RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 JARID2Q92833 1246 aaPredicted RBP28.95■■■□□ 2.22
NPLOC4-217ENST00000574897 ARFGEF2Q9Y6D5 1785 aa28.94■■■□□ 2.22
NPLOC4-217ENST00000574897 NEURL1BA8MQ27 555 aa28.94■■■□□ 2.22
NPLOC4-217ENST00000574897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.94■■■□□ 2.22
NPLOC4-217ENST00000574897 HSP90AB4PQ58FF6 505 aa28.93■■■□□ 2.22
NPLOC4-217ENST00000574897 ANO2Q9NQ90 1003 aa28.93■■■□□ 2.22
NPLOC4-217ENST00000574897 METTL22Q9BUU2 404 aaPredicted RBP28.92■■■□□ 2.22
NPLOC4-217ENST00000574897 PALD1Q9ULE6 856 aa28.92■■■□□ 2.22
NPLOC4-217ENST00000574897 PCDH11XQ9BZA7 1347 aa28.92■■■□□ 2.22
NPLOC4-217ENST00000574897 PCDH11YQ9BZA8 1340 aa28.92■■■□□ 2.22
NPLOC4-217ENST00000574897 NHSL1Q5SYE7 1610 aa28.92■■■□□ 2.22
NPLOC4-217ENST00000574897 ANKRD13DQ6ZTN6 518 aa28.91■■■□□ 2.22
NPLOC4-217ENST00000574897 NEXNQ0ZGT2 675 aa28.9■■■□□ 2.22
NPLOC4-217ENST00000574897 GCKRQ14397 625 aa28.9■■■□□ 2.22
NPLOC4-217ENST00000574897 EPHA10Q5JZY3 1008 aa28.9■■■□□ 2.22
NPLOC4-217ENST00000574897 DDX54Q8TDD1 881 aaKnown RBP28.9■■■□□ 2.22
NPLOC4-217ENST00000574897 TNPO1Q92973 898 aaKnown RBP28.9■■■□□ 2.22
NPLOC4-217ENST00000574897 KLHDC4Q8TBB5 520 aa28.9■■■□□ 2.22
NPLOC4-217ENST00000574897 UBR2Q8IWV8 1755 aa28.89■■■□□ 2.22
NPLOC4-217ENST00000574897 IL2RBP14784 551 aa28.88■■■□□ 2.21
NPLOC4-217ENST00000574897 CLASRPQ8N2M8 674 aaKnown RBP28.88■■■□□ 2.21
NPLOC4-217ENST00000574897 SIL1Q9H173 461 aa28.88■■■□□ 2.21
NPLOC4-217ENST00000574897 CIZ1Q9ULV3 898 aaPredicted RBP28.88■■■□□ 2.21
NPLOC4-217ENST00000574897 RAB3GAP1Q15042 981 aa28.87■■■□□ 2.21
NPLOC4-217ENST00000574897 CARD10Q9BWT7 1032 aa28.87■■■□□ 2.21
NPLOC4-217ENST00000574897 ATP5J2-PTCD1G3V325 749 aa28.87■■■□□ 2.21
NPLOC4-217ENST00000574897 PTCD1O75127 700 aaKnown RBP28.87■■■□□ 2.21
NPLOC4-217ENST00000574897 SASH1O94885 1247 aa28.87■■■□□ 2.21
NPLOC4-217ENST00000574897 HDAC5Q9UQL6 1122 aa28.86■■■□□ 2.21
NPLOC4-217ENST00000574897 NBPF26B4DH59 902 aa28.86■■■□□ 2.21
NPLOC4-217ENST00000574897 NBPF14Q5TI25 921 aa28.86■■■□□ 2.21
NPLOC4-217ENST00000574897 NBPF10Q6P3W6 841 aaKnown RBP28.86■■■□□ 2.21
NPLOC4-217ENST00000574897 NBPF15Q8N660 670 aa28.86■■■□□ 2.21
NPLOC4-217ENST00000574897 EVA1CP58658 441 aa28.85■■■□□ 2.21
NPLOC4-217ENST00000574897 USP42Q9H9J4 1324 aaKnown RBP28.85■■■□□ 2.21
NPLOC4-217ENST00000574897 ST18O60284 1047 aa28.84■■■□□ 2.21
NPLOC4-217ENST00000574897 TOGARAM1Q9Y4F4 1720 aa28.84■■■□□ 2.21
NPLOC4-217ENST00000574897 SSFA2P28290 1259 aa28.83■■■□□ 2.21
NPLOC4-217ENST00000574897 AACSQ86V21 672 aa28.83■■■□□ 2.21
NPLOC4-217ENST00000574897 KCPQ6ZWJ8 1503 aa28.83■■■□□ 2.21
NPLOC4-217ENST00000574897 PAPPAQ13219 1627 aa28.83■■■□□ 2.21
NPLOC4-217ENST00000574897 TTC41PQ6P2S7 1318 aa28.83■■■□□ 2.21
NPLOC4-217ENST00000574897 NEK4P51957 841 aa28.82■■■□□ 2.2
NPLOC4-217ENST00000574897 CNTROBQ8N137 903 aa28.82■■■□□ 2.2
NPLOC4-217ENST00000574897 IFIT2P09913 472 aaKnown RBP28.82■■■□□ 2.2
NPLOC4-217ENST00000574897 UBE3BQ7Z3V4 1068 aa28.82■■■□□ 2.2
NPLOC4-217ENST00000574897 ERC1Q8IUD2 1116 aa28.82■■■□□ 2.2
NPLOC4-217ENST00000574897 EAF2Q96CJ1 260 aaPredicted RBP28.82■■■□□ 2.2
NPLOC4-217ENST00000574897 G3BP1Q13283 466 aaKnown RBP eCLIP28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 ERVV-2B6SEH9 535 aa28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 GLRX3O76003 335 aaKnown RBP28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 A1BGP04217 495 aa28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 ZGPATQ8N5A5 531 aaKnown RBP28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 CCDC8Q9H0W5 538 aaPredicted RBP28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 ECHDC1Q9NTX5 307 aa28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 TLR7Q9NYK1 1049 aaKnown RBP28.81■■■□□ 2.2
NPLOC4-217ENST00000574897 NKX1-1Q15270 411 aaPredicted RBP28.8■■■□□ 2.2
NPLOC4-217ENST00000574897 TTLL7Q6ZT98 887 aa28.8■■■□□ 2.2
NPLOC4-217ENST00000574897 KAT6BQ8WYB5 2073 aa28.79■■■□□ 2.2
NPLOC4-217ENST00000574897 SGSM2O43147 1006 aa28.79■■■□□ 2.2
NPLOC4-217ENST00000574897 CWC27Q6UX04 472 aaKnown RBP28.79■■■□□ 2.2
NPLOC4-217ENST00000574897 GZF1Q9H116 711 aaPredicted RBP28.79■■■□□ 2.2
NPLOC4-217ENST00000574897 NUP188Q5SRE5 1749 aa28.79■■■□□ 2.2
NPLOC4-217ENST00000574897 MCCP23508 829 aa28.79■■■□□ 2.2
NPLOC4-217ENST00000574897 TRAK2O60296 914 aa28.77■■■□□ 2.2
NPLOC4-217ENST00000574897 PLBD2Q8NHP8 589 aa28.77■■■□□ 2.2
NPLOC4-217ENST00000574897 A0A087WZG4 1122 aa28.77■■■□□ 2.2
NPLOC4-217ENST00000574897 PKP1Q13835 747 aa28.77■■■□□ 2.2
NPLOC4-217ENST00000574897 UPF3BQ9BZI7 483 aaKnown RBP28.76■■■□□ 2.2
NPLOC4-217ENST00000574897 NOL8Q76FK4 1167 aaKnown RBP28.76■■■□□ 2.19
NPLOC4-217ENST00000574897 BTG4Q9NY30 223 aa28.75■■■□□ 2.19
NPLOC4-217ENST00000574897 DDX11L8A8MPP1 907 aa28.74■■■□□ 2.19
NPLOC4-217ENST00000574897 HSPA4P34932 840 aa28.74■■■□□ 2.19
NPLOC4-217ENST00000574897 RFX5P48382 616 aaPredicted RBP28.74■■■□□ 2.19
NPLOC4-217ENST00000574897 LSG1Q9H089 658 aaKnown RBP28.74■■■□□ 2.19
NPLOC4-217ENST00000574897 ANAPC15P60006 121 aa28.73■■■□□ 2.19
NPLOC4-217ENST00000574897 GPATCH3Q96I76 525 aa28.73■■■□□ 2.19
NPLOC4-217ENST00000574897 TJP1Q07157 1748 aa28.73■■■□□ 2.19
NPLOC4-217ENST00000574897 RAD50Q92878 1312 aa28.73■■■□□ 2.19
NPLOC4-217ENST00000574897 CASP7P55210 303 aa28.73■■■□□ 2.19
NPLOC4-217ENST00000574897 TMX3Q96JJ7 454 aa28.72■■■□□ 2.19
NPLOC4-217ENST00000574897 GBP4Q96PP9 640 aa28.72■■■□□ 2.19
NPLOC4-217ENST00000574897 ZBTB3Q9H5J0 574 aa28.72■■■□□ 2.19
NPLOC4-217ENST00000574897 PTPN12Q05209 780 aaKnown RBP28.72■■■□□ 2.19
NPLOC4-217ENST00000574897 TNS2Q63HR2 1409 aa28.71■■■□□ 2.19
NPLOC4-217ENST00000574897 ITGB4P16144 1822 aa28.71■■■□□ 2.19
NPLOC4-217ENST00000574897 DIAPH3Q9NSV4 1193 aa28.71■■■□□ 2.19
NPLOC4-217ENST00000574897 ERBB4Q15303 1308 aa28.71■■■□□ 2.19
NPLOC4-217ENST00000574897 RABL6Q3YEC7 729 aaPredicted RBP28.7■■■□□ 2.18
NPLOC4-217ENST00000574897 BOLA2Q9H3K6 86 aa28.69■■■□□ 2.18
NPLOC4-217ENST00000574897 COPRSQ9NQ92 184 aa28.69■■■□□ 2.18
NPLOC4-217ENST00000574897 RASEFQ8IZ41 740 aa28.68■■■□□ 2.18
NPLOC4-217ENST00000574897 ARXQ96QS3 562 aa28.68■■■□□ 2.18
NPLOC4-217ENST00000574897 TMOD3Q9NYL9 352 aa28.68■■■□□ 2.18
NPLOC4-217ENST00000574897 BRPF3Q9ULD4 1205 aa28.68■■■□□ 2.18
NPLOC4-217ENST00000574897 ROBO1Q9Y6N7 1651 aa28.68■■■□□ 2.18
NPLOC4-217ENST00000574897 IL17RAQ96F46 866 aa28.68■■■□□ 2.18
NPLOC4-217ENST00000574897 ASAP1Q9ULH1 1129 aa28.68■■■□□ 2.18
NPLOC4-217ENST00000574897 PTH1RQ03431 593 aa28.67■■■□□ 2.18
NPLOC4-217ENST00000574897 SNX14Q9Y5W7 946 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms