RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 MKRN1Q9UHC7 482 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 IDEP14735 1019 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 CETN1Q12798 172 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 LCA5Q86VQ0 697 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 PANK2Q9BZ23 570 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 ZNF652Q9Y2D9 606 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 LARP6Q9BRS8 491 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 FERMT3Q86UX7 667 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 NUTM1Q86Y26 1132 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 BAG4O95429 457 aaKnown RBP18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 TXNDC2Q86VQ3 553 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 MIA2Q96PC5 1412 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 DYNC1I1O14576 645 aa18.23■□□□□ 0.51
CACNA1A-202ENST00000573710 PPP2R5DQ14738 602 aa18.22■□□□□ 0.51
CACNA1A-202ENST00000573710 FAM114A1Q8IWE2 563 aa18.22■□□□□ 0.51
CACNA1A-202ENST00000573710 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
CACNA1A-202ENST00000573710 GMNNO75496 209 aa18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 STARD3NLO95772 234 aa18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 GABPAQ06546 454 aa18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 SARNPP82979 210 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 KIF5AQ12840 1032 aa18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 CCT6BQ92526 530 aa18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 V9GYY5 206 aaPredicted RBP18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 PTPN14Q15678 1187 aa18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
CACNA1A-202ENST00000573710 ZBTB21Q9ULJ3 1066 aa18.21■□□□□ 0.5
CACNA1A-202ENST00000573710 SP4Q02446 784 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 RAB11FIP4Q86YS3 637 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 KIF4AO95239 1232 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 BAZ1AQ9NRL2 1556 aaPredicted RBP18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 FRMD4BQ9Y2L6 1034 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 USO1O60763 962 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 FGFR1OPO95684 399 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 EEF2P13639 858 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 KRT13P13646 458 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 CEP57Q86XR8 500 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 SELENOSQ9BQE4 189 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 CTNNA3Q9UI47 895 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 MIPOL1Q8TD10 442 aa18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 MPHOSPH6Q99547 160 aaKnown RBP18.2■□□□□ 0.5
CACNA1A-202ENST00000573710 UAP1Q16222 522 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 RAB34Q9BZG1 259 aa18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 WDR33Q9C0J8 1336 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 CCT2P78371 535 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 STX6O43752 255 aa18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 MRRFQ96E11 262 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 CEP83Q9Y592 693 aa18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 MCM2P49736 904 aa18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 CTCFLQ8NI51 663 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 FAM114A2Q9NRY5 505 aa18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 MAFGO15525 162 aa18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 TOP1P11387 765 aaKnown RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 GTF2A1P52655 376 aaPredicted RBP18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 ARID5AQ03989 594 aa18.19■□□□□ 0.5
CACNA1A-202ENST00000573710 BIN1O00499 593 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 CCDC50Q8IVM0 306 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 CCDC83Q8IWF9 413 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 USP47Q96K76 1375 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 CSPG5O95196 566 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 CCDC117Q8IWD4 279 aaPredicted RBP18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 DHX57Q6P158 1386 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 GPTP24298 496 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 BOLA2Q9H3K6 86 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 EXOSC9Q06265 439 aaKnown RBP18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 CFAP157Q5JU67 520 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 SFMBT1Q9UHJ3 866 aa18.18■□□□□ 0.5
CACNA1A-202ENST00000573710 CEP112Q8N8E3 955 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 SLC12A7Q9Y666 1083 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 SYCE3A1L190 88 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 GOLGA8AA7E2F4 631 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 GOLGA8BA8MQT2 603 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 HGSO14964 777 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 HSP90AA4PQ58FG1 418 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 TXNDC16Q9P2K2 825 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 CCDC25Q86WR0 208 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 CALML4Q96GE6 196 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 CCDC194A0A1B0GVG4 234 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 PRR16Q569H4 304 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 ATF7IPQ6VMQ6 1270 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 DNAAF4Q8WXU2 420 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 NGLY1Q96IV0 654 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 ZNF408Q9H9D4 720 aa18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 PPANQ9NQ55 473 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-202ENST00000573710 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 PDCD7Q8N8D1 485 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 FHOD3Q2V2M9 1422 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 HSF2BPO75031 334 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 SMC6Q96SB8 1091 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 FMN1Q68DA7 1419 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 DNAJC21Q5F1R6 531 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 MSL1Q68DK7 614 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 TMOD3Q9NYL9 352 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
CACNA1A-202ENST00000573710 IQCA1Q86XH1 822 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms