RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.88
PKD1-236ENST00000568796 STYK1Q6J9G0 422 aa20.56■□□□□ 0.88
PKD1-236ENST00000568796 PRPF40BQ6NWY9 871 aaKnown RBP20.56■□□□□ 0.88
PKD1-236ENST00000568796 NBPF5PQ86XG9 351 aaPredicted RBP20.56■□□□□ 0.88
PKD1-236ENST00000568796 MASTLQ96GX5 879 aa20.56■□□□□ 0.88
PKD1-236ENST00000568796 SIPA1L3O60292 1781 aaPredicted RBP20.56■□□□□ 0.88
PKD1-236ENST00000568796 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
PKD1-236ENST00000568796 SRGNP10124 158 aa20.55■□□□□ 0.88
PKD1-236ENST00000568796 SOGA3Q5TF21 947 aa20.55■□□□□ 0.88
PKD1-236ENST00000568796 MCM10Q7L590 875 aa20.55■□□□□ 0.88
PKD1-236ENST00000568796 COL11A2P13942 1736 aaPredicted RBP20.55■□□□□ 0.88
PKD1-236ENST00000568796 CAPN15O75808 1086 aa20.54■□□□□ 0.88
PKD1-236ENST00000568796 SNRPA1P09661 255 aaKnown RBP20.54■□□□□ 0.88
PKD1-236ENST00000568796 ZNF652Q9Y2D9 606 aa20.54■□□□□ 0.88
PKD1-236ENST00000568796 LTBP3Q9NS15 1303 aa20.53■□□□□ 0.88
PKD1-236ENST00000568796 DDNO94850 711 aaPredicted RBP20.53■□□□□ 0.88
PKD1-236ENST00000568796 TNS4Q8IZW8 715 aa20.53■□□□□ 0.88
PKD1-236ENST00000568796 FER1L6Q2WGJ9 1857 aa20.52■□□□□ 0.88
PKD1-236ENST00000568796 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
PKD1-236ENST00000568796 HSPA1AP0DMV8 641 aaKnown RBP20.52■□□□□ 0.88
PKD1-236ENST00000568796 HSPA1BP0DMV9 641 aaKnown RBP20.52■□□□□ 0.88
PKD1-236ENST00000568796 CLEC4GQ6UXB4 293 aa20.52■□□□□ 0.88
PKD1-236ENST00000568796 SLX4Q8IY92 1834 aa20.51■□□□□ 0.87
PKD1-236ENST00000568796 DCTN1Q14203 1278 aa20.51■□□□□ 0.87
PKD1-236ENST00000568796 CHADLQ6NUI6 762 aa20.51■□□□□ 0.87
PKD1-236ENST00000568796 PCNTO95613 3336 aa20.51■□□□□ 0.87
PKD1-236ENST00000568796 TPTE2Q6XPS3 522 aa20.5■□□□□ 0.87
PKD1-236ENST00000568796 NIP7Q9Y221 180 aaKnown RBP eCLIP20.5■□□□□ 0.87
PKD1-236ENST00000568796 DICER1Q9UPY3 1922 aaKnown RBP20.5■□□□□ 0.87
PKD1-236ENST00000568796 CACNA1SQ13698 1873 aa20.5■□□□□ 0.87
PKD1-236ENST00000568796 POTEIP0CG38 1075 aa20.49■□□□□ 0.87
PKD1-236ENST00000568796 POTEJP0CG39 1038 aa20.49■□□□□ 0.87
PKD1-236ENST00000568796 NPR1P16066 1061 aa20.49■□□□□ 0.87
PKD1-236ENST00000568796 PPP2R1AP30153 589 aa20.49■□□□□ 0.87
PKD1-236ENST00000568796 CCDC93Q567U6 631 aa20.49■□□□□ 0.87
PKD1-236ENST00000568796 GTF2E1P29083 439 aaPredicted RBP20.48■□□□□ 0.87
PKD1-236ENST00000568796 BCORQ6W2J9 1755 aa20.48■□□□□ 0.87
PKD1-236ENST00000568796 IQCA1LA6NCM1 817 aa20.47■□□□□ 0.87
PKD1-236ENST00000568796 NBPF26B4DH59 902 aa20.47■□□□□ 0.87
PKD1-236ENST00000568796 NBPF10Q6P3W6 841 aaKnown RBP20.47■□□□□ 0.87
PKD1-236ENST00000568796 NBPF15Q8N660 670 aa20.47■□□□□ 0.87
PKD1-236ENST00000568796 MKRN1Q9UHC7 482 aaKnown RBP20.47■□□□□ 0.87
PKD1-236ENST00000568796 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
PKD1-236ENST00000568796 CREBZFQ9NS37 354 aa20.46■□□□□ 0.87
PKD1-236ENST00000568796 MIS18AQ9NYP9 233 aa20.46■□□□□ 0.87
PKD1-236ENST00000568796 HTATSF1O43719 755 aaKnown RBP20.45■□□□□ 0.86
PKD1-236ENST00000568796 FKBP4Q02790 459 aaKnown RBP eCLIP20.45■□□□□ 0.86
PKD1-236ENST00000568796 TAF7Q15545 349 aaPredicted RBP20.45■□□□□ 0.86
PKD1-236ENST00000568796 NGEFQ8N5V2 710 aa20.45■□□□□ 0.86
PKD1-236ENST00000568796 C7orf43Q8WVR3 580 aa20.45■□□□□ 0.86
PKD1-236ENST00000568796 NEFMP07197 916 aa20.44■□□□□ 0.86
PKD1-236ENST00000568796 EAPPQ56P03 285 aaPredicted RBP20.44■□□□□ 0.86
PKD1-236ENST00000568796 OLFM4Q6UX06 510 aa20.44■□□□□ 0.86
PKD1-236ENST00000568796 HLFQ16534 295 aa20.43■□□□□ 0.86
PKD1-236ENST00000568796 LDHDQ86WU2 507 aa20.43■□□□□ 0.86
PKD1-236ENST00000568796 RTKN2Q8IZC4 609 aa20.43■□□□□ 0.86
PKD1-236ENST00000568796 TAF1DQ9H5J8 278 aaPredicted RBP20.43■□□□□ 0.86
PKD1-236ENST00000568796 ARFGEF2Q9Y6D5 1785 aa20.42■□□□□ 0.86
PKD1-236ENST00000568796 KLRG2A4D1S0 409 aaPredicted RBP20.42■□□□□ 0.86
PKD1-236ENST00000568796 CLEC11AQ9Y240 323 aa20.42■□□□□ 0.86
PKD1-236ENST00000568796 RGL2O15211 777 aa20.41■□□□□ 0.86
PKD1-236ENST00000568796 ALDH1B1P30837 517 aa20.41■□□□□ 0.86
PKD1-236ENST00000568796 L3MBTL3Q96JM7 780 aaPredicted RBP20.41■□□□□ 0.86
PKD1-236ENST00000568796 ZNF541Q9H0D2 1346 aa20.41■□□□□ 0.86
PKD1-236ENST00000568796 SYNE4Q8N205 404 aa20.4■□□□□ 0.86
PKD1-236ENST00000568796 HACL1Q9UJ83 578 aa20.4■□□□□ 0.86
PKD1-236ENST00000568796 RRP7AQ9Y3A4 280 aaKnown RBP20.4■□□□□ 0.86
PKD1-236ENST00000568796 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.85
PKD1-236ENST00000568796 NUTM1Q86Y26 1132 aa20.39■□□□□ 0.85
PKD1-236ENST00000568796 NYXQ9GZU5 481 aa20.39■□□□□ 0.85
PKD1-236ENST00000568796 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
PKD1-236ENST00000568796 PNISRQ8TF01 805 aaKnown RBP20.38■□□□□ 0.85
PKD1-236ENST00000568796 PASKQ96RG2 1323 aa20.37■□□□□ 0.85
PKD1-236ENST00000568796 EPHX2P34913 555 aa20.37■□□□□ 0.85
PKD1-236ENST00000568796 CNTNAP1P78357 1384 aa20.36■□□□□ 0.85
PKD1-236ENST00000568796 RNF123Q5XPI4 1314 aa20.36■□□□□ 0.85
PKD1-236ENST00000568796 TMEM88BA6NKF7 163 aa20.36■□□□□ 0.85
PKD1-236ENST00000568796 MYL6BP14649 208 aa20.36■□□□□ 0.85
PKD1-236ENST00000568796 JDP2Q8WYK2 163 aa20.36■□□□□ 0.85
PKD1-236ENST00000568796 RPGRQ92834 1020 aaKnown RBP20.36■□□□□ 0.85
PKD1-236ENST00000568796 SCN4AP35499 1836 aa20.36■□□□□ 0.85
PKD1-236ENST00000568796 ABCC12Q96J65 1359 aa20.35■□□□□ 0.85
PKD1-236ENST00000568796 MAP3K15Q6ZN16 1313 aa20.35■□□□□ 0.85
PKD1-236ENST00000568796 ERVV-1B6SEH8 477 aa20.35■□□□□ 0.85
PKD1-236ENST00000568796 GPTP24298 496 aa20.35■□□□□ 0.85
PKD1-236ENST00000568796 TTLL7Q6ZT98 887 aa20.35■□□□□ 0.85
PKD1-236ENST00000568796 ZBTB3Q9H5J0 574 aa20.35■□□□□ 0.85
PKD1-236ENST00000568796 FZD9O00144 591 aa20.34■□□□□ 0.85
PKD1-236ENST00000568796 THUMPD2Q9BTF0 503 aaKnown RBP20.34■□□□□ 0.85
PKD1-236ENST00000568796 GJA3Q9Y6H8 435 aa20.34■□□□□ 0.85
PKD1-236ENST00000568796 TCERG1O14776 1098 aaKnown RBP20.33■□□□□ 0.85
PKD1-236ENST00000568796 ITGBL1O95965 494 aaPredicted RBP20.33■□□□□ 0.85
PKD1-236ENST00000568796 EIF6P56537 245 aaKnown RBP20.33■□□□□ 0.85
PKD1-236ENST00000568796 EIF4A1P60842 406 aaKnown RBP20.33■□□□□ 0.85
PKD1-236ENST00000568796 MAP1SQ66K74 1059 aaPredicted RBP20.33■□□□□ 0.85
PKD1-236ENST00000568796 PNMA8AQ86V59 439 aaPredicted RBP20.33■□□□□ 0.85
PKD1-236ENST00000568796 AIDAQ96BJ3 306 aa20.33■□□□□ 0.85
PKD1-236ENST00000568796 PSMD1Q99460 953 aa20.33■□□□□ 0.85
PKD1-236ENST00000568796 FOXN1O15353 648 aa20.32■□□□□ 0.84
PKD1-236ENST00000568796 VEGFBP49765 207 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms