RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 TCERG1O14776 1098 aaKnown RBP11.67□□□□□ -0.54
CHD9-219ENST00000569225 ALDH1L2Q3SY69 923 aa11.67□□□□□ -0.54
CHD9-219ENST00000569225 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
CHD9-219ENST00000569225 ATF5Q9Y2D1 282 aaPredicted RBP11.67□□□□□ -0.54
CHD9-219ENST00000569225 TTLL7Q6ZT98 887 aa11.66□□□□□ -0.54
CHD9-219ENST00000569225 CASZ1Q86V15 1759 aa11.66□□□□□ -0.54
CHD9-219ENST00000569225 FKBP8Q14318 412 aa11.66□□□□□ -0.54
CHD9-219ENST00000569225 HSP90AB3PQ58FF7 597 aa11.66□□□□□ -0.54
CHD9-219ENST00000569225 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
CHD9-219ENST00000569225 PLBD2Q8NHP8 589 aa11.66□□□□□ -0.54
CHD9-219ENST00000569225 ZBTB3Q9H5J0 574 aa11.66□□□□□ -0.54
CHD9-219ENST00000569225 TUBGCP6Q96RT7 1819 aa11.65□□□□□ -0.54
CHD9-219ENST00000569225 PHAXQ9H814 394 aaKnown RBP11.65□□□□□ -0.54
CHD9-219ENST00000569225 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
CHD9-219ENST00000569225 MMP10P09238 476 aa11.64□□□□□ -0.55
CHD9-219ENST00000569225 FLIIQ13045 1269 aa11.64□□□□□ -0.55
CHD9-219ENST00000569225 RIC3Q7Z5B4 369 aa11.64□□□□□ -0.55
CHD9-219ENST00000569225 SSH1Q8WYL5 1049 aa11.64□□□□□ -0.55
CHD9-219ENST00000569225 SETDB2Q96T68 719 aa11.64□□□□□ -0.55
CHD9-219ENST00000569225 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
CHD9-219ENST00000569225 PARP3Q9Y6F1 533 aa11.64□□□□□ -0.55
CHD9-219ENST00000569225 FKBP5Q13451 457 aaPredicted RBP11.63□□□□□ -0.55
CHD9-219ENST00000569225 GIGYF2Q6Y7W6 1299 aaKnown RBP11.63□□□□□ -0.55
CHD9-219ENST00000569225 RARSP54136 660 aaKnown RBP11.63□□□□□ -0.55
CHD9-219ENST00000569225 NFIXQ14938 502 aa11.63□□□□□ -0.55
CHD9-219ENST00000569225 HLFQ16534 295 aa11.63□□□□□ -0.55
CHD9-219ENST00000569225 KSR2Q6VAB6 950 aa11.63□□□□□ -0.55
CHD9-219ENST00000569225 BICDL1Q6ZP65 573 aa11.63□□□□□ -0.55
CHD9-219ENST00000569225 MRPL50Q8N5N7 158 aaKnown RBP11.63□□□□□ -0.55
CHD9-219ENST00000569225 PPP1R1BQ9UD71 204 aaPredicted RBP11.63□□□□□ -0.55
CHD9-219ENST00000569225 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHD9-219ENST00000569225 CARMIL3Q8ND23 1372 aa11.63□□□□□ -0.55
CHD9-219ENST00000569225 ATP10DQ9P241 1426 aa11.63□□□□□ -0.55
CHD9-219ENST00000569225 C4AP0C0L4 1744 aa11.63□□□□□ -0.55
CHD9-219ENST00000569225 TM4SF1P30408 202 aa11.62□□□□□ -0.55
CHD9-219ENST00000569225 PTGER2P43116 358 aa11.62□□□□□ -0.55
CHD9-219ENST00000569225 TBC1D9BQ66K14 1250 aa11.62□□□□□ -0.55
CHD9-219ENST00000569225 G2E3Q7L622 706 aa11.62□□□□□ -0.55
CHD9-219ENST00000569225 PTPRCP08575 1304 aa11.62□□□□□ -0.55
CHD9-219ENST00000569225 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
CHD9-219ENST00000569225 KIF16BQ96L93 1317 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 BRPF1P55201 1214 aaPredicted RBP11.61□□□□□ -0.55
CHD9-219ENST00000569225 NEXNQ0ZGT2 675 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 TCIRG1Q13488 830 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 PARP10Q53GL7 1025 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 SGIP1Q9BQI5 828 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 BCL2L13Q9BXK5 485 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 PI4KAP2A4QPH2 592 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
CHD9-219ENST00000569225 NPHP1O15259 732 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 DDR1Q08345 913 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 PI4KAP1Q8N8J0 262 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 MAP3K2Q9Y2U5 619 aa11.61□□□□□ -0.55
CHD9-219ENST00000569225 IPO8O15397 1037 aaKnown RBP11.6□□□□□ -0.55
CHD9-219ENST00000569225 GPTP24298 496 aa11.6□□□□□ -0.55
CHD9-219ENST00000569225 NBPF5PQ86XG9 351 aaPredicted RBP11.6□□□□□ -0.55
CHD9-219ENST00000569225 ZNF34Q8IZ26 560 aa11.6□□□□□ -0.55
CHD9-219ENST00000569225 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
CHD9-219ENST00000569225 NYXQ9GZU5 481 aa11.6□□□□□ -0.55
CHD9-219ENST00000569225 SERPINB2P05120 415 aa11.59□□□□□ -0.55
CHD9-219ENST00000569225 TPTE2Q6XPS3 522 aa11.59□□□□□ -0.55
CHD9-219ENST00000569225 PPP1R42Q7Z4L9 355 aa11.59□□□□□ -0.55
CHD9-219ENST00000569225 CNBD1Q8NA66 436 aa11.59□□□□□ -0.55
CHD9-219ENST00000569225 DNAAF4Q8WXU2 420 aa11.59□□□□□ -0.55
CHD9-219ENST00000569225 API5Q9BZZ5 524 aaKnown RBP11.59□□□□□ -0.55
CHD9-219ENST00000569225 ADCY9O60503 1353 aa11.59□□□□□ -0.55
CHD9-219ENST00000569225 GTF2E1P29083 439 aaPredicted RBP11.59□□□□□ -0.55
CHD9-219ENST00000569225 TRIM28Q13263 835 aaKnown RBP11.59□□□□□ -0.55
CHD9-219ENST00000569225 MYD88Q99836 296 aa11.59□□□□□ -0.55
CHD9-219ENST00000569225 IBTKQ9P2D0 1353 aaPredicted RBP11.58□□□□□ -0.56
CHD9-219ENST00000569225 RNF123Q5XPI4 1314 aa11.58□□□□□ -0.56
CHD9-219ENST00000569225 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
CHD9-219ENST00000569225 ST5P78524 1137 aa11.58□□□□□ -0.56
CHD9-219ENST00000569225 ARHGAP45Q92619 1136 aa11.58□□□□□ -0.56
CHD9-219ENST00000569225 ISCA1Q9BUE6 129 aa11.58□□□□□ -0.56
CHD9-219ENST00000569225 UTP14AQ9BVJ6 771 aaKnown RBP11.58□□□□□ -0.56
CHD9-219ENST00000569225 RCAN3Q9UKA8 241 aa11.58□□□□□ -0.56
CHD9-219ENST00000569225 NOB1Q9ULX3 412 aaKnown RBP11.58□□□□□ -0.56
CHD9-219ENST00000569225 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 NLRP10Q86W26 655 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 KLHL34Q8N239 644 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 CCDC191Q8NCU4 936 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 LINS1Q8NG48 757 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 CD2APQ9Y5K6 639 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 LRP5O75197 1615 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 UBN2Q6ZU65 1347 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 BCAR3O75815 825 aa11.57□□□□□ -0.56
CHD9-219ENST00000569225 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
CHD9-219ENST00000569225 CWC25Q9NXE8 425 aaPredicted RBP11.57□□□□□ -0.56
CHD9-219ENST00000569225 F6X3S4 739 aa11.56□□□□□ -0.56
CHD9-219ENST00000569225 HSP90B1P14625 803 aaKnown RBP11.56□□□□□ -0.56
CHD9-219ENST00000569225 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
CHD9-219ENST00000569225 SUSD4Q5VX71 490 aa11.56□□□□□ -0.56
CHD9-219ENST00000569225 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
CHD9-219ENST00000569225 PRR5LQ6MZQ0 368 aa11.56□□□□□ -0.56
CHD9-219ENST00000569225 SLC4A10Q6U841 1118 aa11.56□□□□□ -0.56
CHD9-219ENST00000569225 TRMT112Q9UI30 125 aaKnown RBP11.56□□□□□ -0.56
CHD9-219ENST00000569225 SH3TC1Q8TE82 1336 aa11.56□□□□□ -0.56
CHD9-219ENST00000569225 C10orf71Q711Q0 1435 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms