RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 KDM2BQ8NHM5 1336 aa16.97■□□□□ 0.31
TNRC6A-211ENST00000566108 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
TNRC6A-211ENST00000566108 PIP4K2AP48426 406 aaPredicted RBP16.97■□□□□ 0.31
TNRC6A-211ENST00000566108 RIPK4P57078 832 aa16.97■□□□□ 0.31
TNRC6A-211ENST00000566108 PRR5LQ6MZQ0 368 aa16.97■□□□□ 0.31
TNRC6A-211ENST00000566108 KIF6Q6ZMV9 814 aa16.97■□□□□ 0.31
TNRC6A-211ENST00000566108 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
TNRC6A-211ENST00000566108 GTF2E1P29083 439 aaPredicted RBP16.96■□□□□ 0.31
TNRC6A-211ENST00000566108 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
TNRC6A-211ENST00000566108 TPTE2Q6XPS3 522 aa16.95■□□□□ 0.3
TNRC6A-211ENST00000566108 CNKSR1Q969H4 720 aa16.95■□□□□ 0.3
TNRC6A-211ENST00000566108 NIP7Q9Y221 180 aaKnown RBP eCLIP16.95■□□□□ 0.3
TNRC6A-211ENST00000566108 ZC3H4Q9UPT8 1303 aaKnown RBP16.95■□□□□ 0.3
TNRC6A-211ENST00000566108 LMNB1P20700 586 aa16.94■□□□□ 0.3
TNRC6A-211ENST00000566108 SOGA3Q5TF21 947 aa16.94■□□□□ 0.3
TNRC6A-211ENST00000566108 THUMPD2Q9BTF0 503 aaKnown RBP16.94■□□□□ 0.3
TNRC6A-211ENST00000566108 ANKRD31Q8N7Z5 1873 aa16.94■□□□□ 0.3
TNRC6A-211ENST00000566108 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 EIF4A1P60842 406 aaKnown RBP16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 NGEFQ8N5V2 710 aa16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 BABAM1Q9NWV8 329 aa16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 ERBB4Q15303 1308 aa16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 SBF1O95248 1867 aa16.93■□□□□ 0.3
TNRC6A-211ENST00000566108 TMPOP42166 694 aaKnown RBP16.92■□□□□ 0.3
TNRC6A-211ENST00000566108 STYK1Q6J9G0 422 aa16.92■□□□□ 0.3
TNRC6A-211ENST00000566108 CCDC24Q8N4L8 307 aa16.92■□□□□ 0.3
TNRC6A-211ENST00000566108 MASTLQ96GX5 879 aa16.92■□□□□ 0.3
TNRC6A-211ENST00000566108 NYXQ9GZU5 481 aa16.92■□□□□ 0.3
TNRC6A-211ENST00000566108 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
TNRC6A-211ENST00000566108 KIF3CO14782 793 aa16.91■□□□□ 0.3
TNRC6A-211ENST00000566108 TOMM70O94826 608 aa16.91■□□□□ 0.3
TNRC6A-211ENST00000566108 MYL6BP14649 208 aa16.91■□□□□ 0.3
TNRC6A-211ENST00000566108 ZEB1P37275 1124 aaPredicted RBP16.91■□□□□ 0.3
TNRC6A-211ENST00000566108 RASSF7Q02833 373 aa16.91■□□□□ 0.3
TNRC6A-211ENST00000566108 RUNDC1Q96C34 613 aa16.91■□□□□ 0.3
TNRC6A-211ENST00000566108 COL11A2P13942 1736 aaPredicted RBP16.9■□□□□ 0.3
TNRC6A-211ENST00000566108 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
TNRC6A-211ENST00000566108 HSPA6P17066 643 aa16.9■□□□□ 0.3
TNRC6A-211ENST00000566108 NEUROD2Q15784 382 aa16.9■□□□□ 0.3
TNRC6A-211ENST00000566108 ZNF219Q9P2Y4 722 aaPredicted RBP16.9■□□□□ 0.3
TNRC6A-211ENST00000566108 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
TNRC6A-211ENST00000566108 CACNA1SQ13698 1873 aa16.9■□□□□ 0.3
TNRC6A-211ENST00000566108 FAM177BA6PVY3 158 aa16.89■□□□□ 0.29
TNRC6A-211ENST00000566108 C21orf2O43822 256 aa16.89■□□□□ 0.29
TNRC6A-211ENST00000566108 SRGNP10124 158 aa16.89■□□□□ 0.29
TNRC6A-211ENST00000566108 NPR1P16066 1061 aa16.89■□□□□ 0.29
TNRC6A-211ENST00000566108 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
TNRC6A-211ENST00000566108 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.29
TNRC6A-211ENST00000566108 MAP3K15Q6ZN16 1313 aa16.89■□□□□ 0.29
TNRC6A-211ENST00000566108 DPY19L2Q6NUT2 758 aa16.88■□□□□ 0.29
TNRC6A-211ENST00000566108 PRPF40BQ6NWY9 871 aaKnown RBP16.88■□□□□ 0.29
TNRC6A-211ENST00000566108 TAOK3Q9H2K8 898 aa16.88■□□□□ 0.29
TNRC6A-211ENST00000566108 CCDC88AQ3V6T2 1871 aa16.88■□□□□ 0.29
TNRC6A-211ENST00000566108 EIF2S2P20042 333 aaKnown RBP16.87■□□□□ 0.29
TNRC6A-211ENST00000566108 PRKRIP1Q9H875 184 aaPredicted RBP16.87■□□□□ 0.29
TNRC6A-211ENST00000566108 LAS1LQ9Y4W2 734 aaKnown RBP16.87■□□□□ 0.29
TNRC6A-211ENST00000566108 TIAM2Q8IVF5 1701 aa16.87■□□□□ 0.29
TNRC6A-211ENST00000566108 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
TNRC6A-211ENST00000566108 NUP98P52948 1817 aa16.86■□□□□ 0.29
TNRC6A-211ENST00000566108 ALDH1B1P30837 517 aa16.86■□□□□ 0.29
TNRC6A-211ENST00000566108 HLFQ16534 295 aa16.86■□□□□ 0.29
TNRC6A-211ENST00000566108 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
TNRC6A-211ENST00000566108 ZBTB3Q9H5J0 574 aa16.86■□□□□ 0.29
TNRC6A-211ENST00000566108 FER1L6Q2WGJ9 1857 aa16.85■□□□□ 0.29
TNRC6A-211ENST00000566108 APLP1P51693 650 aa16.85■□□□□ 0.29
TNRC6A-211ENST00000566108 CALD1Q05682 793 aaKnown RBP16.85■□□□□ 0.29
TNRC6A-211ENST00000566108 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
TNRC6A-211ENST00000566108 CCDC93Q567U6 631 aa16.85■□□□□ 0.29
TNRC6A-211ENST00000566108 LTBP3Q9NS15 1303 aa16.85■□□□□ 0.29
TNRC6A-211ENST00000566108 GLTPD2A6NH11 291 aa16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 NFKBIEO00221 500 aa16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 PARP10Q53GL7 1025 aa16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 PPP1R42Q7Z4L9 355 aa16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 RRAGCQ9HB90 399 aa16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 IBTKQ9P2D0 1353 aaPredicted RBP16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 SLX4Q8IY92 1834 aa16.84■□□□□ 0.29
TNRC6A-211ENST00000566108 GPTP24298 496 aa16.83■□□□□ 0.28
TNRC6A-211ENST00000566108 FSTL1Q12841 308 aa16.83■□□□□ 0.28
TNRC6A-211ENST00000566108 HSP90AB3PQ58FF7 597 aa16.83■□□□□ 0.28
TNRC6A-211ENST00000566108 TTLL7Q6ZT98 887 aa16.83■□□□□ 0.28
TNRC6A-211ENST00000566108 TMX4Q9H1E5 349 aaPredicted RBP16.83■□□□□ 0.28
TNRC6A-211ENST00000566108 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
TNRC6A-211ENST00000566108 DICER1Q9UPY3 1922 aaKnown RBP16.83■□□□□ 0.28
TNRC6A-211ENST00000566108 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
TNRC6A-211ENST00000566108 GIGYF2Q6Y7W6 1299 aaKnown RBP16.82■□□□□ 0.28
TNRC6A-211ENST00000566108 RTKN2Q8IZC4 609 aa16.82■□□□□ 0.28
TNRC6A-211ENST00000566108 KLRG2A4D1S0 409 aaPredicted RBP16.81■□□□□ 0.28
TNRC6A-211ENST00000566108 SMC1BQ8NDV3 1235 aa16.81■□□□□ 0.28
TNRC6A-211ENST00000566108 CHL1O00533 1208 aa16.8■□□□□ 0.28
TNRC6A-211ENST00000566108 HOXB7P09629 217 aa16.8■□□□□ 0.28
TNRC6A-211ENST00000566108 NUTM1Q86Y26 1132 aa16.8■□□□□ 0.28
TNRC6A-211ENST00000566108 RNF123Q5XPI4 1314 aa16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 AIMP1Q12904 312 aaKnown RBP16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 CC2D2BQ6DHV5 1058 aa16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 NECTIN2Q92692 538 aa16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 RBM17Q96I25 401 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms