RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 SETDB2Q96T68 719 aa16.67■□□□□ 0.26
SSH2-205ENST00000577483 CLEC4GQ6UXB4 293 aa16.66■□□□□ 0.26
SSH2-205ENST00000577483 HLFQ16534 295 aa16.65■□□□□ 0.26
SSH2-205ENST00000577483 CNBD1Q8NA66 436 aa16.65■□□□□ 0.26
SSH2-205ENST00000577483 ZNF526Q8TF50 670 aaPredicted RBP16.65■□□□□ 0.26
SSH2-205ENST00000577483 LAMB2P55268 1798 aa16.65■□□□□ 0.26
SSH2-205ENST00000577483 CCDC184Q52MB2 194 aa16.64■□□□□ 0.25
SSH2-205ENST00000577483 NGEFQ8N5V2 710 aa16.64■□□□□ 0.25
SSH2-205ENST00000577483 BRIP1Q9BX63 1249 aa16.64■□□□□ 0.25
SSH2-205ENST00000577483 BABAM1Q9NWV8 329 aa16.64■□□□□ 0.25
SSH2-205ENST00000577483 ZNF652Q9Y2D9 606 aa16.64■□□□□ 0.25
SSH2-205ENST00000577483 H0YIN7 160 aa16.63■□□□□ 0.25
SSH2-205ENST00000577483 MYL6BP14649 208 aa16.63■□□□□ 0.25
SSH2-205ENST00000577483 RGL2O15211 777 aa16.63■□□□□ 0.25
SSH2-205ENST00000577483 KRT24Q2M2I5 525 aa16.63■□□□□ 0.25
SSH2-205ENST00000577483 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
SSH2-205ENST00000577483 LRP10Q7Z4F1 713 aa16.63■□□□□ 0.25
SSH2-205ENST00000577483 GPBP1L1Q9HC44 474 aaPredicted RBP16.63■□□□□ 0.25
SSH2-205ENST00000577483 NIP7Q9Y221 180 aaKnown RBP eCLIP16.63■□□□□ 0.25
SSH2-205ENST00000577483 ZNF316A6NFI3 1004 aaPredicted RBP16.62■□□□□ 0.25
SSH2-205ENST00000577483 PDE6BP35913 854 aa16.62■□□□□ 0.25
SSH2-205ENST00000577483 C1QTNF8P60827 252 aa16.62■□□□□ 0.25
SSH2-205ENST00000577483 TTLL6Q8N841 843 aa16.62■□□□□ 0.25
SSH2-205ENST00000577483 ERBB4Q15303 1308 aa16.62■□□□□ 0.25
SSH2-205ENST00000577483 MAP3K15Q6ZN16 1313 aa16.62■□□□□ 0.25
SSH2-205ENST00000577483 CHL1O00533 1208 aa16.61■□□□□ 0.25
SSH2-205ENST00000577483 ST5P78524 1137 aa16.61■□□□□ 0.25
SSH2-205ENST00000577483 RASSF7Q02833 373 aa16.61■□□□□ 0.25
SSH2-205ENST00000577483 PDIA6Q15084 440 aa16.61■□□□□ 0.25
SSH2-205ENST00000577483 NBPF5PQ86XG9 351 aaPredicted RBP16.61■□□□□ 0.25
SSH2-205ENST00000577483 NPHP1O15259 732 aa16.6■□□□□ 0.25
SSH2-205ENST00000577483 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
SSH2-205ENST00000577483 PROSER3Q2NL68 480 aa16.6■□□□□ 0.25
SSH2-205ENST00000577483 C9orf131Q5VYM1 1079 aa16.6■□□□□ 0.25
SSH2-205ENST00000577483 ZNF622Q969S3 477 aaKnown RBP eCLIP16.6■□□□□ 0.25
SSH2-205ENST00000577483 LAS1LQ9Y4W2 734 aaKnown RBP16.6■□□□□ 0.25
SSH2-205ENST00000577483 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 APAF1O14727 1248 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 ANXA1P04083 346 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 PRELPP51888 382 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 ZBTB3Q9H5J0 574 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 ABCC12Q96J65 1359 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 UBN2Q6ZU65 1347 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 SRGNP10124 158 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 KIF6Q6ZMV9 814 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 PDZRN3Q9UPQ7 1066 aa16.59■□□□□ 0.25
SSH2-205ENST00000577483 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
SSH2-205ENST00000577483 RNF181Q9P0P0 153 aa16.58■□□□□ 0.24
SSH2-205ENST00000577483 DDX60Q8IY21 1712 aaKnown RBP16.57■□□□□ 0.24
SSH2-205ENST00000577483 TAF1P21675 1872 aa16.57■□□□□ 0.24
SSH2-205ENST00000577483 NFKBIEO00221 500 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 KIF3CO14782 793 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 TPTE2Q6XPS3 522 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 CFAP44Q96MT7 982 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 C21orf2O43822 256 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 GPTP24298 496 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 STYK1Q6J9G0 422 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 GIGYF2Q6Y7W6 1299 aaKnown RBP16.56■□□□□ 0.24
SSH2-205ENST00000577483 NUTM1Q86Y26 1132 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 MASTLQ96GX5 879 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
SSH2-205ENST00000577483 ZNF219Q9P2Y4 722 aaPredicted RBP16.56■□□□□ 0.24
SSH2-205ENST00000577483 IBTKQ9P2D0 1353 aaPredicted RBP16.55■□□□□ 0.24
SSH2-205ENST00000577483 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
SSH2-205ENST00000577483 ZNF853P0CG23 659 aa16.55■□□□□ 0.24
SSH2-205ENST00000577483 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
SSH2-205ENST00000577483 ZNF34Q8IZ26 560 aa16.55■□□□□ 0.24
SSH2-205ENST00000577483 RIC1Q4ADV7 1423 aa16.54■□□□□ 0.24
SSH2-205ENST00000577483 CNKSR1Q969H4 720 aa16.54■□□□□ 0.24
SSH2-205ENST00000577483 SENP3-EIF4A1A0A087X0R7 540 aa16.53■□□□□ 0.24
SSH2-205ENST00000577483 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
SSH2-205ENST00000577483 SUSD4Q5VX71 490 aa16.53■□□□□ 0.24
SSH2-205ENST00000577483 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
SSH2-205ENST00000577483 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
SSH2-205ENST00000577483 NTSR2O95665 410 aa16.52■□□□□ 0.24
SSH2-205ENST00000577483 LMNB1P20700 586 aa16.52■□□□□ 0.24
SSH2-205ENST00000577483 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
SSH2-205ENST00000577483 NYXQ9GZU5 481 aa16.52■□□□□ 0.24
SSH2-205ENST00000577483 DDX21Q9NR30 783 aaKnown RBP eCLIP16.52■□□□□ 0.24
SSH2-205ENST00000577483 WDR90Q96KV7 1748 aa16.52■□□□□ 0.24
SSH2-205ENST00000577483 HOXB7P09629 217 aa16.52■□□□□ 0.23
SSH2-205ENST00000577483 NPR1P16066 1061 aa16.52■□□□□ 0.23
SSH2-205ENST00000577483 HDGFL1Q5TGJ6 251 aa16.52■□□□□ 0.23
SSH2-205ENST00000577483 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.23
SSH2-205ENST00000577483 ANP32CO43423 234 aa16.51■□□□□ 0.23
SSH2-205ENST00000577483 GTF2E1P29083 439 aaPredicted RBP16.51■□□□□ 0.23
SSH2-205ENST00000577483 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
SSH2-205ENST00000577483 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
SSH2-205ENST00000577483 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
SSH2-205ENST00000577483 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
SSH2-205ENST00000577483 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
SSH2-205ENST00000577483 CEP350Q5VT06 3117 aa16.5■□□□□ 0.23
SSH2-205ENST00000577483 CRY2Q49AN0 593 aa16.5■□□□□ 0.23
SSH2-205ENST00000577483 C7orf43Q8WVR3 580 aa16.5■□□□□ 0.23
SSH2-205ENST00000577483 LTBP3Q9NS15 1303 aa16.5■□□□□ 0.23
SSH2-205ENST00000577483 ZC3H4Q9UPT8 1303 aaKnown RBP16.5■□□□□ 0.23
SSH2-205ENST00000577483 OLFM4Q6UX06 510 aa16.49■□□□□ 0.23
SSH2-205ENST00000577483 CACNA1FO60840 1977 aa16.49■□□□□ 0.23
SSH2-205ENST00000577483 GNAI1P63096 354 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms