RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 COPS6Q7L5N1 327 aa20.17■□□□□ 0.82
LITAF-218ENST00000576036 YTHDC1Q96MU7 727 aaKnown RBP20.17■□□□□ 0.82
LITAF-218ENST00000576036 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
LITAF-218ENST00000576036 HLFQ16534 295 aa20.16■□□□□ 0.82
LITAF-218ENST00000576036 HYPKQ9NX55 129 aa20.16■□□□□ 0.82
LITAF-218ENST00000576036 MAP3K15Q6ZN16 1313 aa20.16■□□□□ 0.82
LITAF-218ENST00000576036 ZPR1O75312 459 aa20.15■□□□□ 0.82
LITAF-218ENST00000576036 TM4SF1P30408 202 aa20.14■□□□□ 0.81
LITAF-218ENST00000576036 DDR1Q08345 913 aa20.14■□□□□ 0.81
LITAF-218ENST00000576036 AIMP1Q12904 312 aaKnown RBP20.14■□□□□ 0.81
LITAF-218ENST00000576036 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
LITAF-218ENST00000576036 ZBTB3Q9H5J0 574 aa20.14■□□□□ 0.81
LITAF-218ENST00000576036 ANKRD31Q8N7Z5 1873 aa20.13■□□□□ 0.81
LITAF-218ENST00000576036 KIAA1551Q9HCM1 1747 aa20.13■□□□□ 0.81
LITAF-218ENST00000576036 ERVV-1B6SEH8 477 aa20.13■□□□□ 0.81
LITAF-218ENST00000576036 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
LITAF-218ENST00000576036 NFIXQ14938 502 aa20.13■□□□□ 0.81
LITAF-218ENST00000576036 TBC1D9BQ66K14 1250 aa20.13■□□□□ 0.81
LITAF-218ENST00000576036 SPON1Q9HCB6 807 aa20.13■□□□□ 0.81
LITAF-218ENST00000576036 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
LITAF-218ENST00000576036 ADCY9O60503 1353 aa20.12■□□□□ 0.81
LITAF-218ENST00000576036 RGL2O15211 777 aa20.12■□□□□ 0.81
LITAF-218ENST00000576036 NLGN1Q8N2Q7 840 aa20.12■□□□□ 0.81
LITAF-218ENST00000576036 MRPL50Q8N5N7 158 aaKnown RBP20.12■□□□□ 0.81
LITAF-218ENST00000576036 ARXQ96QS3 562 aa20.12■□□□□ 0.81
LITAF-218ENST00000576036 STK31Q9BXU1 1019 aa20.12■□□□□ 0.81
LITAF-218ENST00000576036 N4BP2Q86UW6 1770 aaPredicted RBP20.12■□□□□ 0.81
LITAF-218ENST00000576036 MMP10P09238 476 aa20.11■□□□□ 0.81
LITAF-218ENST00000576036 CT47B1P0C2W7 299 aaPredicted RBP20.11■□□□□ 0.81
LITAF-218ENST00000576036 KIF6Q6ZMV9 814 aa20.11■□□□□ 0.81
LITAF-218ENST00000576036 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
LITAF-218ENST00000576036 POLRMTO00411 1230 aaKnown RBP20.1■□□□□ 0.81
LITAF-218ENST00000576036 CLEC4GQ6UXB4 293 aa20.1■□□□□ 0.81
LITAF-218ENST00000576036 GIGYF2Q6Y7W6 1299 aaKnown RBP20.1■□□□□ 0.81
LITAF-218ENST00000576036 NPM2Q86SE8 214 aaKnown RBP20.1■□□□□ 0.81
LITAF-218ENST00000576036 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
LITAF-218ENST00000576036 ZNF428Q96B54 188 aa20.1■□□□□ 0.81
LITAF-218ENST00000576036 BCL2L13Q9BXK5 485 aa20.1■□□□□ 0.81
LITAF-218ENST00000576036 RARSP54136 660 aaKnown RBP20.09■□□□□ 0.81
LITAF-218ENST00000576036 FLIIQ13045 1269 aa20.09■□□□□ 0.81
LITAF-218ENST00000576036 UBN2Q6ZU65 1347 aa20.08■□□□□ 0.81
LITAF-218ENST00000576036 ALDH1L2Q3SY69 923 aa20.08■□□□□ 0.81
LITAF-218ENST00000576036 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
LITAF-218ENST00000576036 ZNF34Q8IZ26 560 aa20.08■□□□□ 0.81
LITAF-218ENST00000576036 BICDL1Q6ZP65 573 aa20.07■□□□□ 0.8
LITAF-218ENST00000576036 TNRC6CQ9HCJ0 1690 aaKnown RBP20.07■□□□□ 0.8
LITAF-218ENST00000576036 SRCAPQ6ZRS2 3230 aa20.06■□□□□ 0.8
LITAF-218ENST00000576036 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
LITAF-218ENST00000576036 ZNF652Q9Y2D9 606 aa20.06■□□□□ 0.8
LITAF-218ENST00000576036 LAMB2P55268 1798 aa20.06■□□□□ 0.8
LITAF-218ENST00000576036 COL11A2P13942 1736 aaPredicted RBP20.05■□□□□ 0.8
LITAF-218ENST00000576036 PI4KAP2A4QPH2 592 aa20.05■□□□□ 0.8
LITAF-218ENST00000576036 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
LITAF-218ENST00000576036 KSR2Q6VAB6 950 aa20.05■□□□□ 0.8
LITAF-218ENST00000576036 PI4KAP1Q8N8J0 262 aa20.05■□□□□ 0.8
LITAF-218ENST00000576036 SMC4Q9NTJ3 1288 aa20.05■□□□□ 0.8
LITAF-218ENST00000576036 CARMIL3Q8ND23 1372 aa20.05■□□□□ 0.8
LITAF-218ENST00000576036 BRCA1P38398 1863 aaKnown RBP20.05■□□□□ 0.8
LITAF-218ENST00000576036 DDX60Q8IY21 1712 aaKnown RBP20.05■□□□□ 0.8
LITAF-218ENST00000576036 DLEC1Q9Y238 1755 aa20.04■□□□□ 0.8
LITAF-218ENST00000576036 GPTP24298 496 aa20.04■□□□□ 0.8
LITAF-218ENST00000576036 POLD1P28340 1107 aa20.04■□□□□ 0.8
LITAF-218ENST00000576036 TCIRG1Q13488 830 aa20.04■□□□□ 0.8
LITAF-218ENST00000576036 ISCA1Q9BUE6 129 aa20.04■□□□□ 0.8
LITAF-218ENST00000576036 NIP7Q9Y221 180 aaKnown RBP eCLIP20.04■□□□□ 0.8
LITAF-218ENST00000576036 MAP3K2Q9Y2U5 619 aa20.04■□□□□ 0.8
LITAF-218ENST00000576036 BCAR3O75815 825 aa20.03■□□□□ 0.8
LITAF-218ENST00000576036 SERPINB2P05120 415 aa20.03■□□□□ 0.8
LITAF-218ENST00000576036 F6X3S4 739 aa20.02■□□□□ 0.8
LITAF-218ENST00000576036 FKBP5Q13451 457 aaPredicted RBP20.02■□□□□ 0.8
LITAF-218ENST00000576036 RIC3Q7Z5B4 369 aa20.02■□□□□ 0.8
LITAF-218ENST00000576036 SETDB2Q96T68 719 aa20.02■□□□□ 0.8
LITAF-218ENST00000576036 METTL22Q9BUU2 404 aaPredicted RBP20.02■□□□□ 0.8
LITAF-218ENST00000576036 PARP3Q9Y6F1 533 aa20.02■□□□□ 0.8
LITAF-218ENST00000576036 IBTKQ9P2D0 1353 aaPredicted RBP20.02■□□□□ 0.8
LITAF-218ENST00000576036 ATP5J2-PTCD1G3V325 749 aa20.01■□□□□ 0.79
LITAF-218ENST00000576036 DDX58O95786 925 aaKnown RBP20.01■□□□□ 0.79
LITAF-218ENST00000576036 IGKV5-2P06315 115 aa20.01■□□□□ 0.79
LITAF-218ENST00000576036 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
LITAF-218ENST00000576036 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
LITAF-218ENST00000576036 NLRP10Q86W26 655 aa20.01■□□□□ 0.79
LITAF-218ENST00000576036 ABCC12Q96J65 1359 aa20■□□□□ 0.79
LITAF-218ENST00000576036 NTSR2O95665 410 aa20■□□□□ 0.79
LITAF-218ENST00000576036 MYD88Q99836 296 aa20■□□□□ 0.79
LITAF-218ENST00000576036 TRIM28Q13263 835 aaKnown RBP19.99■□□□□ 0.79
LITAF-218ENST00000576036 HSP90AB3PQ58FF7 597 aa19.99■□□□□ 0.79
LITAF-218ENST00000576036 CCDC24Q8N4L8 307 aa19.99■□□□□ 0.79
LITAF-218ENST00000576036 DNAAF4Q8WXU2 420 aa19.99■□□□□ 0.79
LITAF-218ENST00000576036 PTPRCP08575 1304 aa19.99■□□□□ 0.79
LITAF-218ENST00000576036 PXDNLA1KZ92 1463 aa19.99■□□□□ 0.79
LITAF-218ENST00000576036 FAM177BA6PVY3 158 aa19.98■□□□□ 0.79
LITAF-218ENST00000576036 FHDC1Q9C0D6 1143 aaPredicted RBP19.98■□□□□ 0.79
LITAF-218ENST00000576036 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
LITAF-218ENST00000576036 TNNQ9UQP3 1299 aa19.98■□□□□ 0.79
LITAF-218ENST00000576036 MYH3P11055 1940 aa19.98■□□□□ 0.79
LITAF-218ENST00000576036 CACNA1SQ13698 1873 aa19.97■□□□□ 0.79
LITAF-218ENST00000576036 PARP10Q53GL7 1025 aa19.97■□□□□ 0.79
LITAF-218ENST00000576036 SYNE4Q8N205 404 aa19.97■□□□□ 0.79
LITAF-218ENST00000576036 RIC1Q4ADV7 1423 aa19.96■□□□□ 0.79
LITAF-218ENST00000576036 CWF19L2Q2TBE0 894 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms