1-204ENST00000578172 ISY1Q9ULR0 285 aaKnown RBP16.32■□□□□ 0.2
NDEL1-204ENST00000578172 A0A087WWV3 80 aa16.32■□□□□ 0.2
NDEL1-204ENST00000578172 ADCY5O95622 1261 aa16.32■□□□□ 0.2
NDEL1-204ENST00000578172 PHF14O94880 888 aa16.31■□□□□ 0.2
NDEL1-204ENST00000578172 SUCLG2Q96I99 432 aa16.31■□□□□ 0.2
NDEL1-204ENST00000578172 SGSM2O43147 1006 aa16.31■□□□□ 0.2
NDEL1-204ENST00000578172 BRD1O95696 1058 aa16.31■□□□□ 0.2
NDEL1-204ENST00000578172 DDX58O95786 925 aaKnown RBP16.31■□□□□ 0.2
NDEL1-204ENST00000578172 COL9A3Q14050 684 aaPredicted RBP16.31■□□□□ 0.2
NDEL1-204ENST00000578172 BLOC1S2Q6QNY1 142 aa16.31■□□□□ 0.2
NDEL1-204ENST00000578172 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
NDEL1-204ENST00000578172 KIAA0232Q92628 1395 aa16.31■□□□□ 0.2
NDEL1-204ENST00000578172 SEC62Q99442 399 aaKnown RBP16.31■□□□□ 0.2
NDEL1-204ENST00000578172 IBTKQ9P2D0 1353 aaPredicted RBP16.3■□□□□ 0.2
NDEL1-204ENST00000578172 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
NDEL1-204ENST00000578172 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
NDEL1-204ENST00000578172 FMNL2Q96PY5 1086 aa16.3■□□□□ 0.2
NDEL1-204ENST00000578172 IGSF1Q8N6C5 1336 aa16.3■□□□□ 0.2
NDEL1-204ENST00000578172 GCP02774 474 aa16.3■□□□□ 0.2
NDEL1-204ENST00000578172 ZSCAN22P10073 491 aaPredicted RBP16.3■□□□□ 0.2
NDEL1-204ENST00000578172 CCDC39Q9UFE4 941 aa16.3■□□□□ 0.2
NDEL1-204ENST00000578172 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
NDEL1-204ENST00000578172 TTC21AQ8NDW8 1320 aa16.29■□□□□ 0.2
NDEL1-204ENST00000578172 ZBTB3Q9H5J0 574 aa16.29■□□□□ 0.2
NDEL1-204ENST00000578172 EAF2Q96CJ1 260 aaPredicted RBP16.29■□□□□ 0.2
NDEL1-204ENST00000578172 STRN4Q9NRL3 753 aa16.29■□□□□ 0.2
NDEL1-204ENST00000578172 CRB1P82279 1406 aa16.29■□□□□ 0.2
NDEL1-204ENST00000578172 ZNF445P59923 1031 aa16.28■□□□□ 0.2
NDEL1-204ENST00000578172 TAF6LQ9Y6J9 622 aa16.28■□□□□ 0.2
NDEL1-204ENST00000578172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.28■□□□□ 0.2
NDEL1-204ENST00000578172 FKBP4Q02790 459 aaKnown RBP eCLIP16.28■□□□□ 0.2
NDEL1-204ENST00000578172 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
NDEL1-204ENST00000578172 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.28■□□□□ 0.2
NDEL1-204ENST00000578172 CLTCQ00610 1675 aaKnown RBP16.28■□□□□ 0.2
NDEL1-204ENST00000578172 HAND2P61296 217 aa16.28■□□□□ 0.2
NDEL1-204ENST00000578172 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
NDEL1-204ENST00000578172 SYTL4Q96C24 671 aaPredicted RBP16.28■□□□□ 0.2
NDEL1-204ENST00000578172 HSPA4P34932 840 aa16.27■□□□□ 0.2
NDEL1-204ENST00000578172 TAF7LQ5H9L4 462 aa16.27■□□□□ 0.2
NDEL1-204ENST00000578172 NPHP1O15259 732 aa16.27■□□□□ 0.2
NDEL1-204ENST00000578172 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
NDEL1-204ENST00000578172 RGS12O14924 1447 aa16.27■□□□□ 0.2
NDEL1-204ENST00000578172 PREX1Q8TCU6 1659 aa16.27■□□□□ 0.2
NDEL1-204ENST00000578172 A0A087WZG4 1122 aa16.27■□□□□ 0.19
NDEL1-204ENST00000578172 A0A0D9SFI3 127 aa16.27■□□□□ 0.19
NDEL1-204ENST00000578172 GRM8O00222 908 aa16.27■□□□□ 0.19
NDEL1-204ENST00000578172 PPP6R1Q9UPN7 881 aa16.27■□□□□ 0.19
NDEL1-204ENST00000578172 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.19
NDEL1-204ENST00000578172 JAK2O60674 1132 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 CHAF1AQ13111 956 aaPredicted RBP16.26■□□□□ 0.19
NDEL1-204ENST00000578172 ME3Q16798 604 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 ANKLE2Q86XL3 938 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 PI4K2BQ8TCG2 481 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 CFAP74Q9C0B2 1584 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 F13A1P00488 732 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 TRIM5Q9C035 493 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 NCOA3Q9Y6Q9 1424 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
NDEL1-204ENST00000578172 CDC37L1Q7L3B6 337 aa16.26■□□□□ 0.19
NDEL1-204ENST00000578172 GOLIM4O00461 696 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 CREB3L3Q68CJ9 461 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 IP6K1Q92551 441 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 ZKSCAN5Q9Y2L8 839 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 AXIN2Q9Y2T1 843 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 USP16Q9Y5T5 823 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 RAD50Q92878 1312 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
NDEL1-204ENST00000578172 TIMM10P62072 90 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 KSR2Q6VAB6 950 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
NDEL1-204ENST00000578172 CCDC183Q5T5S1 534 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 SPATA32Q96LK8 384 aa16.25■□□□□ 0.19
NDEL1-204ENST00000578172 ZHX1Q9UKY1 873 aaPredicted RBP16.25■□□□□ 0.19
NDEL1-204ENST00000578172 RNF20Q5VTR2 975 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 ISM2Q6H9L7 571 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
NDEL1-204ENST00000578172 LUZP1Q86V48 1076 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms