RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 PARD3Q8TEW0 1356 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 COPS2P61201 443 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 VAC14Q08AM6 782 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 MSS51Q4VC12 460 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 SIRT1Q96EB6 747 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 PRAM1Q96QH2 718 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 PRDM11Q9NQV5 511 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 TRPM3Q9HCF6 1732 aaPredicted RBP12.84□□□□□ -0.35
CFDP1-206ENST00000566254 SPATA31A1Q5TZJ5 1347 aa12.84□□□□□ -0.35
CFDP1-206ENST00000566254 POTEMA6NI47 508 aa12.83□□□□□ -0.36
CFDP1-206ENST00000566254 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
CFDP1-206ENST00000566254 PTPRNQ16849 979 aa12.83□□□□□ -0.36
CFDP1-206ENST00000566254 FAM160A2Q8N612 972 aaPredicted RBP12.83□□□□□ -0.36
CFDP1-206ENST00000566254 ADAMTS19Q8TE59 1207 aa12.83□□□□□ -0.36
CFDP1-206ENST00000566254 SPSB2Q99619 263 aa12.83□□□□□ -0.36
CFDP1-206ENST00000566254 SPON1Q9HCB6 807 aa12.83□□□□□ -0.36
CFDP1-206ENST00000566254 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 NBPF8Q3BBV2 869 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 RREB1Q92766 1687 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 ALS2Q96Q42 1657 aa12.82□□□□□ -0.36
CFDP1-206ENST00000566254 ACIN1Q9UKV3 1341 aaKnown RBP12.82□□□□□ -0.36
CFDP1-206ENST00000566254 GPRASP1Q5JY77 1395 aa12.81□□□□□ -0.36
CFDP1-206ENST00000566254 KCNQ2O43526 872 aa12.81□□□□□ -0.36
CFDP1-206ENST00000566254 CHRNA2Q15822 529 aa12.81□□□□□ -0.36
CFDP1-206ENST00000566254 CFAP70Q5T0N1 1121 aa12.81□□□□□ -0.36
CFDP1-206ENST00000566254 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
CFDP1-206ENST00000566254 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
CFDP1-206ENST00000566254 C14orf93Q9H972 538 aaKnown RBP12.81□□□□□ -0.36
CFDP1-206ENST00000566254 DHX57Q6P158 1386 aaKnown RBP12.81□□□□□ -0.36
CFDP1-206ENST00000566254 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
CFDP1-206ENST00000566254 PNMA1Q8ND90 353 aa12.8□□□□□ -0.36
CFDP1-206ENST00000566254 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
CFDP1-206ENST00000566254 KIAA0232Q92628 1395 aa12.8□□□□□ -0.36
CFDP1-206ENST00000566254 CAMTA1Q9Y6Y1 1673 aa12.8□□□□□ -0.36
CFDP1-206ENST00000566254 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
CFDP1-206ENST00000566254 DXOO77932 396 aaKnown RBP12.79□□□□□ -0.36
CFDP1-206ENST00000566254 MMP16P51512 607 aa12.79□□□□□ -0.36
CFDP1-206ENST00000566254 POGKQ9P215 609 aa12.79□□□□□ -0.36
CFDP1-206ENST00000566254 MAP10Q9P2G4 905 aa12.79□□□□□ -0.36
CFDP1-206ENST00000566254 PRR36Q9H6K5 1346 aa12.79□□□□□ -0.36
CFDP1-206ENST00000566254 ZPR1O75312 459 aa12.78□□□□□ -0.36
CFDP1-206ENST00000566254 PDE3BQ13370 1112 aa12.78□□□□□ -0.36
CFDP1-206ENST00000566254 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
CFDP1-206ENST00000566254 ZC3H6P61129 1189 aaKnown RBP12.77□□□□□ -0.37
CFDP1-206ENST00000566254 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
CFDP1-206ENST00000566254 MTRQ99707 1265 aa12.77□□□□□ -0.37
CFDP1-206ENST00000566254 ALG2Q9H553 416 aa12.77□□□□□ -0.37
CFDP1-206ENST00000566254 FKBPLQ9UIM3 349 aa12.77□□□□□ -0.37
CFDP1-206ENST00000566254 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
CFDP1-206ENST00000566254 TLL1O43897 1013 aa12.76□□□□□ -0.37
CFDP1-206ENST00000566254 PTPN5P54829 565 aa12.76□□□□□ -0.37
CFDP1-206ENST00000566254 NGDNQ8NEJ9 315 aaKnown RBP12.76□□□□□ -0.37
CFDP1-206ENST00000566254 PRDM9Q9NQV7 894 aa12.76□□□□□ -0.37
CFDP1-206ENST00000566254 ADH1BP00325 375 aa12.75□□□□□ -0.37
CFDP1-206ENST00000566254 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
CFDP1-206ENST00000566254 SSH2Q76I76 1423 aa12.75□□□□□ -0.37
CFDP1-206ENST00000566254 DLC1Q96QB1 1528 aa12.75□□□□□ -0.37
CFDP1-206ENST00000566254 EVA1BQ9NVM1 165 aa12.75□□□□□ -0.37
CFDP1-206ENST00000566254 TULP4Q9NRJ4 1543 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 CTHP32929 405 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 SOX11P35716 441 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 EVA1CP58658 441 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 TJAP1Q5JTD0 557 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 NUTM2GQ5VZR2 741 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 LARP1Q6PKG0 1096 aaKnown RBP12.74□□□□□ -0.37
CFDP1-206ENST00000566254 NUDT12Q9BQG2 462 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
CFDP1-206ENST00000566254 NRKQ7Z2Y5 1582 aa12.73□□□□□ -0.37
CFDP1-206ENST00000566254 ZC3H4Q9UPT8 1303 aaKnown RBP12.73□□□□□ -0.37
CFDP1-206ENST00000566254 PDGFDQ9GZP0 370 aaPredicted RBP12.73□□□□□ -0.37
CFDP1-206ENST00000566254 PHRF1Q9P1Y6 1649 aaKnown RBP12.73□□□□□ -0.37
CFDP1-206ENST00000566254 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
CFDP1-206ENST00000566254 WASLO00401 505 aaPredicted RBP12.72□□□□□ -0.37
CFDP1-206ENST00000566254 FBXO45P0C2W1 286 aa12.72□□□□□ -0.37
CFDP1-206ENST00000566254 NR1H3Q13133 447 aa12.72□□□□□ -0.37
CFDP1-206ENST00000566254 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
CFDP1-206ENST00000566254 ZNF516Q92618 1163 aa12.72□□□□□ -0.37
CFDP1-206ENST00000566254 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
CFDP1-206ENST00000566254 IL21Q9HBE4 155 aa12.72□□□□□ -0.37
CFDP1-206ENST00000566254 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
CFDP1-206ENST00000566254 KCNH2Q12809 1159 aa12.71□□□□□ -0.37
CFDP1-206ENST00000566254 ADGRB1O14514 1584 aa12.7□□□□□ -0.38
CFDP1-206ENST00000566254 ZBBXA8MT70 800 aa12.7□□□□□ -0.38
CFDP1-206ENST00000566254 CASZ1Q86V15 1759 aa12.69□□□□□ -0.38
CFDP1-206ENST00000566254 C1QTNF8P60827 252 aa12.69□□□□□ -0.38
CFDP1-206ENST00000566254 EIF4G2P78344 907 aaKnown RBP eCLIP12.69□□□□□ -0.38
CFDP1-206ENST00000566254 SEMA3FQ13275 785 aa12.69□□□□□ -0.38
CFDP1-206ENST00000566254 IFFO2Q5TF58 517 aa12.69□□□□□ -0.38
CFDP1-206ENST00000566254 MYOM1P52179 1685 aa12.69□□□□□ -0.38
CFDP1-206ENST00000566254 ATP7BP35670 1465 aa12.68□□□□□ -0.38
CFDP1-206ENST00000566254 PTF1AQ7RTS3 328 aa12.68□□□□□ -0.38
CFDP1-206ENST00000566254 PLSCR1O15162 318 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 ARMC2Q8NEN0 867 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 UCN2Q96RP3 112 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms