RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 TOMM70O94826 608 aa14.15□□□□□ -0.14
SF3B3-205ENST00000564899 ZKSCAN2Q63HK3 967 aa14.15□□□□□ -0.14
SF3B3-205ENST00000564899 SMARCC1Q92922 1105 aaPredicted RBP14.15□□□□□ -0.14
SF3B3-205ENST00000564899 SLC4A9Q96Q91 983 aa14.15□□□□□ -0.14
SF3B3-205ENST00000564899 NOB1Q9ULX3 412 aaKnown RBP14.15□□□□□ -0.14
SF3B3-205ENST00000564899 IPO8O15397 1037 aaKnown RBP14.14□□□□□ -0.15
SF3B3-205ENST00000564899 CAPN15O75808 1086 aa14.14□□□□□ -0.15
SF3B3-205ENST00000564899 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
SF3B3-205ENST00000564899 FKBP8Q14318 412 aa14.14□□□□□ -0.15
SF3B3-205ENST00000564899 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
SF3B3-205ENST00000564899 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
SF3B3-205ENST00000564899 DPEP1P16444 411 aa14.13□□□□□ -0.15
SF3B3-205ENST00000564899 VSIG10Q8N0Z9 540 aa14.13□□□□□ -0.15
SF3B3-205ENST00000564899 CHPF2Q9P2E5 772 aa14.13□□□□□ -0.15
SF3B3-205ENST00000564899 KCNA3P22001 575 aa14.12□□□□□ -0.15
SF3B3-205ENST00000564899 ATP6V1AP38606 617 aa14.12□□□□□ -0.15
SF3B3-205ENST00000564899 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
SF3B3-205ENST00000564899 ATF7IPQ6VMQ6 1270 aa14.12□□□□□ -0.15
SF3B3-205ENST00000564899 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
SF3B3-205ENST00000564899 DBF4Q9UBU7 674 aaPredicted RBP14.12□□□□□ -0.15
SF3B3-205ENST00000564899 USP16Q9Y5T5 823 aa14.12□□□□□ -0.15
SF3B3-205ENST00000564899 C4AP0C0L4 1744 aa14.12□□□□□ -0.15
SF3B3-205ENST00000564899 MS4A1P11836 297 aa14.11□□□□□ -0.15
SF3B3-205ENST00000564899 TRIM27P14373 513 aa14.11□□□□□ -0.15
SF3B3-205ENST00000564899 PDE3AQ14432 1141 aa14.11□□□□□ -0.15
SF3B3-205ENST00000564899 FTSJ3Q8IY81 847 aaKnown RBP14.11□□□□□ -0.15
SF3B3-205ENST00000564899 ARHGAP45Q92619 1136 aa14.11□□□□□ -0.15
SF3B3-205ENST00000564899 API5Q9BZZ5 524 aaKnown RBP14.11□□□□□ -0.15
SF3B3-205ENST00000564899 TNNQ9UQP3 1299 aa14.11□□□□□ -0.15
SF3B3-205ENST00000564899 PTPRCP08575 1304 aa14.11□□□□□ -0.15
SF3B3-205ENST00000564899 MYH14Q7Z406 1995 aaKnown RBP14.11□□□□□ -0.15
SF3B3-205ENST00000564899 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
SF3B3-205ENST00000564899 LAMB4A4D0S4 1761 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 FLIIQ13045 1269 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 C9orf131Q5VYM1 1079 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 G2E3Q7L622 706 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 DNAJC10Q8IXB1 793 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 CLUAP1Q96AJ1 413 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 KLRG1Q96E93 195 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
SF3B3-205ENST00000564899 DDX21Q9NR30 783 aaKnown RBP eCLIP14.1□□□□□ -0.15
SF3B3-205ENST00000564899 ERBB4Q15303 1308 aa14.1□□□□□ -0.15
SF3B3-205ENST00000564899 STARD3NLO95772 234 aa14.09□□□□□ -0.15
SF3B3-205ENST00000564899 ANXA1P04083 346 aa14.09□□□□□ -0.15
SF3B3-205ENST00000564899 GYS1P13807 737 aa14.09□□□□□ -0.15
SF3B3-205ENST00000564899 PROSER3Q2NL68 480 aa14.09□□□□□ -0.15
SF3B3-205ENST00000564899 DZIP1LQ8IYY4 767 aaKnown RBP14.09□□□□□ -0.15
SF3B3-205ENST00000564899 JMYQ8N9B5 988 aa14.09□□□□□ -0.15
SF3B3-205ENST00000564899 PANK1Q8TE04 598 aa14.09□□□□□ -0.15
SF3B3-205ENST00000564899 HYPKQ9NX55 129 aa14.09□□□□□ -0.15
SF3B3-205ENST00000564899 ARFGEF1Q9Y6D6 1849 aa14.08□□□□□ -0.15
SF3B3-205ENST00000564899 TGFB2P61812 414 aa14.08□□□□□ -0.16
SF3B3-205ENST00000564899 PDIA6Q15084 440 aa14.08□□□□□ -0.16
SF3B3-205ENST00000564899 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
SF3B3-205ENST00000564899 ARHGEF1Q92888 912 aaKnown RBP14.08□□□□□ -0.16
SF3B3-205ENST00000564899 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
SF3B3-205ENST00000564899 PHAXQ9H814 394 aaKnown RBP14.08□□□□□ -0.16
SF3B3-205ENST00000564899 RLBP1P12271 317 aa14.07□□□□□ -0.16
SF3B3-205ENST00000564899 MYL6BP14649 208 aa14.07□□□□□ -0.16
SF3B3-205ENST00000564899 FKBP5Q13451 457 aaPredicted RBP14.07□□□□□ -0.16
SF3B3-205ENST00000564899 ERICH6BQ5W0A0 696 aa14.07□□□□□ -0.16
SF3B3-205ENST00000564899 ABCC4O15439 1325 aa14.07□□□□□ -0.16
SF3B3-205ENST00000564899 A1BGP04217 495 aa14.06□□□□□ -0.16
SF3B3-205ENST00000564899 CYP19A1P11511 503 aaPredicted RBP14.06□□□□□ -0.16
SF3B3-205ENST00000564899 PIP4K2AP48426 406 aaPredicted RBP14.06□□□□□ -0.16
SF3B3-205ENST00000564899 EXOC6Q8TAG9 804 aa14.06□□□□□ -0.16
SF3B3-205ENST00000564899 SRP68Q9UHB9 627 aaKnown RBP14.06□□□□□ -0.16
SF3B3-205ENST00000564899 COG6Q9Y2V7 657 aa14.06□□□□□ -0.16
SF3B3-205ENST00000564899 SBF1O95248 1867 aa14.06□□□□□ -0.16
SF3B3-205ENST00000564899 TJP1Q07157 1748 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 NBPF26B4DH59 902 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 CHRNA5P30532 468 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 PRELPP51888 382 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 DDR1Q08345 913 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 MVPQ14764 893 aaKnown RBP14.05□□□□□ -0.16
SF3B3-205ENST00000564899 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 NBPF10Q6P3W6 841 aaKnown RBP14.05□□□□□ -0.16
SF3B3-205ENST00000564899 NBPF15Q8N660 670 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 RRAGCQ9HB90 399 aa14.05□□□□□ -0.16
SF3B3-205ENST00000564899 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
SF3B3-205ENST00000564899 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
SF3B3-205ENST00000564899 LRP10Q7Z4F1 713 aa14.04□□□□□ -0.16
SF3B3-205ENST00000564899 ITPRIPQ8IWB1 547 aa14.04□□□□□ -0.16
SF3B3-205ENST00000564899 TMEM57Q8N5G2 664 aa14.04□□□□□ -0.16
SF3B3-205ENST00000564899 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
SF3B3-205ENST00000564899 RNF181Q9P0P0 153 aa14.04□□□□□ -0.16
SF3B3-205ENST00000564899 ZNF831Q5JPB2 1677 aa14.04□□□□□ -0.16
SF3B3-205ENST00000564899 F6X3S4 739 aa14.03□□□□□ -0.16
SF3B3-205ENST00000564899 DDX58O95786 925 aaKnown RBP14.03□□□□□ -0.16
SF3B3-205ENST00000564899 RASSF7Q02833 373 aa14.03□□□□□ -0.16
SF3B3-205ENST00000564899 COPS6Q7L5N1 327 aa14.03□□□□□ -0.16
SF3B3-205ENST00000564899 TNS4Q8IZW8 715 aa14.03□□□□□ -0.16
SF3B3-205ENST00000564899 NLGN1Q8N2Q7 840 aa14.03□□□□□ -0.16
SF3B3-205ENST00000564899 CCDC87Q9NVE4 849 aa14.03□□□□□ -0.16
SF3B3-205ENST00000564899 ZBTB1Q9Y2K1 713 aa14.03□□□□□ -0.16
SF3B3-205ENST00000564899 TNRC6CQ9HCJ0 1690 aaKnown RBP14.02□□□□□ -0.16
SF3B3-205ENST00000564899 CNTNAP4Q9C0A0 1308 aa14.02□□□□□ -0.17
SF3B3-205ENST00000564899 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.17
SF3B3-205ENST00000564899 CRKLP46109 303 aaKnown RBP14.02□□□□□ -0.17
SF3B3-205ENST00000564899 SLC4A10Q6U841 1118 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms