RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 NBPF5PQ86XG9 351 aaPredicted RBP16.65■□□□□ 0.26
NPLOC4-213ENST00000573519 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
NPLOC4-213ENST00000573519 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.264e-14■□□□□ 10.9
NPLOC4-213ENST00000573519 BRIP1Q9BX63 1249 aa16.65■□□□□ 0.26
NPLOC4-213ENST00000573519 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
NPLOC4-213ENST00000573519 FAM177BA6PVY3 158 aa16.64■□□□□ 0.25
NPLOC4-213ENST00000573519 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.25
NPLOC4-213ENST00000573519 EIF2S2P20042 333 aaKnown RBP16.63■□□□□ 0.25
NPLOC4-213ENST00000573519 HLFQ16534 295 aa16.63■□□□□ 0.25
NPLOC4-213ENST00000573519 C9orf131Q5VYM1 1079 aa16.63■□□□□ 0.25
NPLOC4-213ENST00000573519 ZNF219Q9P2Y4 722 aaPredicted RBP16.63■□□□□ 0.25
NPLOC4-213ENST00000573519 DLEC1Q9Y238 1755 aa16.62■□□□□ 0.25
NPLOC4-213ENST00000573519 BABAM1Q9NWV8 329 aa16.62■□□□□ 0.25
NPLOC4-213ENST00000573519 RNF181Q9P0P0 153 aa16.62■□□□□ 0.25
NPLOC4-213ENST00000573519 TRIM35Q9UPQ4 493 aa16.62■□□□□ 0.25
NPLOC4-213ENST00000573519 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
NPLOC4-213ENST00000573519 ANKRD31Q8N7Z5 1873 aa16.61■□□□□ 0.25
NPLOC4-213ENST00000573519 SENP3-EIF4A1A0A087X0R7 540 aa16.61■□□□□ 0.25
NPLOC4-213ENST00000573519 RASSF7Q02833 373 aa16.61■□□□□ 0.25
NPLOC4-213ENST00000573519 TPTE2Q6XPS3 522 aa16.61■□□□□ 0.25
NPLOC4-213ENST00000573519 TTLL7Q6ZT98 887 aa16.61■□□□□ 0.25
NPLOC4-213ENST00000573519 ZBTB3Q9H5J0 574 aa16.61■□□□□ 0.25
NPLOC4-213ENST00000573519 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
NPLOC4-213ENST00000573519 RGL2O15211 777 aa16.6■□□□□ 0.25
NPLOC4-213ENST00000573519 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
NPLOC4-213ENST00000573519 NECTIN2Q92692 538 aa16.6■□□□□ 0.25
NPLOC4-213ENST00000573519 MAP3K15Q6ZN16 1313 aa16.6■□□□□ 0.25
NPLOC4-213ENST00000573519 ERVV-1B6SEH8 477 aa16.59■□□□□ 0.25
NPLOC4-213ENST00000573519 ERBB4Q15303 1308 aa16.59■□□□□ 0.25
NPLOC4-213ENST00000573519 APAF1O14727 1248 aa16.58■□□□□ 0.24
NPLOC4-213ENST00000573519 C21orf2O43822 256 aa16.58■□□□□ 0.24
NPLOC4-213ENST00000573519 ANXA1P04083 346 aa16.58■□□□□ 0.24
NPLOC4-213ENST00000573519 GPTP24298 496 aa16.58■□□□□ 0.24
NPLOC4-213ENST00000573519 CHL1O00533 1208 aa16.57■□□□□ 0.24
NPLOC4-213ENST00000573519 SRGNP10124 158 aa16.57■□□□□ 0.24
NPLOC4-213ENST00000573519 KRT24Q2M2I5 525 aa16.57■□□□□ 0.24
NPLOC4-213ENST00000573519 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
NPLOC4-213ENST00000573519 CNKSR1Q969H4 720 aa16.57■□□□□ 0.24
NPLOC4-213ENST00000573519 MASTLQ96GX5 879 aa16.57■□□□□ 0.24
NPLOC4-213ENST00000573519 PROSER3Q2NL68 480 aa16.56■□□□□ 0.24
NPLOC4-213ENST00000573519 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
NPLOC4-213ENST00000573519 NYXQ9GZU5 481 aa16.56■□□□□ 0.24
NPLOC4-213ENST00000573519 LMNB1P20700 586 aa16.55■□□□□ 0.24
NPLOC4-213ENST00000573519 AIMP1Q12904 312 aaKnown RBP16.55■□□□□ 0.24
NPLOC4-213ENST00000573519 PDIA6Q15084 440 aa16.55■□□□□ 0.24
NPLOC4-213ENST00000573519 PRPF40BQ6NWY9 871 aaKnown RBP16.55■□□□□ 0.24
NPLOC4-213ENST00000573519 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
NPLOC4-213ENST00000573519 NFKBIEO00221 500 aa16.54■□□□□ 0.24
NPLOC4-213ENST00000573519 KIF3CO14782 793 aa16.54■□□□□ 0.24
NPLOC4-213ENST00000573519 ANP32CO43423 234 aa16.54■□□□□ 0.24
NPLOC4-213ENST00000573519 NPR1P16066 1061 aa16.54■□□□□ 0.24
NPLOC4-213ENST00000573519 GIGYF2Q6Y7W6 1299 aaKnown RBP16.54■□□□□ 0.24
NPLOC4-213ENST00000573519 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
NPLOC4-213ENST00000573519 NMRK2Q9NPI5 230 aa16.54■□□□□ 0.24
NPLOC4-213ENST00000573519 UBN2Q6ZU65 1347 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 CACNA1SQ13698 1873 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 PRELPP51888 382 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 COPS6Q7L5N1 327 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 MBIPQ9NS73 344 aa16.53■□□□□ 0.24
NPLOC4-213ENST00000573519 NUP98P52948 1817 aa16.52■□□□□ 0.24
NPLOC4-213ENST00000573519 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
NPLOC4-213ENST00000573519 SUSD4Q5VX71 490 aa16.52■□□□□ 0.24
NPLOC4-213ENST00000573519 LRP10Q7Z4F1 713 aa16.52■□□□□ 0.24
NPLOC4-213ENST00000573519 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
NPLOC4-213ENST00000573519 CHPF2Q9P2E5 772 aa16.52■□□□□ 0.24
NPLOC4-213ENST00000573519 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 SBF1O95248 1867 aa16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 SOGA3Q5TF21 947 aa16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 ZNF34Q8IZ26 560 aa16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 TAOK3Q9H2K8 898 aa16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
NPLOC4-213ENST00000573519 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
NPLOC4-213ENST00000573519 SLX4Q8IY92 1834 aa16.5■□□□□ 0.23
NPLOC4-213ENST00000573519 KLRG2A4D1S0 409 aaPredicted RBP16.5■□□□□ 0.23
NPLOC4-213ENST00000573519 GNAI1P63096 354 aa16.5■□□□□ 0.23
NPLOC4-213ENST00000573519 DUSP27Q5VZP5 1158 aa16.5■□□□□ 0.23
NPLOC4-213ENST00000573519 RRAGCQ9HB90 399 aa16.5■□□□□ 0.23
NPLOC4-213ENST00000573519 ZC3H4Q9UPT8 1303 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 NTSR2O95665 410 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 HOXB7P09629 217 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 ALDH1B1P30837 517 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 CCDC93Q567U6 631 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 TIAM2Q8IVF5 1701 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 IFT57Q9NWB7 429 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 IBTKQ9P2D0 1353 aaPredicted RBP16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 ARFGEF2Q9Y6D5 1785 aa16.49■□□□□ 0.23
NPLOC4-213ENST00000573519 ELL2O00472 640 aaPredicted RBP16.48■□□□□ 0.23
NPLOC4-213ENST00000573519 TOMM70O94826 608 aa16.48■□□□□ 0.23
NPLOC4-213ENST00000573519 ZNF853P0CG23 659 aa16.48■□□□□ 0.23
NPLOC4-213ENST00000573519 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
NPLOC4-213ENST00000573519 UTP14AQ9BVJ6 771 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-213ENST00000573519 DBF4Q9UBU7 674 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms