RNA–Protein interactions for RNA: ENST00000569634.1

TNRC6A-218, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-218ENST00000569634 TNFRSF25Q93038 417 aa8.57□□□□□ -1.04
TNRC6A-218ENST00000569634 ALG2Q9H553 416 aa8.57□□□□□ -1.04
TNRC6A-218ENST00000569634 ZNF358Q9NW07 568 aa8.57□□□□□ -1.04
TNRC6A-218ENST00000569634 TRIM28Q13263 835 aaKnown RBP8.56□□□□□ -1.04
TNRC6A-218ENST00000569634 TPRNQ4KMQ1 711 aa8.56□□□□□ -1.04
TNRC6A-218ENST00000569634 PSMA6P60900 246 aaKnown RBP8.55□□□□□ -1.04
TNRC6A-218ENST00000569634 NCOA4Q13772 614 aa8.55□□□□□ -1.04
TNRC6A-218ENST00000569634 LRRC69Q6ZNQ3 347 aa8.55□□□□□ -1.04
TNRC6A-218ENST00000569634 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
TNRC6A-218ENST00000569634 RHPN1Q8TCX5 695 aa8.55□□□□□ -1.04
TNRC6A-218ENST00000569634 TRIM11Q96F44 468 aa8.55□□□□□ -1.04
TNRC6A-218ENST00000569634 SEMA6BQ9H3T3 888 aa8.55□□□□□ -1.04
TNRC6A-218ENST00000569634 M0R2N6 131 aa8.54□□□□□ -1.04
TNRC6A-218ENST00000569634 TXLNAP40222 546 aa8.54□□□□□ -1.04
TNRC6A-218ENST00000569634 SLC9A9Q8IVB4 645 aa8.54□□□□□ -1.04
TNRC6A-218ENST00000569634 PARP3Q9Y6F1 533 aa8.54□□□□□ -1.04
TNRC6A-218ENST00000569634 HIRAP54198 1017 aaPredicted RBP8.53□□□□□ -1.04
TNRC6A-218ENST00000569634 PLEKHM2Q8IWE5 1019 aa8.53□□□□□ -1.04
TNRC6A-218ENST00000569634 COG6Q9Y2V7 657 aa8.53□□□□□ -1.04
TNRC6A-218ENST00000569634 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
TNRC6A-218ENST00000569634 KCNQ4P56696 695 aa8.52□□□□□ -1.05
TNRC6A-218ENST00000569634 DOC2BQ14184 412 aa8.52□□□□□ -1.05
TNRC6A-218ENST00000569634 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
TNRC6A-218ENST00000569634 ZDHHC1Q8WTX9 485 aa8.52□□□□□ -1.05
TNRC6A-218ENST00000569634 STRN4Q9NRL3 753 aa8.52□□□□□ -1.05
TNRC6A-218ENST00000569634 USP3Q9Y6I4 520 aa8.52□□□□□ -1.05
TNRC6A-218ENST00000569634 M0R082 166 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 PIK3CDO00329 1044 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 EPHA4P54764 986 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 FLIIQ13045 1269 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 GAS2L2Q8NHY3 880 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 ZNF417Q8TAU3 575 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 ZNF587Q96SQ5 575 aaPredicted RBP8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 MDFIQ99750 246 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 KCNH4Q9UQ05 1017 aa8.51□□□□□ -1.05
TNRC6A-218ENST00000569634 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
TNRC6A-218ENST00000569634 C9orf172C9J069 976 aa8.5□□□□□ -1.05
TNRC6A-218ENST00000569634 ZMYM1Q5SVZ6 1142 aa8.5□□□□□ -1.05
TNRC6A-218ENST00000569634 CCDC102BQ68D86 513 aa8.5□□□□□ -1.05
TNRC6A-218ENST00000569634 CEP63Q96MT8 703 aa8.5□□□□□ -1.05
TNRC6A-218ENST00000569634 BRD7Q9NPI1 651 aa8.5□□□□□ -1.05
TNRC6A-218ENST00000569634 NRG1Q02297 640 aaPredicted RBP8.49□□□□□ -1.05
TNRC6A-218ENST00000569634 PCSK7Q16549 785 aa8.49□□□□□ -1.05
TNRC6A-218ENST00000569634 TNS4Q8IZW8 715 aa8.49□□□□□ -1.05
TNRC6A-218ENST00000569634 HCN2Q9UL51 889 aa8.49□□□□□ -1.05
TNRC6A-218ENST00000569634 LILRB5O75023 590 aa8.48□□□□□ -1.05
TNRC6A-218ENST00000569634 ADH7P40394 386 aa8.48□□□□□ -1.05
TNRC6A-218ENST00000569634 MICALL1Q8N3F8 863 aa8.48□□□□□ -1.05
TNRC6A-218ENST00000569634 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
TNRC6A-218ENST00000569634 TPCN2Q8NHX9 752 aa8.48□□□□□ -1.05
TNRC6A-218ENST00000569634 C7orf43Q8WVR3 580 aa8.48□□□□□ -1.05
TNRC6A-218ENST00000569634 SFSWAPQ12872 951 aaKnown RBP8.47□□□□□ -1.05
TNRC6A-218ENST00000569634 POTEAQ6S8J7 498 aa8.47□□□□□ -1.05
TNRC6A-218ENST00000569634 RAC1P63000 192 aa8.46□□□□□ -1.06
TNRC6A-218ENST00000569634 TRAPPC3LQ5T215 181 aa8.46□□□□□ -1.06
TNRC6A-218ENST00000569634 SFI1A8K8P3 1242 aa8.45□□□□□ -1.06
TNRC6A-218ENST00000569634 ATP9BO43861 1147 aa8.45□□□□□ -1.06
TNRC6A-218ENST00000569634 RSPO4Q2I0M5 234 aaPredicted RBP8.45□□□□□ -1.06
TNRC6A-218ENST00000569634 DEPDC4Q8N2C3 294 aa8.45□□□□□ -1.06
TNRC6A-218ENST00000569634 SLC30A3Q99726 388 aa8.45□□□□□ -1.06
TNRC6A-218ENST00000569634 PHACTR1Q9C0D0 580 aa8.45□□□□□ -1.06
TNRC6A-218ENST00000569634 USP17L3A6NCW0 530 aa8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 USP17L4A6NCW7 530 aa8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 ZBTB7BO15156 539 aaPredicted RBP8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 ELNP15502 786 aa8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 NKAPLQ5M9Q1 402 aa8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 USP17L2Q6R6M4 530 aa8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 USP17L1Q7RTZ2 530 aa8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 SIX5Q8N196 739 aa8.44□□□□□ -1.06
TNRC6A-218ENST00000569634 SCO2A0A1W2PP80 73 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 PPP1R12BO60237 982 aaPredicted RBP8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 H2AFB2P0C5Z0 115 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 NID1P14543 1247 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 EPB42P16452 691 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 UBTFP17480 764 aaKnown RBP8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 OGFOD1Q8N543 542 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 SUSD3Q96L08 255 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 TSPAN10Q9H1Z9 355 aaPredicted RBP8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 C11orf16Q9NQ32 467 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 HCN4Q9Y3Q4 1203 aa8.43□□□□□ -1.06
TNRC6A-218ENST00000569634 ALBP02768 609 aa8.42□□□□□ -1.06
TNRC6A-218ENST00000569634 TYRO3Q06418 890 aa8.42□□□□□ -1.06
TNRC6A-218ENST00000569634 TBCELQ5QJ74 424 aa8.42□□□□□ -1.06
TNRC6A-218ENST00000569634 IER5Q5VY09 327 aa8.42□□□□□ -1.06
TNRC6A-218ENST00000569634 C20orf204Q6ZNR8 217 aa8.42□□□□□ -1.06
TNRC6A-218ENST00000569634 UBE2OQ9C0C9 1292 aaKnown RBP8.42□□□□□ -1.06
TNRC6A-218ENST00000569634 STARD13Q9Y3M8 1113 aa8.42□□□□□ -1.06
TNRC6A-218ENST00000569634 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
TNRC6A-218ENST00000569634 HDGFL1Q5TGJ6 251 aa8.41□□□□□ -1.06
TNRC6A-218ENST00000569634 BHMTQ93088 406 aa8.41□□□□□ -1.06
TNRC6A-218ENST00000569634 LENG1Q96BZ8 264 aaPredicted RBP8.41□□□□□ -1.06
TNRC6A-218ENST00000569634 ATAD2Q6PL18 1390 aa8.4□□□□□ -1.06
TNRC6A-218ENST00000569634 DYRK3O43781 588 aa8.4□□□□□ -1.06
TNRC6A-218ENST00000569634 ARID4AP29374 1257 aaPredicted RBP8.4□□□□□ -1.06
TNRC6A-218ENST00000569634 CLDN10P78369 228 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms