RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 LMNB1P20700 586 aa16.42■□□□□ 0.22
SCAMP2-212ENST00000569904 PIP4K2AP48426 406 aaPredicted RBP16.42■□□□□ 0.22
SCAMP2-212ENST00000569904 RASSF7Q02833 373 aa16.42■□□□□ 0.22
SCAMP2-212ENST00000569904 RALBP1Q15311 655 aa16.42■□□□□ 0.22
SCAMP2-212ENST00000569904 CNBD1Q8NA66 436 aa16.42■□□□□ 0.22
SCAMP2-212ENST00000569904 ZNF652Q9Y2D9 606 aa16.42■□□□□ 0.22
SCAMP2-212ENST00000569904 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
SCAMP2-212ENST00000569904 SRGNP10124 158 aa16.41■□□□□ 0.22
SCAMP2-212ENST00000569904 STYK1Q6J9G0 422 aa16.41■□□□□ 0.22
SCAMP2-212ENST00000569904 RBM46Q8TBY0 533 aaKnown RBP16.41■□□□□ 0.22
SCAMP2-212ENST00000569904 LTBP3Q9NS15 1303 aa16.41■□□□□ 0.22
SCAMP2-212ENST00000569904 KLRG2A4D1S0 409 aaPredicted RBP16.4■□□□□ 0.22
SCAMP2-212ENST00000569904 ST5P78524 1137 aa16.4■□□□□ 0.22
SCAMP2-212ENST00000569904 EIF4A1P60842 406 aaKnown RBP16.39■□□□□ 0.21
SCAMP2-212ENST00000569904 ZNF622Q969S3 477 aaKnown RBP eCLIP16.39■□□□□ 0.21
SCAMP2-212ENST00000569904 MIS18AQ9NYP9 233 aa16.39■□□□□ 0.21
SCAMP2-212ENST00000569904 GLTPD2A6NH11 291 aa16.38■□□□□ 0.21
SCAMP2-212ENST00000569904 APLP1P51693 650 aa16.38■□□□□ 0.21
SCAMP2-212ENST00000569904 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
SCAMP2-212ENST00000569904 CNKSR1Q969H4 720 aa16.38■□□□□ 0.21
SCAMP2-212ENST00000569904 MASTLQ96GX5 879 aa16.38■□□□□ 0.21
SCAMP2-212ENST00000569904 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
SCAMP2-212ENST00000569904 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
SCAMP2-212ENST00000569904 FSTL1Q12841 308 aa16.37■□□□□ 0.21
SCAMP2-212ENST00000569904 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
SCAMP2-212ENST00000569904 BABAM1Q9NWV8 329 aa16.37■□□□□ 0.21
SCAMP2-212ENST00000569904 ERBB4Q15303 1308 aa16.37■□□□□ 0.21
SCAMP2-212ENST00000569904 RIC1Q4ADV7 1423 aa16.36■□□□□ 0.21
SCAMP2-212ENST00000569904 C21orf2O43822 256 aa16.36■□□□□ 0.21
SCAMP2-212ENST00000569904 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
SCAMP2-212ENST00000569904 C7orf43Q8WVR3 580 aa16.36■□□□□ 0.21
SCAMP2-212ENST00000569904 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
SCAMP2-212ENST00000569904 NIP7Q9Y221 180 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCAMP2-212ENST00000569904 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
SCAMP2-212ENST00000569904 HLFQ16534 295 aa16.35■□□□□ 0.21
SCAMP2-212ENST00000569904 SOGA3Q5TF21 947 aa16.35■□□□□ 0.21
SCAMP2-212ENST00000569904 PRPF40BQ6NWY9 871 aaKnown RBP16.35■□□□□ 0.21
SCAMP2-212ENST00000569904 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
SCAMP2-212ENST00000569904 MAP3K15Q6ZN16 1313 aa16.35■□□□□ 0.21
SCAMP2-212ENST00000569904 ANKRD36CQ5JPF3 1778 aa16.35■□□□□ 0.21
SCAMP2-212ENST00000569904 IBTKQ9P2D0 1353 aaPredicted RBP16.35■□□□□ 0.21
SCAMP2-212ENST00000569904 NPHP1O15259 732 aa16.34■□□□□ 0.21
SCAMP2-212ENST00000569904 C16orf71Q8IYS4 520 aaPredicted RBP16.34■□□□□ 0.21
SCAMP2-212ENST00000569904 DNAJC5GQ8N7S2 189 aa16.34■□□□□ 0.21
SCAMP2-212ENST00000569904 NPR1P16066 1061 aa16.33■□□□□ 0.2
SCAMP2-212ENST00000569904 LRP10Q7Z4F1 713 aa16.33■□□□□ 0.2
SCAMP2-212ENST00000569904 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
SCAMP2-212ENST00000569904 VEGFAP15692 232 aaPredicted RBP16.32■□□□□ 0.2
SCAMP2-212ENST00000569904 TMPOP42166 694 aaKnown RBP16.32■□□□□ 0.2
SCAMP2-212ENST00000569904 RIPK4P57078 832 aa16.32■□□□□ 0.2
SCAMP2-212ENST00000569904 CRY2Q49AN0 593 aa16.32■□□□□ 0.2
SCAMP2-212ENST00000569904 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
SCAMP2-212ENST00000569904 SCN4AP35499 1836 aa16.31■□□□□ 0.2
SCAMP2-212ENST00000569904 POTECB2RU33 542 aa16.31■□□□□ 0.2
SCAMP2-212ENST00000569904 LMOD3Q0VAK6 560 aa16.31■□□□□ 0.2
SCAMP2-212ENST00000569904 DDX10Q13206 875 aaKnown RBP16.31■□□□□ 0.2
SCAMP2-212ENST00000569904 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
SCAMP2-212ENST00000569904 TSPYL4Q9UJ04 414 aa16.31■□□□□ 0.2
SCAMP2-212ENST00000569904 ABCC12Q96J65 1359 aa16.3■□□□□ 0.2
SCAMP2-212ENST00000569904 PDIA6Q15084 440 aa16.3■□□□□ 0.2
SCAMP2-212ENST00000569904 ERFEQ4G0M1 354 aa16.3■□□□□ 0.2
SCAMP2-212ENST00000569904 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
SCAMP2-212ENST00000569904 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
SCAMP2-212ENST00000569904 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
SCAMP2-212ENST00000569904 PCNTO95613 3336 aa16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 UBN2Q6ZU65 1347 aa16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 CCDC93Q567U6 631 aa16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 KIF6Q6ZMV9 814 aa16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 ZNF34Q8IZ26 560 aa16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 ZNF219Q9P2Y4 722 aaPredicted RBP16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 RRP7AQ9Y3A4 280 aaKnown RBP16.29■□□□□ 0.2
SCAMP2-212ENST00000569904 MYL6BP14649 208 aa16.28■□□□□ 0.2
SCAMP2-212ENST00000569904 ALDH1B1P30837 517 aa16.28■□□□□ 0.2
SCAMP2-212ENST00000569904 LAMB2P55268 1798 aa16.28■□□□□ 0.2
SCAMP2-212ENST00000569904 HOXA10P31260 410 aaPredicted RBP16.27■□□□□ 0.2
SCAMP2-212ENST00000569904 FKBP4Q02790 459 aaKnown RBP eCLIP16.27■□□□□ 0.2
SCAMP2-212ENST00000569904 NGEFQ8N5V2 710 aa16.27■□□□□ 0.2
SCAMP2-212ENST00000569904 RUNDC1Q96C34 613 aa16.27■□□□□ 0.2
SCAMP2-212ENST00000569904 CHL1O00533 1208 aa16.26■□□□□ 0.19
SCAMP2-212ENST00000569904 NTSR2O95665 410 aa16.26■□□□□ 0.19
SCAMP2-212ENST00000569904 RTKN2Q8IZC4 609 aa16.26■□□□□ 0.19
SCAMP2-212ENST00000569904 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
SCAMP2-212ENST00000569904 TRIM35Q9UPQ4 493 aa16.26■□□□□ 0.19
SCAMP2-212ENST00000569904 FAM177BA6PVY3 158 aa16.25■□□□□ 0.19
SCAMP2-212ENST00000569904 GTF2E1P29083 439 aaPredicted RBP16.25■□□□□ 0.19
SCAMP2-212ENST00000569904 PARP10Q53GL7 1025 aa16.25■□□□□ 0.19
SCAMP2-212ENST00000569904 SUSD4Q5VX71 490 aa16.25■□□□□ 0.19
SCAMP2-212ENST00000569904 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
SCAMP2-212ENST00000569904 L3MBTL3Q96JM7 780 aaPredicted RBP16.25■□□□□ 0.19
SCAMP2-212ENST00000569904 ADAMTSL1Q8N6G6 1762 aa16.25■□□□□ 0.19
SCAMP2-212ENST00000569904 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
SCAMP2-212ENST00000569904 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
SCAMP2-212ENST00000569904 KLRG1Q96E93 195 aa16.24■□□□□ 0.19
SCAMP2-212ENST00000569904 PSMD1Q99460 953 aa16.24■□□□□ 0.19
SCAMP2-212ENST00000569904 PRKRIP1Q9H875 184 aaPredicted RBP16.24■□□□□ 0.19
SCAMP2-212ENST00000569904 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
SCAMP2-212ENST00000569904 PROSER3Q2NL68 480 aa16.23■□□□□ 0.19
SCAMP2-212ENST00000569904 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
SCAMP2-212ENST00000569904 CC2D2BQ6DHV5 1058 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms