RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 ORAI2Q96SN7 254 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 PHAXQ9H814 394 aaKnown RBP23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 TMEM51Q9NW97 253 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 PPLO60437 1756 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 CPS1P31327 1500 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 PPFIA3O75145 1194 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 CTNNA3Q9UI47 895 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 CCDC66A2RUB6 948 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 GTF3C6Q969F1 213 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 PDRG1Q9NUG6 133 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 SMTNL1A8MU46 457 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 BECN2A8MW95 431 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 ELF2Q15723 593 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 CBX8Q9HC52 389 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 ZNF215Q9UL58 517 aaPredicted RBP23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 KRT222Q8N1A0 295 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 SNX14Q9Y5W7 946 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 ZNF853P0CG23 659 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 ZNF165P49910 485 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 KRT85P78386 507 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 LGR6Q9HBX8 967 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 ANAPC15P60006 121 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 POLR3GO15318 223 aaPredicted RBP23.47■■□□□ 1.35
AC009041.2-204ENST00000568394 PTPN14Q15678 1187 aa23.47■■□□□ 1.35
AC009041.2-204ENST00000568394 ZFP91Q96JP5 570 aaPredicted RBP23.47■■□□□ 1.35
AC009041.2-204ENST00000568394 ZSCAN25Q6NSZ9 544 aa23.46■■□□□ 1.35
AC009041.2-204ENST00000568394 SPATA32Q96LK8 384 aa23.46■■□□□ 1.35
AC009041.2-204ENST00000568394 CACTINQ8WUQ7 758 aaKnown RBP23.46■■□□□ 1.35
AC009041.2-204ENST00000568394 LMTK2Q8IWU2 1503 aa23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 TAF3Q5VWG9 929 aa23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 RPAP1Q9BWH6 1393 aaPredicted RBP23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 TNNT3P45378 269 aaPredicted RBP23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 TTC6Q86TZ1 520 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 LRRC7Q96NW7 1537 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 PRAMEF22A3QJZ6 481 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 USP27XA6NNY8 438 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 TIGD1Q96MW7 591 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 FMNL2Q96PY5 1086 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 MRVI1Q9Y6F6 885 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 UBTFL1P0CB47 393 aaPredicted RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 CCT4P50991 539 aaKnown RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 USP16Q9Y5T5 823 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 ARHGEF40Q8TER5 1519 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 ATP10DQ9P241 1426 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 ERCC4Q92889 916 aaPredicted RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 DDX11Q96FC9 970 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 MTMR6Q9Y217 621 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 TMEM2Q9UHN6 1383 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 CLTCQ00610 1675 aaKnown RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 RGS12O14924 1447 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 HSPA4P34932 840 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 CERS3Q8IU89 383 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 KIF18AQ8NI77 898 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 DDX41Q9UJV9 622 aaKnown RBP23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 TCHHQ07283 1943 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CSB-PGBD3P0DP91 1061 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CHRNA2Q15822 529 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CDC37L1Q7L3B6 337 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CYP46A1Q9Y6A2 500 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CTIFO43310 598 aaKnown RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 SKILP12757 684 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ARHGEF28Q8N1W1 1705 aaKnown RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ARHGAP31Q2M1Z3 1444 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 IRX5P78411 483 aaPredicted RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ADCK5Q3MIX3 580 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 SLFN14P0C7P3 912 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ZNF75DP51815 510 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 SLC39A6Q13433 755 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 KMT5BQ4FZB7 885 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 CCDC144BQ3MJ40 725 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 CCDC144CPQ8IYA2 1237 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 CNTROBQ8N137 903 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 PAXBP1Q9Y5B6 917 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 GNAI3P08754 354 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 GABPB1Q06547 395 aaPredicted RBP23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 TERF2Q15554 542 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 HOMER1Q86YM7 354 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 SRGAP3O43295 1099 aa23.39■■□□□ 1.34
AC009041.2-204ENST00000568394 PTPRCP08575 1304 aa23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 FAM135BQ49AJ0 1406 aa23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 FAM177A1Q8N128 213 aaPredicted RBP23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 THEMISQ8N1K5 641 aaPredicted RBP23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 TRIM34Q9BYJ4 488 aa23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 MYL6BP14649 208 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 SIL1Q9H173 461 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 GOLGB1Q14789 3259 aaKnown RBP23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 H3BQV1 296 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 ZKSCAN1P17029 563 aaPredicted RBP23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 IFFO2Q5TF58 517 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 OSBPL3Q9H4L5 887 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 FBXO38Q6PIJ6 1188 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 RAB11FIP3O75154 756 aa23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 TEFQ10587 303 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms