RNA–Protein interactions for RNA: ENST00000568369.5

FANCA-230, Transcript of FA complementation group A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FANCA, Length 4,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-230ENST00000568369 SKIDA1Q1XH10 827 aa12.35□□□□□ -0.43
FANCA-230ENST00000568369 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
FANCA-230ENST00000568369 KIAA1328Q86T90 577 aa12.35□□□□□ -0.43
FANCA-230ENST00000568369 ZKSCAN5Q9Y2L8 839 aa12.35□□□□□ -0.43
FANCA-230ENST00000568369 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
FANCA-230ENST00000568369 ZHX3Q9H4I2 956 aa12.35□□□□□ -0.43
FANCA-230ENST00000568369 COL17A1Q9UMD9 1497 aaPredicted RBP12.35□□□□□ -0.43
FANCA-230ENST00000568369 KIF5CO60282 957 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 KIAA0754O94854 1291 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 POLKQ9UBT6 870 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 KLHL10Q6JEL2 608 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 CCDC148Q8NFR7 591 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
FANCA-230ENST00000568369 UHRF1BP1Q6BDS2 1440 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 ERICH4A6NGS2 130 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 C16orf71Q8IYS4 520 aaPredicted RBP12.34□□□□□ -0.43
FANCA-230ENST00000568369 NPC1L1Q9UHC9 1359 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 CTTNBP2Q8WZ74 1663 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 ATP2B2Q01814 1243 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 MAP3K12Q12852 859 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 HS1BP3Q53T59 392 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 FAM200AQ8TCP9 573 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 PHAXQ9H814 394 aaKnown RBP12.34□□□□□ -0.43
FANCA-230ENST00000568369 SYCP2Q9BX26 1530 aa12.34□□□□□ -0.43
FANCA-230ENST00000568369 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.44
FANCA-230ENST00000568369 ORC3Q9UBD5 711 aaPredicted RBP12.33□□□□□ -0.44
FANCA-230ENST00000568369 SLC12A7Q9Y666 1083 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 GOLIM4O00461 696 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 CNPY2Q9Y2B0 182 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 USP16Q9Y5T5 823 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 FOXO3O43524 673 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 SSBP05455 408 aaKnown RBP eCLIP12.33□□□□□ -0.44
FANCA-230ENST00000568369 NOLC1Q14978 699 aaKnown RBP eCLIP12.33□□□□□ -0.44
FANCA-230ENST00000568369 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 PRDM10Q9NQV6 1147 aa12.33□□□□□ -0.44
FANCA-230ENST00000568369 PZPP20742 1482 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 MINDY4BA8MYZ0 360 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 CEP85Q6P2H3 762 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 PLEKHM2Q8IWE5 1019 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 TSPYL6Q8N831 410 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 PAXBP1Q9Y5B6 917 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 UBE3BQ7Z3V4 1068 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 ZNF397Q8NF99 534 aaPredicted RBP12.32□□□□□ -0.44
FANCA-230ENST00000568369 SHANK2Q9UPX8 1470 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 GOLGA8AA7E2F4 631 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 BIN1O00499 593 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 ANXA1P04083 346 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 CASQ1P31415 396 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 BRF1Q92994 677 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 INTS4Q96HW7 963 aaKnown RBP12.32□□□□□ -0.44
FANCA-230ENST00000568369 RNF41Q9H4P4 317 aaPredicted RBP12.32□□□□□ -0.44
FANCA-230ENST00000568369 INSRP06213 1382 aa12.32□□□□□ -0.44
FANCA-230ENST00000568369 IFIT3O14879 490 aaKnown RBP12.31□□□□□ -0.44
FANCA-230ENST00000568369 F13A1P00488 732 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
FANCA-230ENST00000568369 CTCFLQ8NI51 663 aaPredicted RBP12.31□□□□□ -0.44
FANCA-230ENST00000568369 PIBF1Q8WXW3 757 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 RBM8AQ9Y5S9 174 aaKnown RBP12.31□□□□□ -0.44
FANCA-230ENST00000568369 RBM25P49756 843 aaKnown RBP12.31□□□□□ -0.44
FANCA-230ENST00000568369 IQCA1Q86XH1 822 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 CCDC82Q8N4S0 544 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 GOLGA6L9A6NEM1 432 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 IARSP41252 1262 aaKnown RBP12.31□□□□□ -0.44
FANCA-230ENST00000568369 FAM193AP78312 1265 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 HSP90AB3PQ58FF7 597 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 ALDH1L1O75891 902 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 SNW1Q13573 536 aaKnown RBP12.31□□□□□ -0.44
FANCA-230ENST00000568369 JAKMIP3Q5VZ66 844 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
FANCA-230ENST00000568369 SSRP1Q08945 709 aaKnown RBP12.3□□□□□ -0.44
FANCA-230ENST00000568369 MAP9Q49MG5 647 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 PPP4R3BQ5MIZ7 849 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 TEX14Q8IWB6 1497 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 SPA17Q15506 151 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 CCDC150Q8NCX0 1101 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
FANCA-230ENST00000568369 WDR62O43379 1518 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 POLR3DP05423 398 aaPredicted RBP12.3□□□□□ -0.44
FANCA-230ENST00000568369 CCDC102BQ68D86 513 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 ZGPATQ8N5A5 531 aaKnown RBP12.3□□□□□ -0.44
FANCA-230ENST00000568369 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 TAF4BQ92750 862 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 USP26Q9BXU7 913 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 CENPHQ9H3R5 247 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 DACT1Q9NYF0 836 aa12.3□□□□□ -0.44
FANCA-230ENST00000568369 ZMYM4Q5VZL5 1548 aa12.29□□□□□ -0.44
FANCA-230ENST00000568369 UNC13AQ9UPW8 1703 aa12.29□□□□□ -0.44
FANCA-230ENST00000568369 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
FANCA-230ENST00000568369 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
FANCA-230ENST00000568369 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
FANCA-230ENST00000568369 CEP135Q66GS9 1140 aa12.29□□□□□ -0.44
FANCA-230ENST00000568369 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
FANCA-230ENST00000568369 TCEANC2Q96MN5 208 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms