RNA–Protein interactions for RNA: ENST00000577958.1

UBB-206, Transcript of ubiquitin B, humanhuman

TSL 2

Gene UBB, Length 376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-206ENST00000577958 CCDC88AQ3V6T2 1871 aa20.26■□□□□ 0.83
UBB-206ENST00000577958 NPHP1O15259 732 aa20.25■□□□□ 0.83
UBB-206ENST00000577958 ZNF622Q969S3 477 aaKnown RBP eCLIP20.25■□□□□ 0.83
UBB-206ENST00000577958 TNRC6CQ9HCJ0 1690 aaKnown RBP20.25■□□□□ 0.83
UBB-206ENST00000577958 FER1L6Q2WGJ9 1857 aa20.24■□□□□ 0.83
UBB-206ENST00000577958 ARFGEF2Q9Y6D5 1785 aa20.24■□□□□ 0.83
UBB-206ENST00000577958 NFKBIEO00221 500 aa20.24■□□□□ 0.83
UBB-206ENST00000577958 SRGNP10124 158 aa20.24■□□□□ 0.83
UBB-206ENST00000577958 PRELPP51888 382 aa20.24■□□□□ 0.83
UBB-206ENST00000577958 DDX10Q13206 875 aaKnown RBP20.24■□□□□ 0.83
UBB-206ENST00000577958 STYK1Q6J9G0 422 aa20.24■□□□□ 0.83
UBB-206ENST00000577958 NBPF5PQ86XG9 351 aaPredicted RBP20.24■□□□□ 0.83
UBB-206ENST00000577958 THUMPD2Q9BTF0 503 aaKnown RBP20.24■□□□□ 0.83
UBB-206ENST00000577958 MYBBP1AQ9BQG0 1328 aaKnown RBP20.24■□□□□ 0.83
UBB-206ENST00000577958 CNKSR1Q969H4 720 aa20.23■□□□□ 0.83
UBB-206ENST00000577958 MASTLQ96GX5 879 aa20.23■□□□□ 0.83
UBB-206ENST00000577958 NIP7Q9Y221 180 aaKnown RBP eCLIP20.23■□□□□ 0.83
UBB-206ENST00000577958 KLRG2A4D1S0 409 aaPredicted RBP20.22■□□□□ 0.83
UBB-206ENST00000577958 TPTE2Q6XPS3 522 aa20.22■□□□□ 0.83
UBB-206ENST00000577958 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
UBB-206ENST00000577958 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
UBB-206ENST00000577958 SLX4Q8IY92 1834 aa20.22■□□□□ 0.83
UBB-206ENST00000577958 DICER1Q9UPY3 1922 aaKnown RBP20.21■□□□□ 0.83
UBB-206ENST00000577958 ERVV-1B6SEH8 477 aa20.21■□□□□ 0.83
UBB-206ENST00000577958 C21orf2O43822 256 aa20.21■□□□□ 0.83
UBB-206ENST00000577958 RIPK4P57078 832 aa20.21■□□□□ 0.83
UBB-206ENST00000577958 HLFQ16534 295 aa20.21■□□□□ 0.83
UBB-206ENST00000577958 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
UBB-206ENST00000577958 LTBP3Q9NS15 1303 aa20.21■□□□□ 0.83
UBB-206ENST00000577958 NUP98P52948 1817 aa20.2■□□□□ 0.82
UBB-206ENST00000577958 ERBB4Q15303 1308 aa20.2■□□□□ 0.82
UBB-206ENST00000577958 CACNA1SQ13698 1873 aa20.2■□□□□ 0.82
UBB-206ENST00000577958 GLTPD2A6NH11 291 aa20.19■□□□□ 0.82
UBB-206ENST00000577958 TMPOP42166 694 aaKnown RBP20.19■□□□□ 0.82
UBB-206ENST00000577958 LMOD3Q0VAK6 560 aa20.19■□□□□ 0.82
UBB-206ENST00000577958 SOGA3Q5TF21 947 aa20.19■□□□□ 0.82
UBB-206ENST00000577958 PRPF40BQ6NWY9 871 aaKnown RBP20.19■□□□□ 0.82
UBB-206ENST00000577958 C16orf71Q8IYS4 520 aaPredicted RBP20.19■□□□□ 0.82
UBB-206ENST00000577958 RRAGCQ9HB90 399 aa20.19■□□□□ 0.82
UBB-206ENST00000577958 APLP1P51693 650 aa20.18■□□□□ 0.82
UBB-206ENST00000577958 FSTL1Q12841 308 aa20.18■□□□□ 0.82
UBB-206ENST00000577958 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
UBB-206ENST00000577958 MAP3K15Q6ZN16 1313 aa20.18■□□□□ 0.82
UBB-206ENST00000577958 NPR1P16066 1061 aa20.17■□□□□ 0.82
UBB-206ENST00000577958 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
UBB-206ENST00000577958 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
UBB-206ENST00000577958 C7orf43Q8WVR3 580 aa20.16■□□□□ 0.82
UBB-206ENST00000577958 TAOK3Q9H2K8 898 aa20.16■□□□□ 0.82
UBB-206ENST00000577958 ZNF219Q9P2Y4 722 aaPredicted RBP20.16■□□□□ 0.82
UBB-206ENST00000577958 MYL6BP14649 208 aa20.15■□□□□ 0.82
UBB-206ENST00000577958 TTLL7Q6ZT98 887 aa20.15■□□□□ 0.82
UBB-206ENST00000577958 NGEFQ8N5V2 710 aa20.15■□□□□ 0.82
UBB-206ENST00000577958 NYXQ9GZU5 481 aa20.15■□□□□ 0.82
UBB-206ENST00000577958 IBTKQ9P2D0 1353 aaPredicted RBP20.15■□□□□ 0.82
UBB-206ENST00000577958 VEGFAP15692 232 aaPredicted RBP20.14■□□□□ 0.81
UBB-206ENST00000577958 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
UBB-206ENST00000577958 WDR90Q96KV7 1748 aa20.13■□□□□ 0.81
UBB-206ENST00000577958 RIC1Q4ADV7 1423 aa20.13■□□□□ 0.81
UBB-206ENST00000577958 FAM177BA6PVY3 158 aa20.13■□□□□ 0.81
UBB-206ENST00000577958 PDIA6Q15084 440 aa20.13■□□□□ 0.81
UBB-206ENST00000577958 DPY19L2Q6NUT2 758 aa20.13■□□□□ 0.81
UBB-206ENST00000577958 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
UBB-206ENST00000577958 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
UBB-206ENST00000577958 GTF2E1P29083 439 aaPredicted RBP20.12■□□□□ 0.81
UBB-206ENST00000577958 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
UBB-206ENST00000577958 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
UBB-206ENST00000577958 CRY2Q49AN0 593 aa20.12■□□□□ 0.81
UBB-206ENST00000577958 CCDC93Q567U6 631 aa20.12■□□□□ 0.81
UBB-206ENST00000577958 GIGYF2Q6Y7W6 1299 aaKnown RBP20.12■□□□□ 0.81
UBB-206ENST00000577958 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
UBB-206ENST00000577958 ZNF34Q8IZ26 560 aa20.11■□□□□ 0.81
UBB-206ENST00000577958 SMC1BQ8NDV3 1235 aa20.11■□□□□ 0.81
UBB-206ENST00000577958 ZBTB3Q9H5J0 574 aa20.11■□□□□ 0.81
UBB-206ENST00000577958 PRKRIP1Q9H875 184 aaPredicted RBP20.11■□□□□ 0.81
UBB-206ENST00000577958 ABCC12Q96J65 1359 aa20.1■□□□□ 0.81
UBB-206ENST00000577958 UBN2Q6ZU65 1347 aa20.1■□□□□ 0.81
UBB-206ENST00000577958 CHL1O00533 1208 aa20.1■□□□□ 0.81
UBB-206ENST00000577958 DNAJC5GQ8N7S2 189 aa20.1■□□□□ 0.81
UBB-206ENST00000577958 TRIM35Q9UPQ4 493 aa20.1■□□□□ 0.81
UBB-206ENST00000577958 POTECB2RU33 542 aa20.09■□□□□ 0.81
UBB-206ENST00000577958 EIF2S2P20042 333 aaKnown RBP20.09■□□□□ 0.81
UBB-206ENST00000577958 NUTM1Q86Y26 1132 aa20.09■□□□□ 0.81
UBB-206ENST00000577958 RTKN2Q8IZC4 609 aa20.09■□□□□ 0.81
UBB-206ENST00000577958 ADAMTS8Q9UP79 889 aa20.09■□□□□ 0.81
UBB-206ENST00000577958 GPTP24298 496 aa20.08■□□□□ 0.81
UBB-206ENST00000577958 FKBP4Q02790 459 aaKnown RBP eCLIP20.08■□□□□ 0.81
UBB-206ENST00000577958 NEUROD2Q15784 382 aa20.08■□□□□ 0.81
UBB-206ENST00000577958 SUSD4Q5VX71 490 aa20.08■□□□□ 0.81
UBB-206ENST00000577958 PARP10Q53GL7 1025 aa20.07■□□□□ 0.8
UBB-206ENST00000577958 NTSR2O95665 410 aa20.06■□□□□ 0.8
UBB-206ENST00000577958 HOXA10P31260 410 aaPredicted RBP20.06■□□□□ 0.8
UBB-206ENST00000577958 PROSER3Q2NL68 480 aa20.06■□□□□ 0.8
UBB-206ENST00000577958 PPP1R42Q7Z4L9 355 aa20.06■□□□□ 0.8
UBB-206ENST00000577958 SNED1Q8TER0 1413 aa20.06■□□□□ 0.8
UBB-206ENST00000577958 PCNTO95613 3336 aa20.06■□□□□ 0.8
UBB-206ENST00000577958 DDX21Q9NR30 783 aaKnown RBP eCLIP20.05■□□□□ 0.8
UBB-206ENST00000577958 ANKRD36CQ5JPF3 1778 aa20.04■□□□□ 0.8
UBB-206ENST00000577958 HOXB7P09629 217 aa20.04■□□□□ 0.8
UBB-206ENST00000577958 CC2D2BQ6DHV5 1058 aa20.04■□□□□ 0.8
UBB-206ENST00000577958 OLFM4Q6UX06 510 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms