RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 LTBP3Q9NS15 1303 aa22.14■■□□□ 1.14
CCNF-203ENST00000564236 SRGNP10124 158 aa22.14■■□□□ 1.13
CCNF-203ENST00000564236 EIF4A1P60842 406 aaKnown RBP22.14■■□□□ 1.13
CCNF-203ENST00000564236 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
CCNF-203ENST00000564236 CNKSR1Q969H4 720 aa22.13■■□□□ 1.13
CCNF-203ENST00000564236 MAPK8IP3Q9UPT6 1336 aa22.12■■□□□ 1.13
CCNF-203ENST00000564236 DLG5Q8TDM6 1919 aa22.12■■□□□ 1.13
CCNF-203ENST00000564236 TNRC6CQ9HCJ0 1690 aaKnown RBP22.12■■□□□ 1.13
CCNF-203ENST00000564236 ZNF622Q969S3 477 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCNF-203ENST00000564236 MASTLQ96GX5 879 aa22.12■■□□□ 1.13
CCNF-203ENST00000564236 GLTPD2A6NH11 291 aa22.11■■□□□ 1.13
CCNF-203ENST00000564236 APLP1P51693 650 aa22.11■■□□□ 1.13
CCNF-203ENST00000564236 FSTL1Q12841 308 aa22.11■■□□□ 1.13
CCNF-203ENST00000564236 NBPF5PQ86XG9 351 aaPredicted RBP22.11■■□□□ 1.13
CCNF-203ENST00000564236 CCDC24Q8N4L8 307 aa22.11■■□□□ 1.13
CCNF-203ENST00000564236 ERVV-1B6SEH8 477 aa22.1■■□□□ 1.13
CCNF-203ENST00000564236 BABAM1Q9NWV8 329 aa22.1■■□□□ 1.13
CCNF-203ENST00000564236 ERBB4Q15303 1308 aa22.09■■□□□ 1.13
CCNF-203ENST00000564236 SOGA3Q5TF21 947 aa22.09■■□□□ 1.13
CCNF-203ENST00000564236 TPTE2Q6XPS3 522 aa22.09■■□□□ 1.13
CCNF-203ENST00000564236 THUMPD2Q9BTF0 503 aaKnown RBP22.09■■□□□ 1.13
CCNF-203ENST00000564236 NIP7Q9Y221 180 aaKnown RBP eCLIP22.09■■□□□ 1.13
CCNF-203ENST00000564236 ARFGEF2Q9Y6D5 1785 aa22.08■■□□□ 1.13
CCNF-203ENST00000564236 C21orf2O43822 256 aa22.08■■□□□ 1.13
CCNF-203ENST00000564236 HLFQ16534 295 aa22.08■■□□□ 1.13
CCNF-203ENST00000564236 PRPF40BQ6NWY9 871 aaKnown RBP22.08■■□□□ 1.13
CCNF-203ENST00000564236 C7orf43Q8WVR3 580 aa22.08■■□□□ 1.13
CCNF-203ENST00000564236 MYBBP1AQ9BQG0 1328 aaKnown RBP22.07■■□□□ 1.12
CCNF-203ENST00000564236 FER1L6Q2WGJ9 1857 aa22.07■■□□□ 1.12
CCNF-203ENST00000564236 NPHP1O15259 732 aa22.07■■□□□ 1.12
CCNF-203ENST00000564236 C16orf71Q8IYS4 520 aaPredicted RBP22.07■■□□□ 1.12
CCNF-203ENST00000564236 RRAGCQ9HB90 399 aa22.07■■□□□ 1.12
CCNF-203ENST00000564236 NPR1P16066 1061 aa22.06■■□□□ 1.12
CCNF-203ENST00000564236 IBTKQ9P2D0 1353 aaPredicted RBP22.06■■□□□ 1.12
CCNF-203ENST00000564236 TIAM2Q8IVF5 1701 aa22.06■■□□□ 1.12
CCNF-203ENST00000564236 MAP3K15Q6ZN16 1313 aa22.06■■□□□ 1.12
CCNF-203ENST00000564236 DNAJC5GQ8N7S2 189 aa22.05■■□□□ 1.12
CCNF-203ENST00000564236 TAOK3Q9H2K8 898 aa22.05■■□□□ 1.12
CCNF-203ENST00000564236 RIC1Q4ADV7 1423 aa22.05■■□□□ 1.12
CCNF-203ENST00000564236 VEGFAP15692 232 aaPredicted RBP22.04■■□□□ 1.12
CCNF-203ENST00000564236 TMPOP42166 694 aaKnown RBP22.04■■□□□ 1.12
CCNF-203ENST00000564236 RIPK4P57078 832 aa22.04■■□□□ 1.12
CCNF-203ENST00000564236 LMOD3Q0VAK6 560 aa22.04■■□□□ 1.12
CCNF-203ENST00000564236 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
CCNF-203ENST00000564236 CRY2Q49AN0 593 aa22.03■■□□□ 1.12
CCNF-203ENST00000564236 LRP10Q7Z4F1 713 aa22.03■■□□□ 1.12
CCNF-203ENST00000564236 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
CCNF-203ENST00000564236 SMC1BQ8NDV3 1235 aa22.02■■□□□ 1.12
CCNF-203ENST00000564236 NYXQ9GZU5 481 aa22.02■■□□□ 1.12
CCNF-203ENST00000564236 TSPYL4Q9UJ04 414 aa22.02■■□□□ 1.12
CCNF-203ENST00000564236 WDR90Q96KV7 1748 aa22.02■■□□□ 1.12
CCNF-203ENST00000564236 POTECB2RU33 542 aa22.01■■□□□ 1.11
CCNF-203ENST00000564236 ERFEQ4G0M1 354 aa22.01■■□□□ 1.11
CCNF-203ENST00000564236 DPY19L2Q6NUT2 758 aa22.01■■□□□ 1.11
CCNF-203ENST00000564236 TTLL7Q6ZT98 887 aa22.01■■□□□ 1.11
CCNF-203ENST00000564236 PDIA6Q15084 440 aa22■■□□□ 1.11
CCNF-203ENST00000564236 CCDC93Q567U6 631 aa22■■□□□ 1.11
CCNF-203ENST00000564236 KIF6Q6ZMV9 814 aa22■■□□□ 1.11
CCNF-203ENST00000564236 ZNF219Q9P2Y4 722 aaPredicted RBP22■■□□□ 1.11
CCNF-203ENST00000564236 RRP7AQ9Y3A4 280 aaKnown RBP22■■□□□ 1.11
CCNF-203ENST00000564236 SNED1Q8TER0 1413 aa21.99■■□□□ 1.11
CCNF-203ENST00000564236 GIGYF2Q6Y7W6 1299 aaKnown RBP21.99■■□□□ 1.11
CCNF-203ENST00000564236 ZNF34Q8IZ26 560 aa21.99■■□□□ 1.11
CCNF-203ENST00000564236 DICER1Q9UPY3 1922 aaKnown RBP21.99■■□□□ 1.11
CCNF-203ENST00000564236 UBN2Q6ZU65 1347 aa21.99■■□□□ 1.11
CCNF-203ENST00000564236 ABCC12Q96J65 1359 aa21.99■■□□□ 1.11
CCNF-203ENST00000564236 ALDH1B1P30837 517 aa21.98■■□□□ 1.11
CCNF-203ENST00000564236 MYL6BP14649 208 aa21.97■■□□□ 1.11
CCNF-203ENST00000564236 FKBP4Q02790 459 aaKnown RBP eCLIP21.97■■□□□ 1.11
CCNF-203ENST00000564236 NGEFQ8N5V2 710 aa21.97■■□□□ 1.11
CCNF-203ENST00000564236 CHL1O00533 1208 aa21.96■■□□□ 1.11
CCNF-203ENST00000564236 HOXA10P31260 410 aaPredicted RBP21.96■■□□□ 1.11
CCNF-203ENST00000564236 RTKN2Q8IZC4 609 aa21.96■■□□□ 1.11
CCNF-203ENST00000564236 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
CCNF-203ENST00000564236 CCDC88AQ3V6T2 1871 aa21.96■■□□□ 1.11
CCNF-203ENST00000564236 NUP98P52948 1817 aa21.95■■□□□ 1.1
CCNF-203ENST00000564236 GTF2E1P29083 439 aaPredicted RBP21.95■■□□□ 1.1
CCNF-203ENST00000564236 ZBTB3Q9H5J0 574 aa21.95■■□□□ 1.1
CCNF-203ENST00000564236 TRIM35Q9UPQ4 493 aa21.95■■□□□ 1.1
CCNF-203ENST00000564236 FAM177BA6PVY3 158 aa21.94■■□□□ 1.1
CCNF-203ENST00000564236 NTSR2O95665 410 aa21.94■■□□□ 1.1
CCNF-203ENST00000564236 PARP10Q53GL7 1025 aa21.94■■□□□ 1.1
CCNF-203ENST00000564236 SUSD4Q5VX71 490 aa21.94■■□□□ 1.1
CCNF-203ENST00000564236 NUTM1Q86Y26 1132 aa21.94■■□□□ 1.1
CCNF-203ENST00000564236 CC2D2BQ6DHV5 1058 aa21.93■■□□□ 1.1
CCNF-203ENST00000564236 L3MBTL3Q96JM7 780 aaPredicted RBP21.93■■□□□ 1.1
CCNF-203ENST00000564236 PRKRIP1Q9H875 184 aaPredicted RBP21.93■■□□□ 1.1
CCNF-203ENST00000564236 RNF123Q5XPI4 1314 aa21.92■■□□□ 1.1
CCNF-203ENST00000564236 JMYQ8N9B5 988 aa21.92■■□□□ 1.1
CCNF-203ENST00000564236 KLRG1Q96E93 195 aa21.92■■□□□ 1.1
CCNF-203ENST00000564236 PSMD1Q99460 953 aa21.92■■□□□ 1.1
CCNF-203ENST00000564236 ADAMTS8Q9UP79 889 aa21.92■■□□□ 1.1
CCNF-203ENST00000564236 HOXB7P09629 217 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 GPTP24298 496 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 WDR43Q15061 677 aaKnown RBP eCLIP21.91■■□□□ 1.1
CCNF-203ENST00000564236 PROSER3Q2NL68 480 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 GRIPAP1Q4V328 841 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 SLC10A5Q5PT55 438 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 PPP1R42Q7Z4L9 355 aa21.91■■□□□ 1.1
CCNF-203ENST00000564236 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms