RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 MSL1Q68DK7 614 aa23.1■■□□□ 1.29
COMMD4-222ENST00000568034 MTFR1LQ9H019 292 aa23.1■■□□□ 1.29
COMMD4-222ENST00000568034 RARSP54136 660 aaKnown RBP23.09■■□□□ 1.29
COMMD4-222ENST00000568034 AIMP1Q12904 312 aaKnown RBP23.09■■□□□ 1.29
COMMD4-222ENST00000568034 NPM2Q86SE8 214 aaKnown RBP23.09■■□□□ 1.29
COMMD4-222ENST00000568034 MRPL50Q8N5N7 158 aaKnown RBP23.09■■□□□ 1.29
COMMD4-222ENST00000568034 ERVV-1B6SEH8 477 aa23.08■■□□□ 1.29
COMMD4-222ENST00000568034 RGL2O15211 777 aa23.08■■□□□ 1.29
COMMD4-222ENST00000568034 HLFQ16534 295 aa23.08■■□□□ 1.29
COMMD4-222ENST00000568034 ALDH1L2Q3SY69 923 aa23.08■■□□□ 1.29
COMMD4-222ENST00000568034 ARXQ96QS3 562 aa23.08■■□□□ 1.29
COMMD4-222ENST00000568034 SGIP1Q9BQI5 828 aa23.08■■□□□ 1.29
COMMD4-222ENST00000568034 ZBTB3Q9H5J0 574 aa23.08■■□□□ 1.29
COMMD4-222ENST00000568034 FLIIQ13045 1269 aa23.07■■□□□ 1.28
COMMD4-222ENST00000568034 KIF6Q6ZMV9 814 aa23.07■■□□□ 1.28
COMMD4-222ENST00000568034 BCL2L13Q9BXK5 485 aa23.07■■□□□ 1.28
COMMD4-222ENST00000568034 ARFGEF2Q9Y6D5 1785 aa23.06■■□□□ 1.28
COMMD4-222ENST00000568034 NUP98P52948 1817 aa23.06■■□□□ 1.28
COMMD4-222ENST00000568034 ATF5Q9Y2D1 282 aaPredicted RBP23.06■■□□□ 1.28
COMMD4-222ENST00000568034 PTGER2P43116 358 aa23.05■■□□□ 1.28
COMMD4-222ENST00000568034 CLEC4GQ6UXB4 293 aa23.05■■□□□ 1.28
COMMD4-222ENST00000568034 PLBD2Q8NHP8 589 aa23.05■■□□□ 1.28
COMMD4-222ENST00000568034 ATP10DQ9P241 1426 aa23.05■■□□□ 1.28
COMMD4-222ENST00000568034 ADCY9O60503 1353 aa23.04■■□□□ 1.28
COMMD4-222ENST00000568034 BRPF1P55201 1214 aaPredicted RBP23.04■■□□□ 1.28
COMMD4-222ENST00000568034 TBC1D9BQ66K14 1250 aa23.04■■□□□ 1.28
COMMD4-222ENST00000568034 GIGYF2Q6Y7W6 1299 aaKnown RBP23.04■■□□□ 1.28
COMMD4-222ENST00000568034 ANKRD13DQ6ZTN6 518 aa23.04■■□□□ 1.28
COMMD4-222ENST00000568034 NLGN1Q8N2Q7 840 aa23.04■■□□□ 1.28
COMMD4-222ENST00000568034 SMC4Q9NTJ3 1288 aa23.04■■□□□ 1.28
COMMD4-222ENST00000568034 SRCAPQ6ZRS2 3230 aa23.04■■□□□ 1.28
COMMD4-222ENST00000568034 TM4SF1P30408 202 aa23.03■■□□□ 1.28
COMMD4-222ENST00000568034 DDR1Q08345 913 aa23.03■■□□□ 1.28
COMMD4-222ENST00000568034 NFIXQ14938 502 aa23.03■■□□□ 1.28
COMMD4-222ENST00000568034 ANKRD36CQ5JPF3 1778 aa23.02■■□□□ 1.28
COMMD4-222ENST00000568034 ZNF652Q9Y2D9 606 aa23.02■■□□□ 1.28
COMMD4-222ENST00000568034 MMP10P09238 476 aa23.01■■□□□ 1.27
COMMD4-222ENST00000568034 SPON1Q9HCB6 807 aa23.01■■□□□ 1.27
COMMD4-222ENST00000568034 LRP5O75197 1615 aa23■■□□□ 1.27
COMMD4-222ENST00000568034 PI4KAP2A4QPH2 592 aa23■■□□□ 1.27
COMMD4-222ENST00000568034 BCAR3O75815 825 aa23■■□□□ 1.27
COMMD4-222ENST00000568034 KSR2Q6VAB6 950 aa23■■□□□ 1.27
COMMD4-222ENST00000568034 PI4KAP1Q8N8J0 262 aa23■■□□□ 1.27
COMMD4-222ENST00000568034 NRXN2Q9P2S2 1712 aa22.99■■□□□ 1.27
COMMD4-222ENST00000568034 POLRMTO00411 1230 aaKnown RBP22.99■■□□□ 1.27
COMMD4-222ENST00000568034 DDX58O95786 925 aaKnown RBP22.99■■□□□ 1.27
COMMD4-222ENST00000568034 FKBP5Q13451 457 aaPredicted RBP22.99■■□□□ 1.27
COMMD4-222ENST00000568034 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
COMMD4-222ENST00000568034 UBN2Q6ZU65 1347 aa22.99■■□□□ 1.27
COMMD4-222ENST00000568034 TCIRG1Q13488 830 aa22.98■■□□□ 1.27
COMMD4-222ENST00000568034 BICDL1Q6ZP65 573 aa22.98■■□□□ 1.27
COMMD4-222ENST00000568034 RIC3Q7Z5B4 369 aa22.98■■□□□ 1.27
COMMD4-222ENST00000568034 MAP3K2Q9Y2U5 619 aa22.98■■□□□ 1.27
COMMD4-222ENST00000568034 AFDNP55196 1824 aaKnown RBP22.97■■□□□ 1.27
COMMD4-222ENST00000568034 ISCA1Q9BUE6 129 aa22.97■■□□□ 1.27
COMMD4-222ENST00000568034 METTL22Q9BUU2 404 aaPredicted RBP22.97■■□□□ 1.27
COMMD4-222ENST00000568034 NIP7Q9Y221 180 aaKnown RBP eCLIP22.97■■□□□ 1.27
COMMD4-222ENST00000568034 PTPRCP08575 1304 aa22.97■■□□□ 1.27
COMMD4-222ENST00000568034 CARMIL3Q8ND23 1372 aa22.97■■□□□ 1.27
COMMD4-222ENST00000568034 F6X3S4 739 aa22.96■■□□□ 1.27
COMMD4-222ENST00000568034 GPTP24298 496 aa22.96■■□□□ 1.27
COMMD4-222ENST00000568034 HSP90AB3PQ58FF7 597 aa22.96■■□□□ 1.27
COMMD4-222ENST00000568034 NOB1Q9ULX3 412 aaKnown RBP22.96■■□□□ 1.27
COMMD4-222ENST00000568034 POLD1P28340 1107 aa22.95■■□□□ 1.26
COMMD4-222ENST00000568034 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.26
COMMD4-222ENST00000568034 SETDB2Q96T68 719 aa22.95■■□□□ 1.26
COMMD4-222ENST00000568034 RCAN3Q9UKA8 241 aa22.95■■□□□ 1.26
COMMD4-222ENST00000568034 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
COMMD4-222ENST00000568034 MYD88Q99836 296 aa22.94■■□□□ 1.26
COMMD4-222ENST00000568034 IBTKQ9P2D0 1353 aaPredicted RBP22.93■■□□□ 1.26
COMMD4-222ENST00000568034 ATP5J2-PTCD1G3V325 749 aa22.93■■□□□ 1.26
COMMD4-222ENST00000568034 SERPINB2P05120 415 aa22.93■■□□□ 1.26
COMMD4-222ENST00000568034 IGKV5-2P06315 115 aa22.93■■□□□ 1.26
COMMD4-222ENST00000568034 NLRP10Q86W26 655 aa22.93■■□□□ 1.26
COMMD4-222ENST00000568034 PARP3Q9Y6F1 533 aa22.93■■□□□ 1.26
COMMD4-222ENST00000568034 C10orf71Q711Q0 1435 aa22.92■■□□□ 1.26
COMMD4-222ENST00000568034 TRIM28Q13263 835 aaKnown RBP22.92■■□□□ 1.26
COMMD4-222ENST00000568034 SUSD4Q5VX71 490 aa22.92■■□□□ 1.26
COMMD4-222ENST00000568034 NTSR2O95665 410 aa22.91■■□□□ 1.26
COMMD4-222ENST00000568034 PARP10Q53GL7 1025 aa22.91■■□□□ 1.26
COMMD4-222ENST00000568034 ARHGAP45Q92619 1136 aa22.91■■□□□ 1.26
COMMD4-222ENST00000568034 PXDNLA1KZ92 1463 aa22.91■■□□□ 1.26
COMMD4-222ENST00000568034 KIF13BQ9NQT8 1826 aa22.9■■□□□ 1.26
COMMD4-222ENST00000568034 BEND3Q5T5X7 828 aa22.9■■□□□ 1.26
COMMD4-222ENST00000568034 PRR5LQ6MZQ0 368 aa22.9■■□□□ 1.26
COMMD4-222ENST00000568034 TNNQ9UQP3 1299 aa22.9■■□□□ 1.26
COMMD4-222ENST00000568034 N4BP2Q86UW6 1770 aaPredicted RBP22.9■■□□□ 1.26
COMMD4-222ENST00000568034 CWF19L2Q2TBE0 894 aaKnown RBP22.89■■□□□ 1.25
COMMD4-222ENST00000568034 ABCC12Q96J65 1359 aa22.89■■□□□ 1.25
COMMD4-222ENST00000568034 FAM177BA6PVY3 158 aa22.88■■□□□ 1.25
COMMD4-222ENST00000568034 NEURL1BA8MQ27 555 aa22.88■■□□□ 1.25
COMMD4-222ENST00000568034 TRIM27P14373 513 aa22.88■■□□□ 1.25
COMMD4-222ENST00000568034 LINS1Q8NG48 757 aa22.88■■□□□ 1.25
COMMD4-222ENST00000568034 API5Q9BZZ5 524 aaKnown RBP22.88■■□□□ 1.25
COMMD4-222ENST00000568034 ABCC4O15439 1325 aa22.87■■□□□ 1.25
COMMD4-222ENST00000568034 ATF7IPQ6VMQ6 1270 aa22.87■■□□□ 1.25
COMMD4-222ENST00000568034 NBPF5PQ86XG9 351 aaPredicted RBP22.87■■□□□ 1.25
COMMD4-222ENST00000568034 CNBD1Q8NA66 436 aa22.87■■□□□ 1.25
COMMD4-222ENST00000568034 CCDC191Q8NCU4 936 aa22.87■■□□□ 1.25
COMMD4-222ENST00000568034 FRAT1Q92837 279 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms