RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	SNX14	Q9Y5W7	946 aa		15.28	■□□□□ 0.04
PKM-222	ENST00000568883	GRM8	O00222	908 aa		15.27	■□□□□ 0.04
PKM-222	ENST00000568883	MAP4K4	O95819	1239 aa	Predicted RBP	15.27	■□□□□ 0.04
PKM-222	ENST00000568883	NEXN	Q0ZGT2	675 aa		15.27	■□□□□ 0.04
PKM-222	ENST00000568883	LRSAM1	Q6UWE0	723 aa		15.27	■□□□□ 0.04
PKM-222	ENST00000568883	RAPGEF4	Q8WZA2	1011 aa		15.27	■□□□□ 0.04
PKM-222	ENST00000568883	LIMCH1	Q9UPQ0	1083 aa		15.27	■□□□□ 0.04
PKM-222	ENST00000568883	ATP6V1D	Q9Y5K8	247 aa		15.27	■□□□□ 0.04
PKM-222	ENST00000568883	ANXA1	P04083	346 aa		15.27	■□□□□ 0.03
PKM-222	ENST00000568883	G3BP1	Q13283	466 aa	Known RBP eCLIP	15.27	■□□□□ 0.03	6e-11	■■■□□ 18.3
PKM-222	ENST00000568883	CWC27	Q6UX04	472 aa	Known RBP	15.27	■□□□□ 0.03
PKM-222	ENST00000568883	NOL8	Q76FK4	1167 aa	Known RBP	15.27	■□□□□ 0.03
PKM-222	ENST00000568883	CRYBG1	Q9Y4K1	1723 aa		15.26	■□□□□ 0.03
PKM-222	ENST00000568883	PDIA4	P13667	645 aa	Known RBP	15.26	■□□□□ 0.03
PKM-222	ENST00000568883	ERBB3	P21860	1342 aa		15.26	■□□□□ 0.03
PKM-222	ENST00000568883	LARP1	Q6PKG0	1096 aa	Known RBP	15.26	■□□□□ 0.03
PKM-222	ENST00000568883	ZSCAN31	Q96LW9	406 aa	Predicted RBP	15.26	■□□□□ 0.03
PKM-222	ENST00000568883	TM6SF1	Q9BZW5	370 aa		15.26	■□□□□ 0.03
PKM-222	ENST00000568883	SPG7	Q9UQ90	795 aa		15.26	■□□□□ 0.03
PKM-222	ENST00000568883	KLHL34	Q8N239	644 aa		15.25	■□□□□ 0.03
PKM-222	ENST00000568883	TTC14	Q96N46	770 aa		15.25	■□□□□ 0.03
PKM-222	ENST00000568883	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	15.25	■□□□□ 0.03
PKM-222	ENST00000568883	ABCC6	O95255	1503 aa		15.25	■□□□□ 0.03
PKM-222	ENST00000568883	ZKSCAN1	P17029	563 aa	Predicted RBP	15.25	■□□□□ 0.03
PKM-222	ENST00000568883	TAT	P17735	454 aa	Predicted RBP	15.25	■□□□□ 0.03
PKM-222	ENST00000568883	CSPP1	Q1MSJ5	1256 aa		15.25	■□□□□ 0.03
PKM-222	ENST00000568883	AACS	Q86V21	672 aa		15.25	■□□□□ 0.03
PKM-222	ENST00000568883	PROSER2	Q86WR7	435 aa	Predicted RBP	15.25	■□□□□ 0.03
PKM-222	ENST00000568883	IL25	Q9H293	177 aa		15.25	■□□□□ 0.03
PKM-222	ENST00000568883	SH2B1	Q9NRF2	756 aa	Predicted RBP	15.25	■□□□□ 0.03
PKM-222	ENST00000568883	ADAMTS7	Q9UKP4	1686 aa		15.24	■□□□□ 0.03
PKM-222	ENST00000568883	C1orf167	Q5SNV9	1468 aa		15.24	■□□□□ 0.03
PKM-222	ENST00000568883	XPC	Q01831	940 aa	Predicted RBP	15.24	■□□□□ 0.03
PKM-222	ENST00000568883	PROSER3	Q2NL68	480 aa		15.24	■□□□□ 0.03
PKM-222	ENST00000568883	VPS53	Q5VIR6	699 aa		15.24	■□□□□ 0.03
PKM-222	ENST00000568883	FOXD4L5	Q5VV16	416 aa	Predicted RBP	15.24	■□□□□ 0.03
PKM-222	ENST00000568883	RIC3	Q7Z5B4	369 aa		15.24	■□□□□ 0.03
PKM-222	ENST00000568883	ZSCAN30	Q86W11	494 aa		15.24	■□□□□ 0.03
PKM-222	ENST00000568883	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	15.24	■□□□□ 0.03
PKM-222	ENST00000568883	C19orf44	Q9H6X5	657 aa		15.24	■□□□□ 0.03
PKM-222	ENST00000568883	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	15.24	■□□□□ 0.03
PKM-222	ENST00000568883	TRPM3	Q9HCF6	1732 aa	Predicted RBP	15.23	■□□□□ 0.03
PKM-222	ENST00000568883	PRIM1	P49642	420 aa	Known RBP	15.23	■□□□□ 0.03
PKM-222	ENST00000568883	CWF19L2	Q2TBE0	894 aa	Known RBP	15.23	■□□□□ 0.03
PKM-222	ENST00000568883	ZNF790	Q6PG37	636 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	TMEM87A	Q8NBN3	555 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	SLC52A2	Q9HAB3	445 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	TMEM63C	Q9P1W3	806 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	SMC3	Q9UQE7	1217 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	MSN	P26038	577 aa	Known RBP	15.23	■□□□□ 0.03
PKM-222	ENST00000568883	AK2	P54819	239 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	KCNB2	Q92953	911 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	RBSN	Q9H1K0	784 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	CYP46A1	Q9Y6A2	500 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	RGPD2	P0DJD1	1756 aa		15.23	■□□□□ 0.03
PKM-222	ENST00000568883	NPHP3	Q7Z494	1330 aa		15.22	■□□□□ 0.03
PKM-222	ENST00000568883	LETM1	O95202	739 aa	Predicted RBP	15.22	■□□□□ 0.03
PKM-222	ENST00000568883	CAST	P20810	708 aa	Known RBP	15.22	■□□□□ 0.03
PKM-222	ENST00000568883	PSMA5	P28066	241 aa		15.22	■□□□□ 0.03
PKM-222	ENST00000568883	SUCLG2	Q96I99	432 aa		15.22	■□□□□ 0.03
PKM-222	ENST00000568883	RBM27	Q9P2N5	1060 aa	Known RBP	15.22	■□□□□ 0.03
PKM-222	ENST00000568883	AXIN2	Q9Y2T1	843 aa		15.22	■□□□□ 0.03
PKM-222	ENST00000568883	AK9	Q5TCS8	1911 aa		15.21	■□□□□ 0.03
PKM-222	ENST00000568883	SYCE3	A1L190	88 aa		15.21	■□□□□ 0.03
PKM-222	ENST00000568883	ZSCAN22	P10073	491 aa	Predicted RBP	15.21	■□□□□ 0.03
PKM-222	ENST00000568883	RNF20	Q5VTR2	975 aa		15.21	■□□□□ 0.03
PKM-222	ENST00000568883	NAP1L5	Q96NT1	182 aa	Predicted RBP	15.21	■□□□□ 0.03
PKM-222	ENST00000568883	BICC1	Q9H694	974 aa	Known RBP	15.21	■□□□□ 0.03
PKM-222	ENST00000568883	PDRG1	Q9NUG6	133 aa		15.21	■□□□□ 0.03
PKM-222	ENST00000568883	SETD1B	Q9UPS6	1966 aa	Known RBP	15.21	■□□□□ 0.03
PKM-222	ENST00000568883	CCDC171	Q6TFL3	1326 aa		15.21	■□□□□ 0.02
PKM-222	ENST00000568883	SIPA1L3	O60292	1781 aa	Predicted RBP	15.21	■□□□□ 0.02
PKM-222	ENST00000568883	RASEF	Q8IZ41	740 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	IFNL2	Q8IZJ0	200 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	PDLIM2	Q96JY6	352 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	TSPY26P	Q9H489	355 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	ZSWIM6	Q9HCJ5	1215 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	NLRP2	Q9NX02	1062 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	STX6	O43752	255 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	KCNJ4	P48050	445 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	AIMP1	Q12904	312 aa	Known RBP	15.2	■□□□□ 0.02
PKM-222	ENST00000568883	TTC5	Q8N0Z6	440 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	JAKMIP1	Q96N16	626 aa	Known RBP	15.2	■□□□□ 0.02
PKM-222	ENST00000568883	SNRK	Q9NRH2	765 aa		15.2	■□□□□ 0.02
PKM-222	ENST00000568883	PA2G4	Q9UQ80	394 aa	Known RBP	15.2	■□□□□ 0.02
PKM-222	ENST00000568883	RPAP1	Q9BWH6	1393 aa	Predicted RBP	15.2	■□□□□ 0.02
PKM-222	ENST00000568883	ERBB4	Q15303	1308 aa		15.19	■□□□□ 0.02
PKM-222	ENST00000568883	PHKG2	P15735	406 aa		15.19	■□□□□ 0.02
PKM-222	ENST00000568883	PDIA6	Q15084	440 aa		15.19	■□□□□ 0.02
PKM-222	ENST00000568883	ANKRD1	Q15327	319 aa		15.19	■□□□□ 0.02
PKM-222	ENST00000568883	RUFY3	Q7L099	469 aa		15.19	■□□□□ 0.02
PKM-222	ENST00000568883	FAM184A	Q8NB25	1140 aa		15.19	■□□□□ 0.02
PKM-222	ENST00000568883	METTL22	Q9BUU2	404 aa	Predicted RBP	15.19	■□□□□ 0.02
PKM-222	ENST00000568883	DCC	P43146	1447 aa		15.19	■□□□□ 0.02
PKM-222	ENST00000568883	NEURL1B	A8MQ27	555 aa		15.18	■□□□□ 0.02
PKM-222	ENST00000568883	SNRPA1	P09661	255 aa	Known RBP	15.18	■□□□□ 0.02
PKM-222	ENST00000568883	ATF3	P18847	181 aa		15.18	■□□□□ 0.02
PKM-222	ENST00000568883	PRPF40B	Q6NWY9	871 aa	Known RBP	15.18	■□□□□ 0.02
PKM-222	ENST00000568883	DCAF5	Q96JK2	942 aa		15.18	■□□□□ 0.02
PKM-222	ENST00000568883	PRAMEF22	A3QJZ6	481 aa		15.18	■□□□□ 0.02

Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms