RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 ZC3H4Q9UPT8 1303 aaKnown RBP24.96■■□□□ 1.59
SPSB3-210ENST00000568416 NFKBIEO00221 500 aa24.96■■□□□ 1.59
SPSB3-210ENST00000568416 NPHP1O15259 732 aa24.96■■□□□ 1.59
SPSB3-210ENST00000568416 LMNB1P20700 586 aa24.96■■□□□ 1.59
SPSB3-210ENST00000568416 KDM2BQ8NHM5 1336 aa24.95■■□□□ 1.58
SPSB3-210ENST00000568416 SRGNP10124 158 aa24.95■■□□□ 1.58
SPSB3-210ENST00000568416 NBPF5PQ86XG9 351 aaPredicted RBP24.95■■□□□ 1.58
SPSB3-210ENST00000568416 SBF1O95248 1867 aa24.95■■□□□ 1.58
SPSB3-210ENST00000568416 STYK1Q6J9G0 422 aa24.94■■□□□ 1.58
SPSB3-210ENST00000568416 NIP7Q9Y221 180 aaKnown RBP eCLIP24.94■■□□□ 1.58
SPSB3-210ENST00000568416 C21orf2O43822 256 aa24.93■■□□□ 1.58
SPSB3-210ENST00000568416 RIPK4P57078 832 aa24.93■■□□□ 1.58
SPSB3-210ENST00000568416 HLFQ16534 295 aa24.93■■□□□ 1.58
SPSB3-210ENST00000568416 CNKSR1Q969H4 720 aa24.93■■□□□ 1.58
SPSB3-210ENST00000568416 MASTLQ96GX5 879 aa24.92■■□□□ 1.58
SPSB3-210ENST00000568416 TMPOP42166 694 aaKnown RBP24.91■■□□□ 1.58
SPSB3-210ENST00000568416 TPTE2Q6XPS3 522 aa24.91■■□□□ 1.58
SPSB3-210ENST00000568416 ZNF219Q9P2Y4 722 aaPredicted RBP24.91■■□□□ 1.58
SPSB3-210ENST00000568416 KLRG2A4D1S0 409 aaPredicted RBP24.9■■□□□ 1.58
SPSB3-210ENST00000568416 ERVV-1B6SEH8 477 aa24.9■■□□□ 1.58
SPSB3-210ENST00000568416 NGEFQ8N5V2 710 aa24.9■■□□□ 1.58
SPSB3-210ENST00000568416 RBM46Q8TBY0 533 aaKnown RBP24.9■■□□□ 1.58
SPSB3-210ENST00000568416 RRAGCQ9HB90 399 aa24.9■■□□□ 1.58
SPSB3-210ENST00000568416 TSPYL4Q9UJ04 414 aa24.9■■□□□ 1.58
SPSB3-210ENST00000568416 RRP7AQ9Y3A4 280 aaKnown RBP24.9■■□□□ 1.58
SPSB3-210ENST00000568416 PRPF40BQ6NWY9 871 aaKnown RBP24.89■■□□□ 1.58
SPSB3-210ENST00000568416 BABAM1Q9NWV8 329 aa24.89■■□□□ 1.58
SPSB3-210ENST00000568416 MAP3K15Q6ZN16 1313 aa24.88■■□□□ 1.57
SPSB3-210ENST00000568416 LMOD3Q0VAK6 560 aa24.88■■□□□ 1.57
SPSB3-210ENST00000568416 TTLL7Q6ZT98 887 aa24.88■■□□□ 1.57
SPSB3-210ENST00000568416 C16orf71Q8IYS4 520 aaPredicted RBP24.88■■□□□ 1.57
SPSB3-210ENST00000568416 ERBB4Q15303 1308 aa24.87■■□□□ 1.57
SPSB3-210ENST00000568416 LTBP3Q9NS15 1303 aa24.87■■□□□ 1.57
SPSB3-210ENST00000568416 GLTPD2A6NH11 291 aa24.87■■□□□ 1.57
SPSB3-210ENST00000568416 FAM177BA6PVY3 158 aa24.87■■□□□ 1.57
SPSB3-210ENST00000568416 MYL6BP14649 208 aa24.87■■□□□ 1.57
SPSB3-210ENST00000568416 TNRC6CQ9HCJ0 1690 aaKnown RBP24.87■■□□□ 1.57
SPSB3-210ENST00000568416 NPR1P16066 1061 aa24.86■■□□□ 1.57
SPSB3-210ENST00000568416 KIF6Q6ZMV9 814 aa24.86■■□□□ 1.57
SPSB3-210ENST00000568416 SOGA3Q5TF21 947 aa24.85■■□□□ 1.57
SPSB3-210ENST00000568416 CCDC146Q8IYE0 955 aa24.85■■□□□ 1.57
SPSB3-210ENST00000568416 C7orf43Q8WVR3 580 aa24.85■■□□□ 1.57
SPSB3-210ENST00000568416 ARFGEF2Q9Y6D5 1785 aa24.85■■□□□ 1.57
SPSB3-210ENST00000568416 TIAM2Q8IVF5 1701 aa24.84■■□□□ 1.57
SPSB3-210ENST00000568416 APLP1P51693 650 aa24.84■■□□□ 1.57
SPSB3-210ENST00000568416 TAOK3Q9H2K8 898 aa24.84■■□□□ 1.57
SPSB3-210ENST00000568416 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
SPSB3-210ENST00000568416 FER1L6Q2WGJ9 1857 aa24.83■■□□□ 1.57
SPSB3-210ENST00000568416 FSTL1Q12841 308 aa24.83■■□□□ 1.57
SPSB3-210ENST00000568416 WDR43Q15061 677 aaKnown RBP eCLIP24.83■■□□□ 1.57
SPSB3-210ENST00000568416 LRP10Q7Z4F1 713 aa24.83■■□□□ 1.57
SPSB3-210ENST00000568416 RUNDC1Q96C34 613 aa24.83■■□□□ 1.57
SPSB3-210ENST00000568416 NYXQ9GZU5 481 aa24.83■■□□□ 1.57
SPSB3-210ENST00000568416 PDIA6Q15084 440 aa24.82■■□□□ 1.56
SPSB3-210ENST00000568416 ZBTB3Q9H5J0 574 aa24.82■■□□□ 1.56
SPSB3-210ENST00000568416 PRKRIP1Q9H875 184 aaPredicted RBP24.82■■□□□ 1.56
SPSB3-210ENST00000568416 ABCC12Q96J65 1359 aa24.81■■□□□ 1.56
SPSB3-210ENST00000568416 GTF2E1P29083 439 aaPredicted RBP24.81■■□□□ 1.56
SPSB3-210ENST00000568416 ERFEQ4G0M1 354 aa24.81■■□□□ 1.56
SPSB3-210ENST00000568416 TRIM35Q9UPQ4 493 aa24.81■■□□□ 1.56
SPSB3-210ENST00000568416 UBN2Q6ZU65 1347 aa24.81■■□□□ 1.56
SPSB3-210ENST00000568416 IBTKQ9P2D0 1353 aaPredicted RBP24.8■■□□□ 1.56
SPSB3-210ENST00000568416 NEUROD2Q15784 382 aa24.8■■□□□ 1.56
SPSB3-210ENST00000568416 CCDC93Q567U6 631 aa24.8■■□□□ 1.56
SPSB3-210ENST00000568416 GIGYF2Q6Y7W6 1299 aaKnown RBP24.8■■□□□ 1.56
SPSB3-210ENST00000568416 ZNF34Q8IZ26 560 aa24.8■■□□□ 1.56
SPSB3-210ENST00000568416 ADAMTS8Q9UP79 889 aa24.8■■□□□ 1.56
SPSB3-210ENST00000568416 VEGFAP15692 232 aaPredicted RBP24.79■■□□□ 1.56
SPSB3-210ENST00000568416 EIF2S2P20042 333 aaKnown RBP24.79■■□□□ 1.56
SPSB3-210ENST00000568416 NUTM1Q86Y26 1132 aa24.79■■□□□ 1.56
SPSB3-210ENST00000568416 RIC1Q4ADV7 1423 aa24.78■■□□□ 1.56
SPSB3-210ENST00000568416 CHL1O00533 1208 aa24.78■■□□□ 1.56
SPSB3-210ENST00000568416 GPTP24298 496 aa24.78■■□□□ 1.56
SPSB3-210ENST00000568416 CRY2Q49AN0 593 aa24.78■■□□□ 1.56
SPSB3-210ENST00000568416 SUSD4Q5VX71 490 aa24.78■■□□□ 1.56
SPSB3-210ENST00000568416 DPY19L2Q6NUT2 758 aa24.78■■□□□ 1.56
SPSB3-210ENST00000568416 CACNA1SQ13698 1873 aa24.77■■□□□ 1.56
SPSB3-210ENST00000568416 POTECB2RU33 542 aa24.77■■□□□ 1.56
SPSB3-210ENST00000568416 ALDH1B1P30837 517 aa24.77■■□□□ 1.56
SPSB3-210ENST00000568416 PROSER3Q2NL68 480 aa24.77■■□□□ 1.56
SPSB3-210ENST00000568416 NUP98P52948 1817 aa24.77■■□□□ 1.56
SPSB3-210ENST00000568416 CCDC88AQ3V6T2 1871 aa24.77■■□□□ 1.56
SPSB3-210ENST00000568416 SMC1BQ8NDV3 1235 aa24.76■■□□□ 1.55
SPSB3-210ENST00000568416 WDR90Q96KV7 1748 aa24.75■■□□□ 1.55
SPSB3-210ENST00000568416 NTSR2O95665 410 aa24.75■■□□□ 1.55
SPSB3-210ENST00000568416 ANXA1P04083 346 aa24.75■■□□□ 1.55
SPSB3-210ENST00000568416 FKBP4Q02790 459 aaKnown RBP eCLIP24.75■■□□□ 1.55
SPSB3-210ENST00000568416 DNAJC5GQ8N7S2 189 aa24.75■■□□□ 1.55
SPSB3-210ENST00000568416 OLFM4Q6UX06 510 aa24.74■■□□□ 1.55
SPSB3-210ENST00000568416 DICER1Q9UPY3 1922 aaKnown RBP24.74■■□□□ 1.55
SPSB3-210ENST00000568416 KRT24Q2M2I5 525 aa24.73■■□□□ 1.55
SPSB3-210ENST00000568416 PARP10Q53GL7 1025 aa24.73■■□□□ 1.55
SPSB3-210ENST00000568416 RTKN2Q8IZC4 609 aa24.73■■□□□ 1.55
SPSB3-210ENST00000568416 SNED1Q8TER0 1413 aa24.72■■□□□ 1.55
SPSB3-210ENST00000568416 HOXA10P31260 410 aaPredicted RBP24.72■■□□□ 1.55
SPSB3-210ENST00000568416 PPP1R42Q7Z4L9 355 aa24.72■■□□□ 1.55
SPSB3-210ENST00000568416 NECTIN2Q92692 538 aa24.72■■□□□ 1.55
SPSB3-210ENST00000568416 LAS1LQ9Y4W2 734 aaKnown RBP24.72■■□□□ 1.55
SPSB3-210ENST00000568416 DDNO94850 711 aaPredicted RBP24.71■■□□□ 1.55
SPSB3-210ENST00000568416 COPS6Q7L5N1 327 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms