RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 ORAI2Q96SN7 254 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 PHAXQ9H814 394 aaKnown RBP23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 TMEM51Q9NW97 253 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 PPLO60437 1756 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 CPS1P31327 1500 aa23.5■■□□□ 1.35
AC009041.2-204ENST00000568394 PPFIA3O75145 1194 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 CTNNA3Q9UI47 895 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 CCDC66A2RUB6 948 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 RUFY3Q7L099 469 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 GTF3C6Q969F1 213 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 PDRG1Q9NUG6 133 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 SMTNL1A8MU46 457 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 BECN2A8MW95 431 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 ELF2Q15723 593 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 CBX8Q9HC52 389 aa23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 ZNF215Q9UL58 517 aaPredicted RBP23.49■■□□□ 1.35
AC009041.2-204ENST00000568394 KRT222Q8N1A0 295 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 SNX14Q9Y5W7 946 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 ZNF853P0CG23 659 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 ZNF165P49910 485 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 KRT85P78386 507 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 LGR6Q9HBX8 967 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 ANAPC15P60006 121 aa23.48■■□□□ 1.35
AC009041.2-204ENST00000568394 POLR3GO15318 223 aaPredicted RBP23.47■■□□□ 1.35
AC009041.2-204ENST00000568394 PTPN14Q15678 1187 aa23.47■■□□□ 1.35
AC009041.2-204ENST00000568394 ZFP91Q96JP5 570 aaPredicted RBP23.47■■□□□ 1.35
AC009041.2-204ENST00000568394 ZSCAN25Q6NSZ9 544 aa23.46■■□□□ 1.35
AC009041.2-204ENST00000568394 SPATA32Q96LK8 384 aa23.46■■□□□ 1.35
AC009041.2-204ENST00000568394 CACTINQ8WUQ7 758 aaKnown RBP23.46■■□□□ 1.35
AC009041.2-204ENST00000568394 LMTK2Q8IWU2 1503 aa23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 TAF3Q5VWG9 929 aa23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 RPAP1Q9BWH6 1393 aaPredicted RBP23.45■■□□□ 1.34
AC009041.2-204ENST00000568394 TNNT3P45378 269 aaPredicted RBP23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 TTC6Q86TZ1 520 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 LRRC7Q96NW7 1537 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 PRAMEF22A3QJZ6 481 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 USP27XA6NNY8 438 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 TIGD1Q96MW7 591 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 FMNL2Q96PY5 1086 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 MRVI1Q9Y6F6 885 aa23.44■■□□□ 1.34
AC009041.2-204ENST00000568394 UBTFL1P0CB47 393 aaPredicted RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 CCT4P50991 539 aaKnown RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 USP16Q9Y5T5 823 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 ARHGEF40Q8TER5 1519 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 ATP10DQ9P241 1426 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 ERCC4Q92889 916 aaPredicted RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 DDX11Q96FC9 970 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 MTMR6Q9Y217 621 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 TMEM2Q9UHN6 1383 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 CLTCQ00610 1675 aaKnown RBP23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 RGS12O14924 1447 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 HSPA4P34932 840 aa23.43■■□□□ 1.34
AC009041.2-204ENST00000568394 CERS3Q8IU89 383 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 KIF18AQ8NI77 898 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 DDX41Q9UJV9 622 aaKnown RBP23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 TCHHQ07283 1943 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CSB-PGBD3P0DP91 1061 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CHRNA2Q15822 529 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CDC37L1Q7L3B6 337 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CYP46A1Q9Y6A2 500 aa23.42■■□□□ 1.34
AC009041.2-204ENST00000568394 CTIFO43310 598 aaKnown RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 SKILP12757 684 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 HDGFL1Q5TGJ6 251 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ARHGEF28Q8N1W1 1705 aaKnown RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ARHGAP31Q2M1Z3 1444 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 IRX5P78411 483 aaPredicted RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ADCK5Q3MIX3 580 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ZC3H13Q5T200 1668 aaKnown RBP23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 SLFN14P0C7P3 912 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 ZNF75DP51815 510 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 SLC39A6Q13433 755 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 KMT5BQ4FZB7 885 aa23.41■■□□□ 1.34
AC009041.2-204ENST00000568394 CCDC144BQ3MJ40 725 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 CCDC144CPQ8IYA2 1237 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 CNTROBQ8N137 903 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 PAXBP1Q9Y5B6 917 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 GNAI3P08754 354 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 GABPB1Q06547 395 aaPredicted RBP23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 TERF2Q15554 542 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 HOMER1Q86YM7 354 aa23.4■■□□□ 1.34
AC009041.2-204ENST00000568394 SRGAP3O43295 1099 aa23.39■■□□□ 1.34
AC009041.2-204ENST00000568394 PTPRCP08575 1304 aa23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 FAM135BQ49AJ0 1406 aa23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 HSP90B1P14625 803 aaKnown RBP23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 FAM177A1Q8N128 213 aaPredicted RBP23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 THEMISQ8N1K5 641 aaPredicted RBP23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 TRIM34Q9BYJ4 488 aa23.39■■□□□ 1.33
AC009041.2-204ENST00000568394 MYL6BP14649 208 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 SIL1Q9H173 461 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 GOLGB1Q14789 3259 aaKnown RBP23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 H3BQV1 296 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 ZKSCAN1P17029 563 aaPredicted RBP23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 IFFO2Q5TF58 517 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 OSBPL3Q9H4L5 887 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 FBXO38Q6PIJ6 1188 aa23.38■■□□□ 1.33
AC009041.2-204ENST00000568394 RAB11FIP3O75154 756 aa23.37■■□□□ 1.33
AC009041.2-204ENST00000568394 TEFQ10587 303 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms