RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 SNX21Q969T3 373 aa19.13■□□□□ 0.65
TSC2-222ENST00000568454 SLU7O95391 586 aaKnown RBP19.13■□□□□ 0.65
TSC2-222ENST00000568454 DNA2P51530 1060 aa19.13■□□□□ 0.65
TSC2-222ENST00000568454 KRI1Q8N9T8 703 aaKnown RBP19.13■□□□□ 0.65
TSC2-222ENST00000568454 PIBF1Q8WXW3 757 aa19.13■□□□□ 0.65
TSC2-222ENST00000568454 SLC12A7Q9Y666 1083 aa19.13■□□□□ 0.65
TSC2-222ENST00000568454 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
TSC2-222ENST00000568454 NAPBQ9H115 298 aa19.13■□□□□ 0.65
TSC2-222ENST00000568454 SEC63Q9UGP8 760 aaKnown RBP19.13■□□□□ 0.65
TSC2-222ENST00000568454 NCOA1Q15788 1441 aa19.13■□□□□ 0.65
TSC2-222ENST00000568454 CCDC102BQ68D86 513 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 TMX3Q96JJ7 454 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 PANK2Q9BZ23 570 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 HMG20BQ9P0W2 317 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 CTAGE15A4D2H0 777 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 IGHDP01880 384 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 CTAGE8P0CG41 777 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 CCDC186Q7Z3E2 898 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 CTAGE6Q86UF2 777 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 CTAGE4Q8IX94 777 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
TSC2-222ENST00000568454 HOOK3Q86VS8 718 aa19.12■□□□□ 0.65
TSC2-222ENST00000568454 GOLGA8AA7E2F4 631 aa19.11■□□□□ 0.65
TSC2-222ENST00000568454 ZNF213O14771 459 aa19.11■□□□□ 0.65
TSC2-222ENST00000568454 TMEM266Q2M3C6 531 aa19.11■□□□□ 0.65
TSC2-222ENST00000568454 ECHDC1Q9NTX5 307 aa19.11■□□□□ 0.65
TSC2-222ENST00000568454 CYB5RLQ6IPT4 315 aa19.11■□□□□ 0.65
TSC2-222ENST00000568454 JADE2Q9NQC1 790 aa19.11■□□□□ 0.65
TSC2-222ENST00000568454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.11■□□□□ 0.65
TSC2-222ENST00000568454 ZSWIM4Q9H7M6 989 aa19.11■□□□□ 0.65
TSC2-222ENST00000568454 NESP48681 1621 aa19.1■□□□□ 0.65
TSC2-222ENST00000568454 TUBB4BP68371 445 aa19.1■□□□□ 0.65
TSC2-222ENST00000568454 UBE4AQ14139 1066 aa19.1■□□□□ 0.65
TSC2-222ENST00000568454 METTL24Q5JXM2 366 aa19.1■□□□□ 0.65
TSC2-222ENST00000568454 ZNF830Q96NB3 372 aaPredicted RBP19.1■□□□□ 0.65
TSC2-222ENST00000568454 RSPH14Q9UHP6 348 aa19.1■□□□□ 0.65
TSC2-222ENST00000568454 C6orf163Q5TEZ5 329 aa19.1■□□□□ 0.65
TSC2-222ENST00000568454 BBXQ8WY36 941 aaPredicted RBP19.1■□□□□ 0.65
TSC2-222ENST00000568454 RNF41Q9H4P4 317 aaPredicted RBP19.1■□□□□ 0.65
TSC2-222ENST00000568454 DNAI1Q9UI46 699 aa19.1■□□□□ 0.65
TSC2-222ENST00000568454 IGHMBP2P38935 993 aaKnown RBP19.1■□□□□ 0.65
TSC2-222ENST00000568454 MAP3K1Q13233 1512 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 GOLIM4O00461 696 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 USP5P45974 858 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 TMCO5BA8MYB1 307 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 UBASH3AP57075 661 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 CCT2P78371 535 aaKnown RBP19.09■□□□□ 0.65
TSC2-222ENST00000568454 ANO6Q4KMQ2 910 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 MCM10Q7L590 875 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 LIG1P18858 919 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 AMPD3Q01432 767 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 CEP63Q96MT8 703 aa19.09■□□□□ 0.65
TSC2-222ENST00000568454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.09■□□□□ 0.651e-6■■■■□ 21.9
TSC2-222ENST00000568454 NEBLO76041 1014 aa19.08■□□□□ 0.65
TSC2-222ENST00000568454 NUCB1Q02818 461 aa19.08■□□□□ 0.65
TSC2-222ENST00000568454 CCDC194A0A1B0GVG4 234 aa19.08■□□□□ 0.65
TSC2-222ENST00000568454 OPA1O60313 960 aa19.08■□□□□ 0.64
TSC2-222ENST00000568454 ANAPC15P60006 121 aa19.08■□□□□ 0.64
TSC2-222ENST00000568454 IFI16Q16666 785 aaKnown RBP19.08■□□□□ 0.64
TSC2-222ENST00000568454 IQCA1Q86XH1 822 aa19.08■□□□□ 0.64
TSC2-222ENST00000568454 FEZ1Q99689 392 aa19.08■□□□□ 0.64
TSC2-222ENST00000568454 CTAGE1Q96RT6 745 aa19.07■□□□□ 0.64
TSC2-222ENST00000568454 RBM25P49756 843 aaKnown RBP19.07■□□□□ 0.64
TSC2-222ENST00000568454 CTNNBL1Q8WYA6 563 aaPredicted RBP19.07■□□□□ 0.64
TSC2-222ENST00000568454 CCDC8Q9H0W5 538 aaPredicted RBP19.07■□□□□ 0.64
TSC2-222ENST00000568454 NSRP1Q9H0G5 558 aaKnown RBP19.07■□□□□ 0.64
TSC2-222ENST00000568454 USP16Q9Y5T5 823 aa19.07■□□□□ 0.64
TSC2-222ENST00000568454 FSD2A1L4K1 749 aa19.07■□□□□ 0.64
TSC2-222ENST00000568454 MATR3P43243 847 aaKnown RBP eCLIP19.07■□□□□ 0.64
TSC2-222ENST00000568454 SPATA24Q86W54 205 aa19.07■□□□□ 0.64
TSC2-222ENST00000568454 ORC3Q9UBD5 711 aaPredicted RBP19.07■□□□□ 0.64
TSC2-222ENST00000568454 IARSP41252 1262 aaKnown RBP19.07■□□□□ 0.64
TSC2-222ENST00000568454 NEK1Q96PY6 1258 aa19.07■□□□□ 0.64
TSC2-222ENST00000568454 N4BP3O15049 544 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 TAF7Q15545 349 aaPredicted RBP19.06■□□□□ 0.64
TSC2-222ENST00000568454 USP48Q86UV5 1035 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 LARP6Q9BRS8 491 aaKnown RBP19.06■□□□□ 0.64
TSC2-222ENST00000568454 MIS18AQ9NYP9 233 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 IFIT3O14879 490 aaKnown RBP19.06■□□□□ 0.64
TSC2-222ENST00000568454 MAP3K12Q12852 859 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 IL16Q14005 1332 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 CCDC141Q6ZP82 1450 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 ABCA10Q8WWZ4 1543 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 CYLC1P35663 651 aaPredicted RBP19.06■□□□□ 0.64
TSC2-222ENST00000568454 MCM6Q14566 821 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 GOLGA1Q92805 767 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 A0A087WZG4 1122 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 MINDY4BA8MYZ0 360 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 ABCF2Q9UG63 623 aa19.06■□□□□ 0.64
TSC2-222ENST00000568454 SPAG1Q07617 926 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 SMAP1Q8IYB5 467 aaPredicted RBP19.05■□□□□ 0.64
TSC2-222ENST00000568454 OGFRQ9NZT2 677 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 CAPN2P17655 700 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 NLRP5P59047 1200 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 TNIP1Q15025 636 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 CCDC40Q4G0X9 1142 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 CCDC155Q8N6L0 562 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 F6X3S4 739 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 PPM1EQ8WY54 764 aa19.05■□□□□ 0.64
TSC2-222ENST00000568454 SYKP43405 635 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms