RNA–Protein interactions for RNA: ENST00000574544.1

ABR-229, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5

Gene ABR, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-229ENST00000574544 COPS6Q7L5N1 327 aa11.58□□□□□ -0.56
ABR-229ENST00000574544 BRIP1Q9BX63 1249 aa11.58□□□□□ -0.56
ABR-229ENST00000574544 MBIPQ9NS73 344 aa11.58□□□□□ -0.56
ABR-229ENST00000574544 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
ABR-229ENST00000574544 TTLL6Q8N841 843 aa11.57□□□□□ -0.56
ABR-229ENST00000574544 ZNF428Q96B54 188 aa11.57□□□□□ -0.56
ABR-229ENST00000574544 TJP1Q07157 1748 aa11.57□□□□□ -0.56
ABR-229ENST00000574544 CICQ96RK0 1608 aaPredicted RBP11.57□□□□□ -0.56
ABR-229ENST00000574544 ADAMTS7Q9UKP4 1686 aa11.56□□□□□ -0.56
ABR-229ENST00000574544 ERVV-1B6SEH8 477 aa11.56□□□□□ -0.56
ABR-229ENST00000574544 PROSER3Q2NL68 480 aa11.56□□□□□ -0.56
ABR-229ENST00000574544 XAGE3Q8WTP9 111 aa11.56□□□□□ -0.56
ABR-229ENST00000574544 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
ABR-229ENST00000574544 ZNF831Q5JPB2 1677 aa11.55□□□□□ -0.56
ABR-229ENST00000574544 PDIA6Q15084 440 aa11.55□□□□□ -0.56
ABR-229ENST00000574544 NUTM1Q86Y26 1132 aa11.55□□□□□ -0.56
ABR-229ENST00000574544 IFT57Q9NWB7 429 aa11.55□□□□□ -0.56
ABR-229ENST00000574544 CHPF2Q9P2E5 772 aa11.55□□□□□ -0.56
ABR-229ENST00000574544 COL5A3P25940 1745 aaPredicted RBP11.55□□□□□ -0.56
ABR-229ENST00000574544 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
ABR-229ENST00000574544 C10orf71Q711Q0 1435 aa11.54□□□□□ -0.56
ABR-229ENST00000574544 TCERG1O14776 1098 aaKnown RBP11.54□□□□□ -0.56
ABR-229ENST00000574544 C21orf2O43822 256 aa11.54□□□□□ -0.56
ABR-229ENST00000574544 SUSD4Q5VX71 490 aa11.54□□□□□ -0.56
ABR-229ENST00000574544 WWC1Q8IX03 1113 aa11.54□□□□□ -0.56
ABR-229ENST00000574544 C8orf58Q8NAV2 365 aa11.54□□□□□ -0.56
ABR-229ENST00000574544 DDX21Q9NR30 783 aaKnown RBP eCLIP11.54□□□□□ -0.56
ABR-229ENST00000574544 PXDNLA1KZ92 1463 aa11.54□□□□□ -0.56
ABR-229ENST00000574544 ZNF853P0CG23 659 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 ERFEQ4G0M1 354 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 C9orf131Q5VYM1 1079 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
ABR-229ENST00000574544 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 PPP1R42Q7Z4L9 355 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
ABR-229ENST00000574544 CNKSR1Q969H4 720 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 NYXQ9GZU5 481 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 GPBP1L1Q9HC44 474 aaPredicted RBP11.53□□□□□ -0.56
ABR-229ENST00000574544 DBF4Q9UBU7 674 aaPredicted RBP11.53□□□□□ -0.56
ABR-229ENST00000574544 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 ERBB4Q15303 1308 aa11.53□□□□□ -0.56
ABR-229ENST00000574544 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.57
ABR-229ENST00000574544 MASTLQ96GX5 879 aa11.52□□□□□ -0.57
ABR-229ENST00000574544 SRGNP10124 158 aa11.51□□□□□ -0.57
ABR-229ENST00000574544 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
ABR-229ENST00000574544 ZNF34Q8IZ26 560 aa11.51□□□□□ -0.57
ABR-229ENST00000574544 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
ABR-229ENST00000574544 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
ABR-229ENST00000574544 HYPKQ9NX55 129 aa11.51□□□□□ -0.57
ABR-229ENST00000574544 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
ABR-229ENST00000574544 C4AP0C0L4 1744 aa11.51□□□□□ -0.57
ABR-229ENST00000574544 COL24A1Q17RW2 1714 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 ATP5J2-PTCD1G3V325 749 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 HOXB7P09629 217 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 NPR1P16066 1061 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 ALDH1B1P30837 517 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 RASSF7Q02833 373 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 TCIRG1Q13488 830 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 PARP10Q53GL7 1025 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 RTL5Q5HYW3 569 aaPredicted RBP11.5□□□□□ -0.57
ABR-229ENST00000574544 CCDC30Q5VVM6 783 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 STYK1Q6J9G0 422 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 TSPYL6Q8N831 410 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 RPGRQ92834 1020 aaKnown RBP11.5□□□□□ -0.57
ABR-229ENST00000574544 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 CHMP4AQ9BY43 222 aa11.5□□□□□ -0.57
ABR-229ENST00000574544 TRMT112Q9UI30 125 aaKnown RBP11.5□□□□□ -0.57
ABR-229ENST00000574544 VIRMAQ69YN4 1812 aaKnown RBP11.5□□□□□ -0.57
ABR-229ENST00000574544 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
ABR-229ENST00000574544 UBR2Q8IWV8 1755 aa11.49□□□□□ -0.57
ABR-229ENST00000574544 RGL2O15211 777 aa11.49□□□□□ -0.57
ABR-229ENST00000574544 LRP10Q7Z4F1 713 aa11.49□□□□□ -0.57
ABR-229ENST00000574544 PLBD2Q8NHP8 589 aa11.49□□□□□ -0.57
ABR-229ENST00000574544 DLG5Q8TDM6 1919 aa11.48□□□□□ -0.57
ABR-229ENST00000574544 HCLS1P14317 486 aaPredicted RBP11.48□□□□□ -0.57
ABR-229ENST00000574544 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
ABR-229ENST00000574544 TWISTNBQ3B726 338 aaPredicted RBP11.48□□□□□ -0.57
ABR-229ENST00000574544 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
ABR-229ENST00000574544 WDR63Q8IWG1 891 aa11.48□□□□□ -0.57
ABR-229ENST00000574544 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
ABR-229ENST00000574544 STK31Q9BXU1 1019 aa11.48□□□□□ -0.57
ABR-229ENST00000574544 TMX4Q9H1E5 349 aaPredicted RBP11.48□□□□□ -0.57
ABR-229ENST00000574544 UBN2Q6ZU65 1347 aa11.48□□□□□ -0.57
ABR-229ENST00000574544 SLC4A2P04920 1241 aa11.47□□□□□ -0.57
ABR-229ENST00000574544 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
ABR-229ENST00000574544 RBM17Q96I25 401 aaKnown RBP11.47□□□□□ -0.57
ABR-229ENST00000574544 MYD88Q99836 296 aa11.47□□□□□ -0.57
ABR-229ENST00000574544 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.57
ABR-229ENST00000574544 ATP10DQ9P241 1426 aa11.46□□□□□ -0.57
ABR-229ENST00000574544 DDX58O95786 925 aaKnown RBP11.46□□□□□ -0.57
ABR-229ENST00000574544 LMNB1P20700 586 aa11.46□□□□□ -0.57
ABR-229ENST00000574544 EXOSC9Q06265 439 aaKnown RBP11.46□□□□□ -0.57
ABR-229ENST00000574544 OLFM4Q6UX06 510 aa11.46□□□□□ -0.57
ABR-229ENST00000574544 JARID2Q92833 1246 aaPredicted RBP11.46□□□□□ -0.57
ABR-229ENST00000574544 FAM89AQ96GI7 184 aa11.46□□□□□ -0.57
ABR-229ENST00000574544 RRAGCQ9HB90 399 aa11.46□□□□□ -0.57
ABR-229ENST00000574544 IL16Q14005 1332 aa11.45□□□□□ -0.58
ABR-229ENST00000574544 KLRG2A4D1S0 409 aaPredicted RBP11.45□□□□□ -0.58
ABR-229ENST00000574544 NTSR2O95665 410 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms