RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 C9orf131Q5VYM1 1079 aa15.66■□□□□ 0.1
LITAF-219ENST00000576334 TTLL7Q6ZT98 887 aa15.66■□□□□ 0.1
LITAF-219ENST00000576334 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
LITAF-219ENST00000576334 CACNA1SQ13698 1873 aa15.65■□□□□ 0.1
LITAF-219ENST00000576334 H0YIN7 160 aa15.65■□□□□ 0.1
LITAF-219ENST00000576334 ANXA1P04083 346 aa15.65■□□□□ 0.1
LITAF-219ENST00000576334 CNBD1Q8NA66 436 aa15.65■□□□□ 0.1
LITAF-219ENST00000576334 ZNF622Q969S3 477 aaKnown RBP eCLIP15.65■□□□□ 0.1
LITAF-219ENST00000576334 CEP350Q5VT06 3117 aa15.65■□□□□ 0.1
LITAF-219ENST00000576334 TTLL6Q8N841 843 aa15.64■□□□□ 0.09
LITAF-219ENST00000576334 NECTIN2Q92692 538 aa15.64■□□□□ 0.09
LITAF-219ENST00000576334 RUNDC1Q96C34 613 aa15.64■□□□□ 0.09
LITAF-219ENST00000576334 BRIP1Q9BX63 1249 aa15.64■□□□□ 0.09
LITAF-219ENST00000576334 NIP7Q9Y221 180 aaKnown RBP eCLIP15.64■□□□□ 0.09
LITAF-219ENST00000576334 LAS1LQ9Y4W2 734 aaKnown RBP15.64■□□□□ 0.09
LITAF-219ENST00000576334 NPHP1O15259 732 aa15.63■□□□□ 0.09
LITAF-219ENST00000576334 EIF2S2P20042 333 aaKnown RBP15.63■□□□□ 0.09
LITAF-219ENST00000576334 PROSER3Q2NL68 480 aa15.63■□□□□ 0.09
LITAF-219ENST00000576334 NBPF5PQ86XG9 351 aaPredicted RBP15.63■□□□□ 0.09
LITAF-219ENST00000576334 ZBTB3Q9H5J0 574 aa15.63■□□□□ 0.09
LITAF-219ENST00000576334 RNF181Q9P0P0 153 aa15.63■□□□□ 0.09
LITAF-219ENST00000576334 NUP98P52948 1817 aa15.63■□□□□ 0.09
LITAF-219ENST00000576334 SLX4Q8IY92 1834 aa15.62■□□□□ 0.09
LITAF-219ENST00000576334 CLEC4GQ6UXB4 293 aa15.62■□□□□ 0.09
LITAF-219ENST00000576334 CCDC88AQ3V6T2 1871 aa15.62■□□□□ 0.09
LITAF-219ENST00000576334 NFKBIEO00221 500 aa15.61■□□□□ 0.09
LITAF-219ENST00000576334 KIF3CO14782 793 aa15.61■□□□□ 0.09
LITAF-219ENST00000576334 C21orf2O43822 256 aa15.61■□□□□ 0.09
LITAF-219ENST00000576334 PDE6BP35913 854 aa15.61■□□□□ 0.09
LITAF-219ENST00000576334 PDIA6Q15084 440 aa15.61■□□□□ 0.09
LITAF-219ENST00000576334 NMRK2Q9NPI5 230 aa15.61■□□□□ 0.09
LITAF-219ENST00000576334 ZNF652Q9Y2D9 606 aa15.61■□□□□ 0.09
LITAF-219ENST00000576334 APAF1O14727 1248 aa15.6■□□□□ 0.09
LITAF-219ENST00000576334 GPTP24298 496 aa15.6■□□□□ 0.09
LITAF-219ENST00000576334 ST5P78524 1137 aa15.6■□□□□ 0.09
LITAF-219ENST00000576334 LRP10Q7Z4F1 713 aa15.6■□□□□ 0.09
LITAF-219ENST00000576334 MAP3K15Q6ZN16 1313 aa15.6■□□□□ 0.09
LITAF-219ENST00000576334 TNRC6CQ9HCJ0 1690 aaKnown RBP15.6■□□□□ 0.09
LITAF-219ENST00000576334 CHL1O00533 1208 aa15.59■□□□□ 0.09
LITAF-219ENST00000576334 SRGNP10124 158 aa15.59■□□□□ 0.09
LITAF-219ENST00000576334 LMOD3Q0VAK6 560 aa15.59■□□□□ 0.09
LITAF-219ENST00000576334 NUTM1Q86Y26 1132 aa15.59■□□□□ 0.09
LITAF-219ENST00000576334 UBN2Q6ZU65 1347 aa15.59■□□□□ 0.09
LITAF-219ENST00000576334 ZEB1P37275 1124 aaPredicted RBP15.58■□□□□ 0.08
LITAF-219ENST00000576334 OLFM4Q6UX06 510 aa15.58■□□□□ 0.08
LITAF-219ENST00000576334 ZNF428Q96B54 188 aa15.58■□□□□ 0.08
LITAF-219ENST00000576334 ABCC12Q96J65 1359 aa15.58■□□□□ 0.08
LITAF-219ENST00000576334 PRPF40BQ6NWY9 871 aaKnown RBP15.57■□□□□ 0.08
LITAF-219ENST00000576334 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
LITAF-219ENST00000576334 KIF6Q6ZMV9 814 aa15.57■□□□□ 0.08
LITAF-219ENST00000576334 SLC51AQ86UW1 340 aa15.57■□□□□ 0.08
LITAF-219ENST00000576334 FER1L6Q2WGJ9 1857 aa15.57■□□□□ 0.08
LITAF-219ENST00000576334 ERVV-1B6SEH8 477 aa15.56■□□□□ 0.08
LITAF-219ENST00000576334 AIMP1Q12904 312 aaKnown RBP15.56■□□□□ 0.08
LITAF-219ENST00000576334 ERFEQ4G0M1 354 aa15.56■□□□□ 0.08
LITAF-219ENST00000576334 SUSD4Q5VX71 490 aa15.56■□□□□ 0.08
LITAF-219ENST00000576334 MASTLQ96GX5 879 aa15.56■□□□□ 0.08
LITAF-219ENST00000576334 ARFGEF2Q9Y6D5 1785 aa15.55■□□□□ 0.08
LITAF-219ENST00000576334 TIAM2Q8IVF5 1701 aa15.55■□□□□ 0.08
LITAF-219ENST00000576334 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
LITAF-219ENST00000576334 STYK1Q6J9G0 422 aa15.55■□□□□ 0.08
LITAF-219ENST00000576334 BABAM1Q9NWV8 329 aa15.55■□□□□ 0.08
LITAF-219ENST00000576334 ERBB4Q15303 1308 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 KLRG2A4D1S0 409 aaPredicted RBP15.54■□□□□ 0.08
LITAF-219ENST00000576334 LMNB1P20700 586 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 GTF2E1P29083 439 aaPredicted RBP15.54■□□□□ 0.08
LITAF-219ENST00000576334 GIGYF2Q6Y7W6 1299 aaKnown RBP15.54■□□□□ 0.08
LITAF-219ENST00000576334 C3orf67Q6ZVT6 689 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 COPS6Q7L5N1 327 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 ZNF34Q8IZ26 560 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 XAGE3Q8WTP9 111 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 RRAGCQ9HB90 399 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 MBIPQ9NS73 344 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 CHPF2Q9P2E5 772 aa15.54■□□□□ 0.08
LITAF-219ENST00000576334 RGL2O15211 777 aa15.53■□□□□ 0.08
LITAF-219ENST00000576334 NPR1P16066 1061 aa15.53■□□□□ 0.08
LITAF-219ENST00000576334 C7orf43Q8WVR3 580 aa15.53■□□□□ 0.08
LITAF-219ENST00000576334 CNKSR1Q969H4 720 aa15.53■□□□□ 0.08
LITAF-219ENST00000576334 PDZRN3Q9UPQ7 1066 aa15.53■□□□□ 0.08
LITAF-219ENST00000576334 ELL2O00472 640 aaPredicted RBP15.52■□□□□ 0.08
LITAF-219ENST00000576334 NTSR2O95665 410 aa15.52■□□□□ 0.08
LITAF-219ENST00000576334 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
LITAF-219ENST00000576334 CFAP44Q96MT7 982 aa15.52■□□□□ 0.08
LITAF-219ENST00000576334 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
LITAF-219ENST00000576334 HDGFL1Q5TGJ6 251 aa15.51■□□□□ 0.07
LITAF-219ENST00000576334 DUSP27Q5VZP5 1158 aa15.51■□□□□ 0.07
LITAF-219ENST00000576334 DDX21Q9NR30 783 aaKnown RBP eCLIP15.51■□□□□ 0.07
LITAF-219ENST00000576334 NYXQ9GZU5 481 aa15.5■□□□□ 0.07
LITAF-219ENST00000576334 DICER1Q9UPY3 1922 aaKnown RBP15.5■□□□□ 0.07
LITAF-219ENST00000576334 ANKRD36CQ5JPF3 1778 aa15.49■□□□□ 0.07
LITAF-219ENST00000576334 TCERG1O14776 1098 aaKnown RBP15.49■□□□□ 0.07
LITAF-219ENST00000576334 CRY2Q49AN0 593 aa15.49■□□□□ 0.07
LITAF-219ENST00000576334 TAOK3Q9H2K8 898 aa15.49■□□□□ 0.07
LITAF-219ENST00000576334 KDM2BQ8NHM5 1336 aa15.48■□□□□ 0.07
LITAF-219ENST00000576334 GLTPD2A6NH11 291 aa15.48■□□□□ 0.07
LITAF-219ENST00000576334 POTECB2RU33 542 aa15.48■□□□□ 0.07
LITAF-219ENST00000576334 TOMM70O94826 608 aa15.48■□□□□ 0.07
LITAF-219ENST00000576334 HSPA6P17066 643 aa15.48■□□□□ 0.07
LITAF-219ENST00000576334 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
LITAF-219ENST00000576334 MRS2Q9HD23 443 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms