RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 WDR90Q96KV7 1748 aa17.39■□□□□ 0.37
SPG7-221ENST00000569720 LAMB4A4D0S4 1761 aa17.39■□□□□ 0.37
SPG7-221ENST00000569720 NFKBIEO00221 500 aa17.39■□□□□ 0.37
SPG7-221ENST00000569720 CNKSR1Q969H4 720 aa17.39■□□□□ 0.37
SPG7-221ENST00000569720 PNNQ9H307 717 aaKnown RBP17.39■□□□□ 0.37
SPG7-221ENST00000569720 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
SPG7-221ENST00000569720 GLTPD2A6NH11 291 aa17.38■□□□□ 0.37
SPG7-221ENST00000569720 C21orf2O43822 256 aa17.38■□□□□ 0.37
SPG7-221ENST00000569720 STYK1Q6J9G0 422 aa17.38■□□□□ 0.37
SPG7-221ENST00000569720 NBPF5PQ86XG9 351 aaPredicted RBP17.38■□□□□ 0.37
SPG7-221ENST00000569720 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
SPG7-221ENST00000569720 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
SPG7-221ENST00000569720 RGL2O15211 777 aa17.37■□□□□ 0.37
SPG7-221ENST00000569720 SOGA3Q5TF21 947 aa17.37■□□□□ 0.37
SPG7-221ENST00000569720 DPY19L2Q6NUT2 758 aa17.37■□□□□ 0.37
SPG7-221ENST00000569720 MASTLQ96GX5 879 aa17.37■□□□□ 0.37
SPG7-221ENST00000569720 KDM3BQ7LBC6 1761 aa17.36■□□□□ 0.37
SPG7-221ENST00000569720 SLX4Q8IY92 1834 aa17.36■□□□□ 0.37
SPG7-221ENST00000569720 SRGNP10124 158 aa17.36■□□□□ 0.37
SPG7-221ENST00000569720 VEGFAP15692 232 aaPredicted RBP17.36■□□□□ 0.37
SPG7-221ENST00000569720 PRELPP51888 382 aa17.36■□□□□ 0.37
SPG7-221ENST00000569720 SMC1BQ8NDV3 1235 aa17.36■□□□□ 0.37
SPG7-221ENST00000569720 MIS18AQ9NYP9 233 aa17.36■□□□□ 0.37
SPG7-221ENST00000569720 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
SPG7-221ENST00000569720 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
SPG7-221ENST00000569720 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
SPG7-221ENST00000569720 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
SPG7-221ENST00000569720 TPTE2Q6XPS3 522 aa17.35■□□□□ 0.37
SPG7-221ENST00000569720 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
SPG7-221ENST00000569720 NIP7Q9Y221 180 aaKnown RBP eCLIP17.35■□□□□ 0.37
SPG7-221ENST00000569720 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
SPG7-221ENST00000569720 PRPF40BQ6NWY9 871 aaKnown RBP17.34■□□□□ 0.37
SPG7-221ENST00000569720 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
SPG7-221ENST00000569720 TAOK3Q9H2K8 898 aa17.34■□□□□ 0.37
SPG7-221ENST00000569720 LTBP3Q9NS15 1303 aa17.34■□□□□ 0.37
SPG7-221ENST00000569720 DNAJC5GQ8N7S2 189 aa17.33■□□□□ 0.36
SPG7-221ENST00000569720 NPR1P16066 1061 aa17.32■□□□□ 0.36
SPG7-221ENST00000569720 GTF2E1P29083 439 aaPredicted RBP17.32■□□□□ 0.36
SPG7-221ENST00000569720 NUP98P52948 1817 aa17.32■□□□□ 0.36
SPG7-221ENST00000569720 FAM177BA6PVY3 158 aa17.31■□□□□ 0.36
SPG7-221ENST00000569720 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
SPG7-221ENST00000569720 EIF4A1P60842 406 aaKnown RBP17.3■□□□□ 0.36
SPG7-221ENST00000569720 RALBP1Q15311 655 aa17.3■□□□□ 0.36
SPG7-221ENST00000569720 HLFQ16534 295 aa17.3■□□□□ 0.36
SPG7-221ENST00000569720 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
SPG7-221ENST00000569720 KIF6Q6ZMV9 814 aa17.3■□□□□ 0.36
SPG7-221ENST00000569720 NGEFQ8N5V2 710 aa17.3■□□□□ 0.36
SPG7-221ENST00000569720 NYXQ9GZU5 481 aa17.3■□□□□ 0.36
SPG7-221ENST00000569720 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
SPG7-221ENST00000569720 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
SPG7-221ENST00000569720 ERVV-1B6SEH8 477 aa17.29■□□□□ 0.36
SPG7-221ENST00000569720 ALDH1B1P30837 517 aa17.29■□□□□ 0.36
SPG7-221ENST00000569720 KLRG1Q96E93 195 aa17.29■□□□□ 0.36
SPG7-221ENST00000569720 HTRA3P83110 453 aa17.28■□□□□ 0.36
SPG7-221ENST00000569720 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
SPG7-221ENST00000569720 MAP3K15Q6ZN16 1313 aa17.27■□□□□ 0.36
SPG7-221ENST00000569720 MYL6BP14649 208 aa17.27■□□□□ 0.36
SPG7-221ENST00000569720 ERBB4Q15303 1308 aa17.26■□□□□ 0.35
SPG7-221ENST00000569720 RIPK4P57078 832 aa17.26■□□□□ 0.35
SPG7-221ENST00000569720 RTKN2Q8IZC4 609 aa17.26■□□□□ 0.35
SPG7-221ENST00000569720 C7orf43Q8WVR3 580 aa17.26■□□□□ 0.35
SPG7-221ENST00000569720 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
SPG7-221ENST00000569720 POTECB2RU33 542 aa17.25■□□□□ 0.35
SPG7-221ENST00000569720 FKBP4Q02790 459 aaKnown RBP eCLIP17.25■□□□□ 0.35
SPG7-221ENST00000569720 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
SPG7-221ENST00000569720 TTLL7Q6ZT98 887 aa17.25■□□□□ 0.35
SPG7-221ENST00000569720 SCN4AP35499 1836 aa17.24■□□□□ 0.35
SPG7-221ENST00000569720 DDNO94850 711 aaPredicted RBP17.24■□□□□ 0.35
SPG7-221ENST00000569720 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
SPG7-221ENST00000569720 BABAM1Q9NWV8 329 aa17.24■□□□□ 0.35
SPG7-221ENST00000569720 IQCA1LA6NCM1 817 aa17.23■□□□□ 0.35
SPG7-221ENST00000569720 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
SPG7-221ENST00000569720 JMYQ8N9B5 988 aa17.23■□□□□ 0.35
SPG7-221ENST00000569720 IBTKQ9P2D0 1353 aaPredicted RBP17.23■□□□□ 0.35
SPG7-221ENST00000569720 GPTP24298 496 aa17.22■□□□□ 0.35
SPG7-221ENST00000569720 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
SPG7-221ENST00000569720 ZNF277Q9NRM2 450 aaPredicted RBP17.22■□□□□ 0.35
SPG7-221ENST00000569720 RIC1Q4ADV7 1423 aa17.21■□□□□ 0.35
SPG7-221ENST00000569720 ABCC12Q96J65 1359 aa17.21■□□□□ 0.35
SPG7-221ENST00000569720 EIF2S2P20042 333 aaKnown RBP17.21■□□□□ 0.35
SPG7-221ENST00000569720 TMPOP42166 694 aaKnown RBP17.21■□□□□ 0.35
SPG7-221ENST00000569720 CRY2Q49AN0 593 aa17.21■□□□□ 0.35
SPG7-221ENST00000569720 CC2D2BQ6DHV5 1058 aa17.21■□□□□ 0.35
SPG7-221ENST00000569720 CHADLQ6NUI6 762 aa17.21■□□□□ 0.35
SPG7-221ENST00000569720 GIGYF2Q6Y7W6 1299 aaKnown RBP17.21■□□□□ 0.35
SPG7-221ENST00000569720 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
SPG7-221ENST00000569720 MYBBP1AQ9BQG0 1328 aaKnown RBP17.21■□□□□ 0.34
SPG7-221ENST00000569720 DDX10Q13206 875 aaKnown RBP17.2■□□□□ 0.34
SPG7-221ENST00000569720 PARP10Q53GL7 1025 aa17.2■□□□□ 0.34
SPG7-221ENST00000569720 OLFM4Q6UX06 510 aa17.2■□□□□ 0.34
SPG7-221ENST00000569720 ZNF34Q8IZ26 560 aa17.2■□□□□ 0.34
SPG7-221ENST00000569720 SYNE4Q8N205 404 aa17.2■□□□□ 0.34
SPG7-221ENST00000569720 UBN2Q6ZU65 1347 aa17.2■□□□□ 0.34
SPG7-221ENST00000569720 IARSP41252 1262 aaKnown RBP17.19■□□□□ 0.34
SPG7-221ENST00000569720 GRIPAP1Q4V328 841 aa17.19■□□□□ 0.34
SPG7-221ENST00000569720 SUSD4Q5VX71 490 aa17.19■□□□□ 0.34
SPG7-221ENST00000569720 RBM17Q96I25 401 aaKnown RBP17.19■□□□□ 0.34
SPG7-221ENST00000569720 L3MBTL3Q96JM7 780 aaPredicted RBP17.19■□□□□ 0.34
SPG7-221ENST00000569720 HOXA10P31260 410 aaPredicted RBP17.18■□□□□ 0.34
SPG7-221ENST00000569720 WDR43Q15061 677 aaKnown RBP eCLIP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms