RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 TWISTNBQ3B726 338 aaPredicted RBP16.53■□□□□ 0.24
CDT1-203ENST00000569140 SETDB2Q96T68 719 aa16.53■□□□□ 0.24
CDT1-203ENST00000569140 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
CDT1-203ENST00000569140 DBF4Q9UBU7 674 aaPredicted RBP16.53■□□□□ 0.24
CDT1-203ENST00000569140 MAP3K15Q6ZN16 1313 aa16.52■□□□□ 0.24
CDT1-203ENST00000569140 SERPINB2P05120 415 aa16.52■□□□□ 0.24
CDT1-203ENST00000569140 TM4SF1P30408 202 aa16.52■□□□□ 0.24
CDT1-203ENST00000569140 PDIA6Q15084 440 aa16.52■□□□□ 0.24
CDT1-203ENST00000569140 XAGE3Q8WTP9 111 aa16.52■□□□□ 0.24
CDT1-203ENST00000569140 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
CDT1-203ENST00000569140 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.24
CDT1-203ENST00000569140 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
CDT1-203ENST00000569140 FAM177BA6PVY3 158 aa16.51■□□□□ 0.23
CDT1-203ENST00000569140 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
CDT1-203ENST00000569140 EXOSC9Q06265 439 aaKnown RBP16.51■□□□□ 0.23
CDT1-203ENST00000569140 HLFQ16534 295 aa16.51■□□□□ 0.23
CDT1-203ENST00000569140 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
CDT1-203ENST00000569140 COPS6Q7L5N1 327 aa16.51■□□□□ 0.23
CDT1-203ENST00000569140 STK31Q9BXU1 1019 aa16.51■□□□□ 0.23
CDT1-203ENST00000569140 NIP7Q9Y221 180 aaKnown RBP eCLIP16.51■□□□□ 0.23
CDT1-203ENST00000569140 CD2APQ9Y5K6 639 aa16.51■□□□□ 0.23
CDT1-203ENST00000569140 HNRNPUQ00839 825 aaKnown RBP eCLIP16.5■□□□□ 0.23
CDT1-203ENST00000569140 CLEC4GQ6UXB4 293 aa16.5■□□□□ 0.23
CDT1-203ENST00000569140 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
CDT1-203ENST00000569140 HYPKQ9NX55 129 aa16.5■□□□□ 0.23
CDT1-203ENST00000569140 C10orf71Q711Q0 1435 aa16.5■□□□□ 0.23
CDT1-203ENST00000569140 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
CDT1-203ENST00000569140 ERVV-1B6SEH8 477 aa16.49■□□□□ 0.23
CDT1-203ENST00000569140 GPTP24298 496 aa16.49■□□□□ 0.23
CDT1-203ENST00000569140 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
CDT1-203ENST00000569140 AFDNP55196 1824 aaKnown RBP16.49■□□□□ 0.23
CDT1-203ENST00000569140 E9PSI1 815 aa16.48■□□□□ 0.23
CDT1-203ENST00000569140 GPR162Q16538 588 aa16.48■□□□□ 0.23
CDT1-203ENST00000569140 CCDC24Q8N4L8 307 aa16.48■□□□□ 0.23
CDT1-203ENST00000569140 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
CDT1-203ENST00000569140 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
CDT1-203ENST00000569140 ST5P78524 1137 aa16.47■□□□□ 0.23
CDT1-203ENST00000569140 LRP10Q7Z4F1 713 aa16.47■□□□□ 0.23
CDT1-203ENST00000569140 NUP98P52948 1817 aa16.47■□□□□ 0.23
CDT1-203ENST00000569140 A0A0G2JLW4 131 aa16.46■□□□□ 0.23
CDT1-203ENST00000569140 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
CDT1-203ENST00000569140 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
CDT1-203ENST00000569140 PHAXQ9H814 394 aaKnown RBP16.46■□□□□ 0.23
CDT1-203ENST00000569140 N4BP2Q86UW6 1770 aaPredicted RBP16.46■□□□□ 0.22
CDT1-203ENST00000569140 KIF13BQ9NQT8 1826 aa16.45■□□□□ 0.22
CDT1-203ENST00000569140 RIC3Q7Z5B4 369 aa16.45■□□□□ 0.22
CDT1-203ENST00000569140 PXDNLA1KZ92 1463 aa16.45■□□□□ 0.22
CDT1-203ENST00000569140 NRXN2Q9P2S2 1712 aa16.45■□□□□ 0.22
CDT1-203ENST00000569140 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
CDT1-203ENST00000569140 RGL2O15211 777 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 DPEP1P16444 411 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 TGFB2P61812 414 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 SLFN5Q08AF3 891 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 HSP90AB3PQ58FF7 597 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 PRR5LQ6MZQ0 368 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 PLBD2Q8NHP8 589 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 ZNF428Q96B54 188 aa16.44■□□□□ 0.22
CDT1-203ENST00000569140 VAMP4O75379 141 aa16.43■□□□□ 0.22
CDT1-203ENST00000569140 DDX58O95786 925 aaKnown RBP16.43■□□□□ 0.22
CDT1-203ENST00000569140 CHRNA5P30532 468 aa16.43■□□□□ 0.22
CDT1-203ENST00000569140 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
CDT1-203ENST00000569140 NYXQ9GZU5 481 aa16.43■□□□□ 0.22
CDT1-203ENST00000569140 UBN2Q6ZU65 1347 aa16.43■□□□□ 0.22
CDT1-203ENST00000569140 ANKRD36CQ5JPF3 1778 aa16.42■□□□□ 0.22
CDT1-203ENST00000569140 ARFGEF2Q9Y6D5 1785 aa16.42■□□□□ 0.22
CDT1-203ENST00000569140 PPP1R42Q7Z4L9 355 aa16.42■□□□□ 0.22
CDT1-203ENST00000569140 NUTM1Q86Y26 1132 aa16.42■□□□□ 0.22
CDT1-203ENST00000569140 C2CD5Q86YS7 1000 aa16.42■□□□□ 0.22
CDT1-203ENST00000569140 TCIRG1Q13488 830 aa16.41■□□□□ 0.22
CDT1-203ENST00000569140 PARP10Q53GL7 1025 aa16.41■□□□□ 0.22
CDT1-203ENST00000569140 SUSD4Q5VX71 490 aa16.41■□□□□ 0.22
CDT1-203ENST00000569140 ZNF34Q8IZ26 560 aa16.41■□□□□ 0.22
CDT1-203ENST00000569140 BCS1LQ9Y276 419 aa16.41■□□□□ 0.22
CDT1-203ENST00000569140 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
CDT1-203ENST00000569140 ATP5J2-PTCD1G3V325 749 aa16.4■□□□□ 0.22
CDT1-203ENST00000569140 H0YIN7 160 aa16.4■□□□□ 0.22
CDT1-203ENST00000569140 PDE6BP35913 854 aa16.4■□□□□ 0.22
CDT1-203ENST00000569140 FKBP5Q13451 457 aaPredicted RBP16.4■□□□□ 0.22
CDT1-203ENST00000569140 ZNF622Q969S3 477 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDT1-203ENST00000569140 MYD88Q99836 296 aa16.4■□□□□ 0.22
CDT1-203ENST00000569140 UTP14AQ9BVJ6 771 aaKnown RBP16.4■□□□□ 0.22
CDT1-203ENST00000569140 BRIP1Q9BX63 1249 aa16.4■□□□□ 0.22
CDT1-203ENST00000569140 YBX3P16989 372 aaKnown RBP eCLIP16.39■□□□□ 0.214e-10■□□□□ 9.5
CDT1-203ENST00000569140 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
CDT1-203ENST00000569140 G2E3Q7L622 706 aa16.39■□□□□ 0.21
CDT1-203ENST00000569140 PIM2Q9P1W9 311 aa16.39■□□□□ 0.21
CDT1-203ENST00000569140 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
CDT1-203ENST00000569140 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.21
CDT1-203ENST00000569140 FLIIQ13045 1269 aa16.38■□□□□ 0.21
CDT1-203ENST00000569140 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
CDT1-203ENST00000569140 ABCC12Q96J65 1359 aa16.38■□□□□ 0.21
CDT1-203ENST00000569140 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
CDT1-203ENST00000569140 NTSR2O95665 410 aa16.37■□□□□ 0.21
CDT1-203ENST00000569140 DALRD3Q5D0E6 543 aaKnown RBP16.37■□□□□ 0.21
CDT1-203ENST00000569140 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
CDT1-203ENST00000569140 PI4KAP1Q8N8J0 262 aa16.37■□□□□ 0.21
CDT1-203ENST00000569140 IBTKQ9P2D0 1353 aaPredicted RBP16.37■□□□□ 0.21
CDT1-203ENST00000569140 COL11A2P13942 1736 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms